RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 TMEM63CQ9P1W3 806 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 MKRN1Q9UHC7 482 aaKnown RBP1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 ING1Q9UK53 422 aaPredicted RBP1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 LRFN2Q9ULH4 789 aa1.19□□□□□ -2.22
RNU6-54P-201ENST00000365563 LTBP3Q9NS15 1303 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 PROB1E7EW31 1015 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 TRPA1O75762 1119 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 DKK1O94907 266 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 B3GALT4O96024 378 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 PLATP00750 562 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 CTGFP29279 349 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZC3H6P61129 1189 aaKnown RBP1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 PLCB3Q01970 1234 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 MVKQ03426 396 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 LARP1Q6PKG0 1096 aaKnown RBP1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 LIPIQ6XZB0 460 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 GLCCI1Q86VQ1 547 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 TMEFF1Q8IYR6 380 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 AMER2Q8N7J2 671 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 ANKS4BQ8N8V4 417 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 TP53I13Q8NBR0 393 aaPredicted RBP1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 GPR152Q8TDT2 470 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 UBE2FQ969M7 185 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 ISL2Q96A47 359 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZG16BQ96DA0 208 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 RBM15Q96T37 977 aaKnown RBP eCLIP1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 TRIM56Q9BRZ2 755 aaKnown RBP1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZNF341Q9BYN7 854 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 ADAMTS10Q9H324 1103 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 GGNBP2Q9H3C7 697 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 C19orf44Q9H6X5 657 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 CNTD2Q9H8S5 307 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 DISC1Q9NRI5 854 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 KRT82Q9NSB4 513 aa1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 TPX2Q9ULW0 747 aaKnown RBP1.18□□□□□ -2.22
RNU6-54P-201ENST00000365563 A0A1W2PP55 124 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 KRTAP9-6A8MVA2 160 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 FFAR3O14843 346 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 ATP9BO43861 1147 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZGLP1P0C6A0 271 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 PFKLP17858 780 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 CYP7A1P22680 504 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 WEE1P30291 646 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 VIPR1P32241 457 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 KIR3DL1P43629 444 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 CDR1P51861 262 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 INHBCP55103 352 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 FGD1P98174 961 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 DPTQ07507 201 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 KIF4BQ2VIQ3 1234 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 EPHA10Q5JZY3 1008 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 COX20Q5RI15 118 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZNF362Q5T0B9 420 aaPredicted RBP1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 C16orf46Q6P387 395 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 GLB1LQ6UWU2 654 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 CREG2Q8IUH2 290 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 KCT2Q8NC54 265 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 RNF214Q8ND24 703 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 SHISA4Q96DD7 197 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZNF764Q96H86 408 aaPredicted RBP1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 LNPKQ9C0E8 428 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 TRIT1Q9H3H1 467 aaKnown RBP1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 ALG2Q9H553 416 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 GPBP1L1Q9HC44 474 aaPredicted RBP1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 PICK1Q9NRD5 415 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZSWIM5Q9P217 1185 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 CNTN3Q9P232 1028 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 ST14Q9Y5Y6 855 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 CAPN6Q9Y6Q1 641 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 NOTCH2Q04721 2471 aa1.17□□□□□ -2.22
RNU6-54P-201ENST00000365563 A0A087X1B8 175 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 A0A096LPE4 126 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 A0A1W2PPZ6 126 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 ECEL1O95672 775 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 EOMESO95936 686 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 ESR1P03372 595 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 NEFMP07197 916 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 LIG1P18858 919 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 MCM7P33993 719 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 ERVK-24P63145 666 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 PLCB2Q00722 1185 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 ZNF423Q2M1K9 1284 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 CDC37L1Q7L3B6 337 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 USP33Q8TEY7 942 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 DDX1Q92499 740 aaKnown RBP1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 NUDT16Q96DE0 195 aaKnown RBP1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 SPATA25Q9BR10 227 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 KLC2Q9H0B6 622 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 SEMA4AQ9H3S1 761 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 CCDC86Q9H6F5 360 aaKnown RBP1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 SP110Q9HB58 689 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 GDPD2Q9HCC8 539 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 CRTAC1Q9NQ79 661 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 ST6GALNAC2Q9UJ37 374 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 PCDHGC5Q9Y5F6 944 aa1.16□□□□□ -2.22
RNU6-54P-201ENST00000365563 PRR33A8MZF0 331 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 BUB1BO60566 1050 aaPredicted RBP1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 PHACTR2O75167 634 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 LRIG2O94898 1065 aa1.15□□□□□ -2.23
RNU6-54P-201ENST00000365563 FBLP22087 321 aaKnown RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms