RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 RNF208Q9H0X6 261 aa10.95□□□□□ -0.66
H3F3A-201ENST00000366813 CASZ1Q86V15 1759 aa10.95□□□□□ -0.66
H3F3A-201ENST00000366813 SPATA31A1Q5TZJ5 1347 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 PRELPP51888 382 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 IKBKEQ14164 716 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 ANKRD34AQ69YU3 496 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 FDX2Q6P4F2 183 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 WAPLQ7Z5K2 1190 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 ASAP3Q8TDY4 903 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 ZKSCAN3Q9BRR0 538 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 KCNF1Q9H3M0 494 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 BIN2Q9UBW5 565 aaPredicted RBP10.94□□□□□ -0.66
H3F3A-201ENST00000366813 SOX13Q9UN79 622 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 IQGAP3Q86VI3 1631 aa10.94□□□□□ -0.66
H3F3A-201ENST00000366813 DLC1Q96QB1 1528 aa10.93□□□□□ -0.66
H3F3A-201ENST00000366813 ARHGAP4P98171 946 aa10.93□□□□□ -0.66
H3F3A-201ENST00000366813 MYRFLQ96LU7 910 aa10.93□□□□□ -0.66
H3F3A-201ENST00000366813 USP35Q9P2H5 1018 aa10.93□□□□□ -0.66
H3F3A-201ENST00000366813 FOXD3Q9UJU5 478 aaPredicted RBP10.93□□□□□ -0.66
H3F3A-201ENST00000366813 TRIM42Q8IWZ5 723 aa10.92□□□□□ -0.66
H3F3A-201ENST00000366813 C7orf69Q9H7B7 122 aa10.92□□□□□ -0.66
H3F3A-201ENST00000366813 CCDC87Q9NVE4 849 aa10.92□□□□□ -0.66
H3F3A-201ENST00000366813 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
H3F3A-201ENST00000366813 ARHGEF10O15013 1369 aa10.91□□□□□ -0.66
H3F3A-201ENST00000366813 HMX2A2RU54 273 aa10.91□□□□□ -0.66
H3F3A-201ENST00000366813 SOX1O00570 391 aaPredicted RBP10.91□□□□□ -0.66
H3F3A-201ENST00000366813 FZD6O60353 706 aa10.91□□□□□ -0.66
H3F3A-201ENST00000366813 BMP3P12645 472 aa10.91□□□□□ -0.66
H3F3A-201ENST00000366813 NFIAQ12857 509 aa10.91□□□□□ -0.66
H3F3A-201ENST00000366813 CLEC10AQ8IUN9 316 aa10.91□□□□□ -0.66
H3F3A-201ENST00000366813 KRTAP4-8Q9BYQ9 185 aa10.91□□□□□ -0.66
H3F3A-201ENST00000366813 PRAG1Q86YV5 1406 aa10.91□□□□□ -0.66
H3F3A-201ENST00000366813 SBNO1A3KN83 1393 aa10.9□□□□□ -0.66
H3F3A-201ENST00000366813 COBLO75128 1261 aa10.9□□□□□ -0.66
H3F3A-201ENST00000366813 CCDC27Q2M243 656 aa10.9□□□□□ -0.66
H3F3A-201ENST00000366813 RNF43Q68DV7 783 aa10.9□□□□□ -0.66
H3F3A-201ENST00000366813 FAM20CQ8IXL6 584 aa10.9□□□□□ -0.66
H3F3A-201ENST00000366813 MTFR1LQ9H019 292 aa10.9□□□□□ -0.66
H3F3A-201ENST00000366813 STK26Q9P289 416 aa10.9□□□□□ -0.66
H3F3A-201ENST00000366813 NEXMIFQ5QGS0 1516 aa10.9□□□□□ -0.66
H3F3A-201ENST00000366813 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.66
H3F3A-201ENST00000366813 GAS2O43903 313 aaKnown RBP10.89□□□□□ -0.67
H3F3A-201ENST00000366813 NUTM2GQ5VZR2 741 aa10.89□□□□□ -0.67
H3F3A-201ENST00000366813 HGSNATQ68CP4 663 aa10.89□□□□□ -0.67
H3F3A-201ENST00000366813 BEND4Q6ZU67 534 aa10.89□□□□□ -0.67
H3F3A-201ENST00000366813 PTF1AQ7RTS3 328 aa10.89□□□□□ -0.67
H3F3A-201ENST00000366813 C12orf50Q8NA57 414 aaPredicted RBP10.89□□□□□ -0.67
H3F3A-201ENST00000366813 ZFYVE28Q9HCC9 887 aa10.89□□□□□ -0.67
H3F3A-201ENST00000366813 ATP10DQ9P241 1426 aa10.89□□□□□ -0.67
H3F3A-201ENST00000366813 COL14A1Q05707 1796 aaKnown RBP10.89□□□□□ -0.67
H3F3A-201ENST00000366813 PLSCR1O15162 318 aa10.88□□□□□ -0.67
H3F3A-201ENST00000366813 TGFB1P01137 390 aa10.88□□□□□ -0.67
H3F3A-201ENST00000366813 MFAP1P55081 439 aaKnown RBP10.88□□□□□ -0.67
H3F3A-201ENST00000366813 VN1R5Q7Z5H4 357 aa10.88□□□□□ -0.67
H3F3A-201ENST00000366813 DNAJC5GQ8N7S2 189 aa10.88□□□□□ -0.67
H3F3A-201ENST00000366813 ZNF526Q8TF50 670 aaPredicted RBP10.88□□□□□ -0.67
H3F3A-201ENST00000366813 FAM83CQ9BQN1 747 aa10.88□□□□□ -0.67
H3F3A-201ENST00000366813 USP26Q9BXU7 913 aa10.88□□□□□ -0.67
H3F3A-201ENST00000366813 PRDM11Q9NQV5 511 aa10.88□□□□□ -0.67
H3F3A-201ENST00000366813 TECPR2O15040 1411 aa10.88□□□□□ -0.67
H3F3A-201ENST00000366813 PLEKHH1Q9ULM0 1364 aa10.88□□□□□ -0.67
H3F3A-201ENST00000366813 MEGF11A6BM72 1044 aa10.87□□□□□ -0.67
H3F3A-201ENST00000366813 GRIK1P39086 918 aa10.87□□□□□ -0.67
H3F3A-201ENST00000366813 PREPP48147 710 aa10.87□□□□□ -0.67
H3F3A-201ENST00000366813 CHRNA2Q15822 529 aa10.87□□□□□ -0.67
H3F3A-201ENST00000366813 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.87□□□□□ -0.67
H3F3A-201ENST00000366813 LATS2Q9NRM7 1088 aa10.87□□□□□ -0.67
H3F3A-201ENST00000366813 STK32BQ9NY57 414 aa10.87□□□□□ -0.67
H3F3A-201ENST00000366813 KIF1AQ12756 1690 aa10.87□□□□□ -0.67
H3F3A-201ENST00000366813 MAP3K5Q99683 1374 aa10.87□□□□□ -0.67
H3F3A-201ENST00000366813 POLR3DP05423 398 aaPredicted RBP10.86□□□□□ -0.67
H3F3A-201ENST00000366813 CD97P48960 835 aa10.86□□□□□ -0.67
H3F3A-201ENST00000366813 SLC15A2Q16348 729 aa10.86□□□□□ -0.67
H3F3A-201ENST00000366813 GJD3Q8N144 294 aa10.86□□□□□ -0.67
H3F3A-201ENST00000366813 DBNDD2Q9BQY9 259 aa10.86□□□□□ -0.67
H3F3A-201ENST00000366813 BRPF3Q9ULD4 1205 aa10.86□□□□□ -0.67
H3F3A-201ENST00000366813 HIF3AQ9Y2N7 669 aa10.86□□□□□ -0.67
H3F3A-201ENST00000366813 ZDHHC13Q8IUH4 622 aa10.85□□□□□ -0.67
H3F3A-201ENST00000366813 PMFBP1Q8TBY8 1022 aa10.85□□□□□ -0.67
H3F3A-201ENST00000366813 BHLHE41Q9C0J9 482 aaPredicted RBP10.85□□□□□ -0.67
H3F3A-201ENST00000366813 CYP4F12Q9HCS2 524 aa10.85□□□□□ -0.67
H3F3A-201ENST00000366813 NUP155O75694 1391 aa10.85□□□□□ -0.67
H3F3A-201ENST00000366813 GSTM4Q03013 218 aa10.84□□□□□ -0.67
H3F3A-201ENST00000366813 PEAR1Q5VY43 1037 aaPredicted RBP10.84□□□□□ -0.67
H3F3A-201ENST00000366813 INTS5Q6P9B9 1019 aaKnown RBP10.84□□□□□ -0.67
H3F3A-201ENST00000366813 DCTN4Q9UJW0 460 aa10.84□□□□□ -0.67
H3F3A-201ENST00000366813 EIF4EBP3O60516 100 aaPredicted RBP10.84□□□□□ -0.67
H3F3A-201ENST00000366813 NEFLP07196 543 aa10.84□□□□□ -0.67
H3F3A-201ENST00000366813 ESRRAP11474 423 aaPredicted RBP10.84□□□□□ -0.67
H3F3A-201ENST00000366813 YBX3P16989 372 aaKnown RBP eCLIP10.84□□□□□ -0.679e-12■■■□□ 16.6
H3F3A-201ENST00000366813 NLGN2Q8NFZ4 835 aa10.84□□□□□ -0.67
H3F3A-201ENST00000366813 SOX17Q9H6I2 414 aaPredicted RBP10.84□□□□□ -0.67
H3F3A-201ENST00000366813 FMN2Q9NZ56 1722 aa10.83□□□□□ -0.68
H3F3A-201ENST00000366813 NRXN1Q9ULB1 1477 aa10.83□□□□□ -0.68
H3F3A-201ENST00000366813 MED26O95402 600 aa10.83□□□□□ -0.68
H3F3A-201ENST00000366813 EVA1CP58658 441 aa10.83□□□□□ -0.68
H3F3A-201ENST00000366813 EXOSC6Q5RKV6 272 aaKnown RBP10.83□□□□□ -0.68
H3F3A-201ENST00000366813 KIAA0232Q92628 1395 aa10.82□□□□□ -0.68
H3F3A-201ENST00000366813 RGPD8O14715 1765 aaPredicted RBP10.82□□□□□ -0.68
H3F3A-201ENST00000366813 METTL12A8MUP2 240 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms