RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 SP3Q02447 781 aa8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 ZNF211Q13398 564 aaPredicted RBP8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 TAF7Q15545 349 aaPredicted RBP8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 INTS6LQ5JSJ4 861 aaKnown RBP8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 CC2D1BQ5T0F9 858 aaKnown RBP8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 NBPF11Q86T75 865 aa8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 NLRP10Q86W26 655 aa8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 ZC3H12CQ9C0D7 883 aaKnown RBP8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 TRMT112Q9UI30 125 aaKnown RBP8.27□□□□□ -1.09
TNFSF11-202ENST00000358545 H3BRB1 525 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 UFL1O94874 794 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 GGCXP38435 758 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 WNT7BP56706 349 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 INHBEP58166 350 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 LDLRAD1Q5T700 205 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 GLYCTKQ8IVS8 523 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 SH3TC2Q8TF17 1288 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 GTF3C2Q8WUA4 911 aaPredicted RBP8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 SHISA4Q96DD7 197 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 WNK4Q96J92 1243 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 GMLQ99445 158 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 MKNK1Q9BUB5 465 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 TUT1Q9H6E5 874 aaKnown RBP8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 ZNF358Q9NW07 568 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 SEPT3Q9UH03 358 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 SSC5DA1L4H1 1573 aa8.26□□□□□ -1.09
TNFSF11-202ENST00000358545 SASH1O94885 1247 aa8.25□□□□□ -1.09
TNFSF11-202ENST00000358545 ANXA1P04083 346 aa8.25□□□□□ -1.09
TNFSF11-202ENST00000358545 ZBTB48P10074 688 aaPredicted RBP8.25□□□□□ -1.09
TNFSF11-202ENST00000358545 HSPA5P11021 654 aaKnown RBP8.25□□□□□ -1.09
TNFSF11-202ENST00000358545 EIF4A1P60842 406 aaKnown RBP8.25□□□□□ -1.09
TNFSF11-202ENST00000358545 FKBP5Q13451 457 aaPredicted RBP8.25□□□□□ -1.09
TNFSF11-202ENST00000358545 CNGB1Q14028 1251 aaPredicted RBP8.25□□□□□ -1.09
TNFSF11-202ENST00000358545 EMID1Q96A84 441 aaPredicted RBP8.25□□□□□ -1.09
TNFSF11-202ENST00000358545 CLMNQ96JQ2 1002 aa8.25□□□□□ -1.09
TNFSF11-202ENST00000358545 ERBB4Q15303 1308 aa8.25□□□□□ -1.09
TNFSF11-202ENST00000358545 WNT10BO00744 389 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 ERVK-9P63128 1117 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 ARID5BQ14865 1188 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 PROSER3Q2NL68 480 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 LRP10Q7Z4F1 713 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 MXD3Q9BW11 206 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 SPTBN5Q9NRC6 3674 aaKnown RBP8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 A0A1W2PPC1 479 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 ANKRD33BA6NCL7 494 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 TMEM229AB2RXF0 380 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 HSP90AB3PQ58FF7 597 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 OTUD7BQ6GQQ9 843 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 CAPN12Q6ZSI9 719 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 Q7L0L9 218 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 EHBP1Q8NDI1 1231 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 PTPN18Q99952 460 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 ANKIB1Q9P2G1 1089 aa8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 DNMT3AQ9Y6K1 912 aaPredicted RBP8.24□□□□□ -1.09
TNFSF11-202ENST00000358545 TTC28Q96AY4 2481 aa8.23□□□□□ -1.09
TNFSF11-202ENST00000358545 EYSQ5T1H1 3165 aa8.23□□□□□ -1.09
TNFSF11-202ENST00000358545 AIMP1Q12904 312 aaKnown RBP8.23□□□□□ -1.09
TNFSF11-202ENST00000358545 MTFR1Q15390 333 aa8.23□□□□□ -1.09
TNFSF11-202ENST00000358545 APOBEC3FQ8IUX4 373 aaKnown RBP8.23□□□□□ -1.09
TNFSF11-202ENST00000358545 DEFB123Q8N688 67 aa8.23□□□□□ -1.09
TNFSF11-202ENST00000358545 PURBQ96QR8 312 aaKnown RBP8.23□□□□□ -1.09
TNFSF11-202ENST00000358545 HTATIP2Q9BUP3 242 aa8.23□□□□□ -1.09
TNFSF11-202ENST00000358545 GGA1Q9UJY5 639 aa8.23□□□□□ -1.09
TNFSF11-202ENST00000358545 MGAMO43451 1857 aa8.23□□□□□ -1.09
TNFSF11-202ENST00000358545 COL1A1P02452 1464 aaPredicted RBP8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 BACH1O14867 736 aa8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 HTATSF1O43719 755 aaKnown RBP8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 ZNF16P17020 682 aaPredicted RBP8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 EIF2S2P20042 333 aaKnown RBP8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 IGFBP4P22692 258 aa8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 RPS8P62241 208 aaKnown RBP8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 ARHGEF6Q15052 776 aa8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 SF3B3Q15393 1217 aaKnown RBP8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 LIAT1Q6ZQX7 453 aa8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 PNISRQ8TF01 805 aaKnown RBP8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 ARHGAP39Q9C0H5 1083 aa8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 OSBPL3Q9H4L5 887 aa8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 TMPRSS4Q9NRS4 437 aa8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 STXBP5LQ9Y2K9 1186 aa8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 NR2E3Q9Y5X4 410 aa8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 MYH3P11055 1940 aa8.22□□□□□ -1.09
TNFSF11-202ENST00000358545 PRUNE2Q8WUY3 3088 aa8.21□□□□□ -1.09
TNFSF11-202ENST00000358545 U2AF1L5P0DN76 240 aaPredicted RBP8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 GDF10P55107 478 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 U2AF1Q01081 240 aaKnown RBP eCLIP8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 MTMR3Q13615 1198 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 TAF1CQ15572 869 aaPredicted RBP8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 MAP3K11Q16584 847 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 ECM1Q16610 540 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 COPS6Q7L5N1 327 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 UBE2Q1Q7Z7E8 422 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 XAGE3Q8WTP9 111 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 COL26A1Q96A83 441 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 FAM89AQ96GI7 184 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 CDK15Q96Q40 435 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 STAP2Q9UGK3 403 aa8.21□□□□□ -1.1
TNFSF11-202ENST00000358545 CD2BP2O95400 341 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms