RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CEP57Q86XR8 500 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 ZNF654Q8IZM8 581 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 ACRBPQ8NEB7 543 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 RABGGTAQ92696 567 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 NEFHP12036 1026 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 MICALCLQ6ZW33 695 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 FAN1Q9Y2M0 1017 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 IKBKBO14920 756 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 OPA1O60313 960 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 ZPR1O75312 459 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 PDE4DQ08499 809 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 E4F1Q66K89 784 aaPredicted RBP15.63■□□□□ 0.09
COL6A1-201ENST00000361866 ANKRD7Q92527 254 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 ZMYM6O95789 1325 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 MLH3Q9UHC1 1453 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 PHKA1P46020 1223 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 IRX2Q9BZI1 471 aaPredicted RBP15.63■□□□□ 0.09
COL6A1-201ENST00000361866 CSRNP2Q9H175 543 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 SMIM23A6NLE4 172 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 TUBBP07437 444 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL6A1-201ENST00000361866 RBL2Q08999 1139 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 CFAP58Q5T655 872 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 VSTM4Q8IW00 320 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 IFNL3Q8IZI9 196 aa15.63■□□□□ 0.09
COL6A1-201ENST00000361866 GOLGA6BA6NDN3 693 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 TTC19Q6DKK2 380 aaPredicted RBP15.62■□□□□ 0.09
COL6A1-201ENST00000361866 VPS36Q86VN1 386 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 ANKRD13CQ8N6S4 541 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 DPF2Q92785 391 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 FAM207AQ9NSI2 230 aaPredicted RBP15.62■□□□□ 0.09
COL6A1-201ENST00000361866 CDC23Q9UJX2 597 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 ZNF652Q9Y2D9 606 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 CRB1P82279 1406 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 GNAT2P19087 354 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 CCZ1BP86790 482 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 CCZ1P86791 482 aaPredicted RBP15.62■□□□□ 0.09
COL6A1-201ENST00000361866 SRGAP1Q7Z6B7 1085 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 ANKRD18AQ8IVF6 992 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 SAR1BQ9Y6B6 198 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 TLDC2A0PJX2 215 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 UBAP1LF5GYI3 381 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 IL2RBP14784 551 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 TICAM2Q86XR7 235 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 FANCBQ8NB91 859 aa15.62■□□□□ 0.09
COL6A1-201ENST00000361866 MORC2Q9Y6X9 1032 aaPredicted RBP15.62■□□□□ 0.09
COL6A1-201ENST00000361866 FAM47AQ5JRC9 791 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 SPATA5Q8NB90 893 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 MAN1B1Q9UKM7 699 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 A0A0G2JLW4 131 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 FOXN1O15353 648 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 CALML3P27482 149 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 SSR1P43307 286 aaKnown RBP15.61■□□□□ 0.09
COL6A1-201ENST00000361866 TUBB4BP68371 445 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 PUM3Q15397 648 aaKnown RBP15.61■□□□□ 0.09
COL6A1-201ENST00000361866 TOGARAM2Q6ZUX3 1019 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 CTDP1Q9Y5B0 961 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-201ENST00000361866 PTPROQ16827 1216 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 FUCA2Q9BTY2 467 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.61■□□□□ 0.09
COL6A1-201ENST00000361866 RTL9Q8NET4 1388 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 PHLPP2Q6ZVD8 1323 aa15.61■□□□□ 0.09
COL6A1-201ENST00000361866 SNAP23O00161 211 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 MAP2K1Q02750 393 aaPredicted RBP15.6■□□□□ 0.09
COL6A1-201ENST00000361866 KLHL34Q8N239 644 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 OR8K1Q8NGG5 319 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 SYMPKQ92797 1274 aaKnown RBP15.6■□□□□ 0.09
COL6A1-201ENST00000361866 IQGAP1P46940 1657 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 TCIRG1Q13488 830 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 SPATA1Q5VX52 437 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 ZNF287Q9HBT7 754 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 PCDHB6Q9Y5E3 794 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 CALRP27797 417 aaKnown RBP15.6■□□□□ 0.09
COL6A1-201ENST00000361866 MRPS25P82663 173 aaKnown RBP15.6■□□□□ 0.09
COL6A1-201ENST00000361866 GREM2Q9H772 168 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 KCNJ18B7U540 433 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 CTIFO43310 598 aaKnown RBP15.6■□□□□ 0.09
COL6A1-201ENST00000361866 KCNJ12Q14500 433 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 TYW1BQ6NUM6 668 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 C8orf74Q6P047 294 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 DYMQ7RTS9 669 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 EPSTI1Q96J88 318 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 OSBPL5Q9H0X9 879 aaPredicted RBP15.6■□□□□ 0.09
COL6A1-201ENST00000361866 FAM204AQ9H8W3 233 aa15.6■□□□□ 0.09
COL6A1-201ENST00000361866 TNNI2P48788 182 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 PLCD1P51178 756 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 PTGDRQ13258 359 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 ADAM21Q9UKJ8 722 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 EPN1Q9Y6I3 576 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-201ENST00000361866 ARHGEF40Q8TER5 1519 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 PRKAB2O43741 272 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 ARHGEF25Q86VW2 580 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 CCDC24Q8N4L8 307 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 SECISBP2LQ93073 1101 aaKnown RBP15.59■□□□□ 0.09
COL6A1-201ENST00000361866 NLRC4Q9NPP4 1024 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 TNKSO95271 1327 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 ADGRB3O60242 1522 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 CALM1P0DP23 149 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 CALM2P0DP24 149 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 CALM3P0DP25 149 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms