RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 H0YCG3 227 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 CETN3O15182 167 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 ZEB2O60315 1214 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 NECAB1Q8N987 351 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 MED10Q9BTT4 135 aa6.16□□□□□ -1.42
PTPRD-202ENST00000356435 PDE1AP54750 535 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 DLGAP5Q15398 846 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 ASIC2Q16515 512 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 ZNF365Q70YC5 407 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 INTS8Q75QN2 995 aaKnown RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 NFATC2IPQ8NCF5 419 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 ATRIPQ8WXE1 791 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 ACTN4O43707 911 aaKnown RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 SLC20A2Q08357 652 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 HELBQ8NG08 1087 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 TRPC6Q9Y210 931 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 TYW5A2RUC4 315 aaKnown RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 CASQ2O14958 399 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 WDR46O15213 610 aaKnown RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 ITGA6P23229 1130 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 YARSP54577 528 aaKnown RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 FAM47CQ5HY64 1035 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 TMX3Q96JJ7 454 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 NOC4LQ9BVI4 516 aaKnown RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 GDPD2Q9HCC8 539 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 VWA3AA6NCI4 1184 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 DDX39AO00148 427 aaKnown RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 ZSCAN20P17040 1043 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 SLC12A2P55011 1212 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 ATL3Q6DD88 541 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 DCUN1D2Q6PH85 259 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 ARFGAP2Q8N6H7 521 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 GLG1Q92896 1179 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 ARFGAP3Q9NP61 516 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 ERVK-7P63135 1459 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 PPIP5K2O43314 1243 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 LGSNQ5TDP6 509 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 UBLCP1Q8WVY7 318 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 TEKT1Q969V4 418 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 VCXQ9H320 206 aa6.15□□□□□ -1.42
PTPRD-202ENST00000356435 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.15□□□□□ -1.42
PTPRD-202ENST00000356435 MROH5Q6ZUA9 1318 aa6.15□□□□□ -1.43
PTPRD-202ENST00000356435 HSP90AA4PQ58FG1 418 aa6.15□□□□□ -1.43
PTPRD-202ENST00000356435 OTUD6AQ7L8S5 288 aa6.15□□□□□ -1.43
PTPRD-202ENST00000356435 ZBTB8OSQ8IWT0 167 aa6.15□□□□□ -1.43
PTPRD-202ENST00000356435 IFT81Q8WYA0 676 aa6.15□□□□□ -1.43
PTPRD-202ENST00000356435 RNMTO43148 476 aaKnown RBP6.15□□□□□ -1.43
PTPRD-202ENST00000356435 ZYXQ15942 572 aaKnown RBP6.15□□□□□ -1.43
PTPRD-202ENST00000356435 PPFIBP2Q8ND30 876 aa6.15□□□□□ -1.43
PTPRD-202ENST00000356435 CABLES1Q8TDN4 633 aa6.15□□□□□ -1.43
PTPRD-202ENST00000356435 PLIN2Q99541 437 aa6.15□□□□□ -1.43
PTPRD-202ENST00000356435 STAM2O75886 525 aa6.15□□□□□ -1.43
PTPRD-202ENST00000356435 PDZD4Q76G19 769 aaPredicted RBP6.15□□□□□ -1.43
PTPRD-202ENST00000356435 PLBD2Q8NHP8 589 aa6.15□□□□□ -1.43
PTPRD-202ENST00000356435 ESYT2A0FGR8 921 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 SLFNL1Q499Z3 407 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 DHX32Q7L7V1 743 aaKnown RBP6.14□□□□□ -1.43
PTPRD-202ENST00000356435 USP26Q9BXU7 913 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 ANO3Q9BYT9 981 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 NCKAP5LQ9HCH0 1330 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 APBA3O96018 575 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 TRIM50Q86XT4 487 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 DNAI1Q9UI46 699 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 ATP10BO94823 1461 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 IQSEC2Q5JU85 1478 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 SDSP20132 328 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 APOBRQ0VD83 1088 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 EIF4A2Q14240 407 aaKnown RBP6.14□□□□□ -1.43
PTPRD-202ENST00000356435 NONOQ15233 471 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPRD-202ENST00000356435 DEPTORQ8TB45 409 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 TMEM87BQ96K49 555 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 MIS12Q9H081 205 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 USP21Q9UK80 565 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 UTP11Q9Y3A2 253 aaKnown RBP6.14□□□□□ -1.43
PTPRD-202ENST00000356435 CROCC2H7BZ55 1655 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 SYNRGQ9UMZ2 1314 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 KRT10P13645 584 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 CPLX4Q7Z7G2 160 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 SYCE1Q8N0S2 351 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 VCX3BQ9H321 246 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 PDE8AO60658 829 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 BCRP11274 1271 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 CD19P15391 556 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 LACTBP83111 547 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-202ENST00000356435 ZNF174Q15697 407 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 CEP85LQ5SZL2 805 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 PIK3AP1Q6ZUJ8 805 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 ZNF277Q9NRM2 450 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-202ENST00000356435 CCNA1P78396 465 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 ARHGEF16Q5VV41 709 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 MIER3Q7Z3K6 550 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 CROCCP2Q86T23 111 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 ANKRD44Q8N8A2 993 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 PAGR1Q9BTK6 254 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 MLXIPQ9HAP2 919 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 CTTNBP2NLQ9P2B4 639 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 KDM3AQ9Y4C1 1321 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 S100BP04271 92 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-202ENST00000356435 PDE4DQ08499 809 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 RNF169Q8NCN4 708 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms