RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 TRIM29Q14134 588 aa22.33■■□□□ 1.17
TRIM58-201ENST00000366481 SLC12A7Q9Y666 1083 aa22.33■■□□□ 1.17
TRIM58-201ENST00000366481 ZMYM6O95789 1325 aa22.33■■□□□ 1.17
TRIM58-201ENST00000366481 RIC1Q4ADV7 1423 aa22.33■■□□□ 1.17
TRIM58-201ENST00000366481 AKAP17AQ02040 695 aaKnown RBP22.33■■□□□ 1.16
TRIM58-201ENST00000366481 RASGRF1Q13972 1273 aa22.33■■□□□ 1.16
TRIM58-201ENST00000366481 SRGAP1Q7Z6B7 1085 aa22.33■■□□□ 1.16
TRIM58-201ENST00000366481 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.33■■□□□ 1.16
TRIM58-201ENST00000366481 CARD10Q9BWT7 1032 aa22.33■■□□□ 1.16
TRIM58-201ENST00000366481 UBN2Q6ZU65 1347 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 TFRCP02786 760 aaKnown RBP22.32■■□□□ 1.16
TRIM58-201ENST00000366481 PDE4BQ07343 736 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 FCHSD1Q86WN1 690 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 MICALL1Q8N3F8 863 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 STRBPQ96SI9 672 aaKnown RBP22.32■■□□□ 1.16
TRIM58-201ENST00000366481 FAM217BQ9NTX9 383 aaPredicted RBP22.32■■□□□ 1.16
TRIM58-201ENST00000366481 NFE2L3Q9Y4A8 694 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 MINDY4BA8MYZ0 360 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 TDO2P48775 406 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 SPECC1LQ69YQ0 1117 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 PACS2Q86VP3 889 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 PPFIBP1Q86W92 1011 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 PCDHA5Q9Y5H7 936 aa22.32■■□□□ 1.16
TRIM58-201ENST00000366481 SOWAHDA6NJG2 315 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 MAGEA9P43362 315 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 SLC4A8Q2Y0W8 1093 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 KLHL10Q6JEL2 608 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 CPLX2Q6PUV4 134 aaKnown RBP22.31■■□□□ 1.16
TRIM58-201ENST00000366481 IGDCC4Q8TDY8 1250 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 LY9Q9HBG7 655 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 ABCF2Q9UG63 623 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 STX10O60499 249 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 USP49Q70CQ1 688 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 IFNL3Q8IZI9 196 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 JMYQ8N9B5 988 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 GDAP1L1Q96MZ0 367 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 RABEP2Q9H5N1 569 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 GLI3P10071 1580 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 COL18A1P39060 1754 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 COBLO75128 1261 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 CASP1P29466 404 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 METTL16Q86W50 562 aaKnown RBP22.31■■□□□ 1.16
TRIM58-201ENST00000366481 DZIP3Q86Y13 1208 aaKnown RBP22.31■■□□□ 1.16
TRIM58-201ENST00000366481 HSD3B7Q9H2F3 369 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 ACBD3Q9H3P7 528 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 MRPL44Q9H9J2 332 aaKnown RBP22.31■■□□□ 1.16
TRIM58-201ENST00000366481 PSD3Q9NYI0 1048 aa22.31■■□□□ 1.16
TRIM58-201ENST00000366481 KCPQ6ZWJ8 1503 aa22.3■■□□□ 1.16
TRIM58-201ENST00000366481 LCORLQ8N3X6 602 aa22.3■■□□□ 1.16
TRIM58-201ENST00000366481 CEP112Q8N8E3 955 aa22.3■■□□□ 1.16
TRIM58-201ENST00000366481 RGS22Q8NE09 1264 aa22.3■■□□□ 1.16
TRIM58-201ENST00000366481 SDR42E1Q8WUS8 393 aa22.3■■□□□ 1.16
TRIM58-201ENST00000366481 PNKPQ96T60 521 aa22.3■■□□□ 1.16
TRIM58-201ENST00000366481 KCNQ4P56696 695 aa22.3■■□□□ 1.16
TRIM58-201ENST00000366481 NKX1-1Q15270 411 aaPredicted RBP22.3■■□□□ 1.16
TRIM58-201ENST00000366481 FAM205CA6NFA0 338 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 CUTAO60888 179 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 PTPAQ15257 358 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 SPATA5Q8NB90 893 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 OXER1Q8TDS5 423 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 PPM1EQ8WY54 764 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 FAM204AQ9H8W3 233 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 KCNH3Q9ULD8 1083 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 PRDM1O75626 825 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 SMIM5Q71RC9 77 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 VGLL2Q8N8G2 317 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.29■■□□□ 1.16
TRIM58-201ENST00000366481 PRR29P0C7W0 189 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 NTRK3Q16288 839 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 HOOK1Q9UJC3 728 aaKnown RBP22.29■■□□□ 1.16
TRIM58-201ENST00000366481 SLC4A4Q9Y6R1 1079 aa22.29■■□□□ 1.16
TRIM58-201ENST00000366481 BMP6P22004 513 aa22.28■■□□□ 1.16
TRIM58-201ENST00000366481 BEND6Q5SZJ8 279 aaPredicted RBP22.28■■□□□ 1.16
TRIM58-201ENST00000366481 DIS3L2Q8IYB7 885 aaKnown RBP22.28■■□□□ 1.16
TRIM58-201ENST00000366481 CPDO75976 1380 aa22.28■■□□□ 1.16
TRIM58-201ENST00000366481 NWD2Q9ULI1 1742 aa22.28■■□□□ 1.16
TRIM58-201ENST00000366481 CYP2D7A0A087X1C5 515 aa22.28■■□□□ 1.16
TRIM58-201ENST00000366481 POLR2DO15514 142 aaKnown RBP22.28■■□□□ 1.16
TRIM58-201ENST00000366481 SSRP1Q08945 709 aaKnown RBP22.28■■□□□ 1.16
TRIM58-201ENST00000366481 CASP8Q14790 479 aa22.28■■□□□ 1.16
TRIM58-201ENST00000366481 COL5A2P05997 1499 aaPredicted RBP22.27■■□□□ 1.16
TRIM58-201ENST00000366481 CTAGE15A4D2H0 777 aa22.27■■□□□ 1.16
TRIM58-201ENST00000366481 CTAGE8P0CG41 777 aa22.27■■□□□ 1.16
TRIM58-201ENST00000366481 CTAGE6Q86UF2 777 aa22.27■■□□□ 1.16
TRIM58-201ENST00000366481 CTAGE4Q8IX94 777 aa22.27■■□□□ 1.16
TRIM58-201ENST00000366481 KIFC2Q96AC6 838 aa22.27■■□□□ 1.16
TRIM58-201ENST00000366481 CTAGE9A4FU28 777 aa22.27■■□□□ 1.16
TRIM58-201ENST00000366481 TRIM28Q13263 835 aaKnown RBP22.27■■□□□ 1.16
TRIM58-201ENST00000366481 TC2NQ8N9U0 490 aa22.27■■□□□ 1.16
TRIM58-201ENST00000366481 MAP3K14Q99558 947 aa22.27■■□□□ 1.16
TRIM58-201ENST00000366481 PCDHB6Q9Y5E3 794 aa22.27■■□□□ 1.16
TRIM58-201ENST00000366481 A0A0U1RQJ8 604 aa22.27■■□□□ 1.15
TRIM58-201ENST00000366481 POTEB2H3BUK9 544 aa22.27■■□□□ 1.15
TRIM58-201ENST00000366481 MFSD6Q6ZSS7 791 aa22.27■■□□□ 1.15
TRIM58-201ENST00000366481 ATRIPQ8WXE1 791 aa22.27■■□□□ 1.15
TRIM58-201ENST00000366481 LRP2BPQ9P2M1 347 aa22.27■■□□□ 1.15
TRIM58-201ENST00000366481 CDC23Q9UJX2 597 aa22.27■■□□□ 1.15
TRIM58-201ENST00000366481 KDM4FA0A1W2PPD8 638 aa22.26■■□□□ 1.15
TRIM58-201ENST00000366481 CYP19A1P11511 503 aaPredicted RBP22.26■■□□□ 1.15
TRIM58-201ENST00000366481 VSNL1P62760 191 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms