RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 SYT17Q9BSW7 474 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 SERPINA10Q9UK55 444 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.23□□□□□ -0.61
VTA1-201ENST00000367621 ZNF646O15015 1829 aaPredicted RBP11.23□□□□□ -0.61
VTA1-201ENST00000367621 SCN9AQ15858 1988 aa11.23□□□□□ -0.61
VTA1-201ENST00000367621 MINDY4BA8MYZ0 360 aa11.22□□□□□ -0.61
VTA1-201ENST00000367621 B4E1Z4 1266 aa11.22□□□□□ -0.61
VTA1-201ENST00000367621 PRC1O43663 620 aa11.22□□□□□ -0.61
VTA1-201ENST00000367621 BRCA1P38398 1863 aaKnown RBP11.22□□□□□ -0.61
VTA1-201ENST00000367621 MAPKAPK5Q8IW41 473 aa11.22□□□□□ -0.61
VTA1-201ENST00000367621 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
VTA1-201ENST00000367621 TEX11Q8IYF3 940 aa11.22□□□□□ -0.61
VTA1-201ENST00000367621 WDR19Q8NEZ3 1342 aa11.22□□□□□ -0.61
VTA1-201ENST00000367621 TEKT1Q969V4 418 aa11.22□□□□□ -0.61
VTA1-201ENST00000367621 ZSCAN31Q96LW9 406 aaPredicted RBP11.22□□□□□ -0.61
VTA1-201ENST00000367621 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
VTA1-201ENST00000367621 DDX4Q9NQI0 724 aaKnown RBP11.22□□□□□ -0.61
VTA1-201ENST00000367621 TIAM2Q8IVF5 1701 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 FLT1P17948 1338 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 MCM5P33992 734 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 PLCD1P51178 756 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 ANKRD1Q15327 319 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 MFSD6Q6ZSS7 791 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 IGDCC4Q8TDY8 1250 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 BRF1Q92994 677 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 WNT2BQ93097 391 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 INTS4Q96HW7 963 aaKnown RBP11.21□□□□□ -0.61
VTA1-201ENST00000367621 ZBED3Q96IU2 234 aaPredicted RBP11.21□□□□□ -0.61
VTA1-201ENST00000367621 NOL10Q9BSC4 688 aaKnown RBP11.21□□□□□ -0.61
VTA1-201ENST00000367621 SENP2Q9HC62 589 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 SH2B1Q9NRF2 756 aaPredicted RBP11.21□□□□□ -0.61
VTA1-201ENST00000367621 USP40Q9NVE5 1235 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 MCM9Q9NXL9 1143 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 ZSWIM5Q9P217 1185 aa11.21□□□□□ -0.61
VTA1-201ENST00000367621 ARPP21Q9UBL0 812 aaPredicted RBP11.21□□□□□ -0.61
VTA1-201ENST00000367621 ROBO3Q96MS0 1386 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 MYO3BQ8WXR4 1341 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 FZD9O00144 591 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 SH2B2O14492 632 aaPredicted RBP11.2□□□□□ -0.62
VTA1-201ENST00000367621 ORC4O43929 436 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 KDM4AO75164 1064 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 USP5P45974 858 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 APOBRQ0VD83 1088 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 NFIAQ12857 509 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 CFAP100Q494V2 611 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 RALYLQ86SE5 291 aaKnown RBP11.2□□□□□ -0.62
VTA1-201ENST00000367621 ZFPM1Q8IX07 1006 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 STK11IPQ8N1F8 1099 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 AGBL3Q8NEM8 1001 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 ZDHHC16Q969W1 377 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 DYNLL2Q96FJ2 89 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 PRMT6Q96LA8 375 aaPredicted RBP11.2□□□□□ -0.62
VTA1-201ENST00000367621 RNF41Q9H4P4 317 aaPredicted RBP11.2□□□□□ -0.62
VTA1-201ENST00000367621 CNNM2Q9H8M5 875 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 SAP30BPQ9UHR5 308 aaKnown RBP11.2□□□□□ -0.62
VTA1-201ENST00000367621 BRPF3Q9ULD4 1205 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
VTA1-201ENST00000367621 MYH13Q9UKX3 1938 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 GOLGB1Q14789 3259 aaKnown RBP11.19□□□□□ -0.62
VTA1-201ENST00000367621 GOLGA8CPA6NN73 597 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 PFKFB2O60825 505 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 PRDM1O75626 825 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 YBX3P16989 372 aaKnown RBP eCLIP11.19□□□□□ -0.621e-7■■■■□ 23.4
VTA1-201ENST00000367621 PDIA3P30101 505 aaKnown RBP11.19□□□□□ -0.62
VTA1-201ENST00000367621 TRDNQ13061 729 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 MTMR14Q8NCE2 650 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 JDP2Q8WYK2 163 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 ZNF274Q96GC6 653 aaPredicted RBP11.19□□□□□ -0.62
VTA1-201ENST00000367621 IDI2Q9BXS1 227 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 KRT23Q9C075 422 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 LY9Q9HBG7 655 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 FAM198AQ9UFP1 575 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 FER1L6Q2WGJ9 1857 aa11.19□□□□□ -0.62
VTA1-201ENST00000367621 SHTN1A0MZ66 631 aa11.18□□□□□ -0.62
VTA1-201ENST00000367621 EVI5O60447 810 aa11.18□□□□□ -0.62
VTA1-201ENST00000367621 DTNBO60941 627 aa11.18□□□□□ -0.62
VTA1-201ENST00000367621 PCP11498 1178 aaKnown RBP11.18□□□□□ -0.62
VTA1-201ENST00000367621 ZNF280AP59817 542 aaPredicted RBP11.18□□□□□ -0.62
VTA1-201ENST00000367621 GABPAQ06546 454 aa11.18□□□□□ -0.62
VTA1-201ENST00000367621 SLC4A8Q2Y0W8 1093 aa11.18□□□□□ -0.62
VTA1-201ENST00000367621 RRP12Q5JTH9 1297 aaKnown RBP11.18□□□□□ -0.62
VTA1-201ENST00000367621 SH3BP5LQ7L8J4 393 aa11.18□□□□□ -0.62
VTA1-201ENST00000367621 CCDC83Q8IWF9 413 aa11.18□□□□□ -0.62
VTA1-201ENST00000367621 TMEM87BQ96K49 555 aa11.18□□□□□ -0.62
VTA1-201ENST00000367621 MTA3Q9BTC8 594 aa11.18□□□□□ -0.62
VTA1-201ENST00000367621 CWC22Q9HCG8 908 aaKnown RBP11.18□□□□□ -0.62
VTA1-201ENST00000367621 ZNF541Q9H0D2 1346 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 CTDNEP1O95476 244 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 POLR3DP05423 398 aaPredicted RBP11.17□□□□□ -0.62
VTA1-201ENST00000367621 LIFRP42702 1097 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 CACNB3P54284 484 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 SCRN1Q12765 414 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 PICALMQ13492 652 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 SEC23AQ15436 765 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 ARHGAP27Q6ZUM4 889 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 C16orf86Q6ZW13 317 aa11.17□□□□□ -0.62
VTA1-201ENST00000367621 SGMS1Q86VZ5 419 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms