RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 ATG9AQ7Z3C6 839 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 CERS3Q8IU89 383 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 P2RX7Q99572 595 aaKnown RBP7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 ADAMTS8Q9UP79 889 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 RBM5P52756 815 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 C9orf50Q5SZB4 431 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 ANKRD13CQ8N6S4 541 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 BIN2Q9UBW5 565 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 TNKSO95271 1327 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 PRR33A8MZF0 331 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 SEPT4O43236 478 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 HERVK_113P62684 666 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 RAB30Q15771 203 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 AAK1Q2M2I8 961 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 TWISTNBQ3B726 338 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 MFSD14CQ5VZR4 134 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 CCDC174Q6PII3 467 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 ZFPM1Q8IX07 1006 aa7.55□□□□□ -1.2
CDC42SE2-201ENST00000360515 SNAP23O00161 211 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 LRFN3Q9BTN0 628 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 DDTLA6NHG4 134 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 F8W031 263 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 GLRX3O76003 335 aaKnown RBP7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 RGS3P49796 1198 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 USP17L2Q6R6M4 530 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 ZNF467Q7Z7K2 595 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 TXNRD2Q9NNW7 524 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 DDX4Q9NQI0 724 aaKnown RBP7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 FLRT1Q9NZU1 646 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 HCN4Q9Y3Q4 1203 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 TACC3Q9Y6A5 838 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 PTPRCP08575 1304 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 MROH7Q68CQ1 1323 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 TIMP1P01033 207 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 SYN1P17600 705 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 NUBP1P53384 320 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 GRIN2CQ14957 1233 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 SPTY2D1Q68D10 685 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 ZNF384Q8TF68 577 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 ZNF428Q96B54 188 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 UHRF1Q96T88 793 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 KIAA1683Q9H0B3 1180 aa7.54□□□□□ -1.2
CDC42SE2-201ENST00000360515 RANBP2P49792 3224 aaKnown RBP7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 ELP1O95163 1332 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 RGS20O76081 388 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 RRP1BQ14684 758 aaKnown RBP7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 CATSPERGQ6ZRH7 1159 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 JARID2Q92833 1246 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 SUCLG2Q96I99 432 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 USP40Q9NVE5 1235 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 MOXD2PA6NHM9 499 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 CD4P01730 458 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 IFIT1P09914 478 aaKnown RBP7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 MTX1Q13505 466 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 FOXP4Q8IVH2 680 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 MAGEB6Q8N7X4 407 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 CCDC85AQ96PX6 553 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 ZNF576Q9H609 170 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 CNNM1Q9NRU3 951 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 CENPFP49454 3210 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 EYA2O00167 538 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 CLTBP09497 229 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 DNAJB2P25686 324 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 ARID4AP29374 1257 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 PDE3AQ14432 1141 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 MFSD5Q6N075 450 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 GADL1Q6ZQY3 521 aa7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 PUS3Q9BZE2 481 aaKnown RBP7.53□□□□□ -1.2
CDC42SE2-201ENST00000360515 ADAMTS4O75173 837 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 ASNSP08243 561 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 COPB2P35606 906 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 CCNA1P78396 465 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 MAMDC4Q6UXC1 1216 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 WWC1Q8IX03 1113 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 MB21D1Q8N884 522 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 SMCR8Q8TEV9 937 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 MYH7P12883 1935 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 EPHB4P54760 987 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 FPGSQ05932 587 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 PSRC1Q6PGN9 363 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 MIGA2Q7L4E1 593 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 BADQ92934 168 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 TIFAQ96CG3 184 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 EDC3Q96F86 508 aaKnown RBP7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 PCDHA11Q9Y5I1 949 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 CUL9Q8IWT3 2517 aa7.52□□□□□ -1.21
CDC42SE2-201ENST00000360515 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 LDHBP07195 334 aaKnown RBP7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 CACNB3P54284 484 aa7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 MDM2Q00987 491 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 PPIGQ13427 754 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 EMILIN3Q9NT22 766 aa7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 FANCIQ9NVI1 1328 aa7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 C19orf67A6NJJ6 358 aa7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 PFKMP08237 780 aa7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 ITGB8P26012 769 aa7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 GSTO1P78417 241 aa7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 LRRC41Q15345 812 aa7.51□□□□□ -1.21
CDC42SE2-201ENST00000360515 TMEM240Q5SV17 173 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms