RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 ATP10DQ9P241 1426 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 MAP2K2P36507 400 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 ARID5AQ03989 594 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 TTLL7Q6ZT98 887 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 RGS22Q8NE09 1264 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 UBA5Q9GZZ9 404 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 POLR3EQ9NVU0 708 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 MROH5Q6ZUA9 1318 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 EZRP15311 586 aaKnown RBP12.24□□□□□ -0.45
RPL28-201ENST00000344063 IFI16Q16666 785 aaKnown RBP12.24□□□□□ -0.45
RPL28-201ENST00000344063 TMTC1Q8IUR5 882 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 ZNF526Q8TF50 670 aaPredicted RBP12.24□□□□□ -0.45
RPL28-201ENST00000344063 DENND2AQ9ULE3 1009 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 ADGRB1O14514 1584 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 CARMIL3Q8ND23 1372 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 DLC1Q96QB1 1528 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 PTPN12Q05209 780 aaKnown RBP12.24□□□□□ -0.45
RPL28-201ENST00000344063 LRRC24Q50LG9 513 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 SND1Q7KZF4 910 aaKnown RBP eCLIP12.24□□□□□ -0.45
RPL28-201ENST00000344063 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
RPL28-201ENST00000344063 SMIM23A6NLE4 172 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 ADD1P35611 737 aaKnown RBP12.23□□□□□ -0.45
RPL28-201ENST00000344063 NOSTRINQ8IVI9 506 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 MCM9Q9NXL9 1143 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 V9GY48 417 aaPredicted RBP12.23□□□□□ -0.45
RPL28-201ENST00000344063 CRB1P82279 1406 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 ADGRL3Q9HAR2 1447 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 ACTN2P35609 894 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 TTC38Q5R3I4 469 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 TRIML1Q8N9V2 468 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 SPATA5Q8NB90 893 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 PARD6BQ9BYG5 372 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 MMRN2Q9H8L6 949 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 MORC2Q9Y6X9 1032 aaPredicted RBP12.23□□□□□ -0.45
RPL28-201ENST00000344063 PCCAP05165 728 aaPredicted RBP12.23□□□□□ -0.45
RPL28-201ENST00000344063 GNA11P29992 359 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 BRD3Q15059 726 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 CFAP58Q5T655 872 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 CYP26C1Q6V0L0 522 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 USP31Q70CQ4 1352 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 MAST3O60307 1309 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 ZC3H13Q5T200 1668 aaKnown RBP12.23□□□□□ -0.45
RPL28-201ENST00000344063 PRAMEF22A3QJZ6 481 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 GOLGA6BA6NDN3 693 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 KRT9P35527 623 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 SLC39A14Q15043 492 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 CTNND2Q9UQB3 1225 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 CLIC4Q9Y696 253 aa12.23□□□□□ -0.45
RPL28-201ENST00000344063 ZMYND10O75800 440 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 ATP1A3P13637 1013 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 CCT5P48643 541 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 PLCD1P51178 756 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 MSL1Q68DK7 614 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 MKRN1Q9UHC7 482 aaKnown RBP12.22□□□□□ -0.45
RPL28-201ENST00000344063 KCNJ14Q9UNX9 436 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 CAPN7Q9Y6W3 813 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 ANKRD62A6NC57 917 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 CTDSPL2Q05D32 466 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 TCERG1LQ5VWI1 586 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 MYCBPQ99417 103 aaPredicted RBP12.22□□□□□ -0.45
RPL28-201ENST00000344063 FAM204AQ9H8W3 233 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 TAB2Q9NYJ8 693 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 PDE6AP16499 860 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 PAK1Q13153 545 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 CLIC6Q96NY7 704 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 SPAG5Q96R06 1193 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 SETDB2Q96T68 719 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 SERTAD1Q9UHV2 236 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 IKBKBO14920 756 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 VAV2P52735 878 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 UBE3CQ15386 1083 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 CPLX4Q7Z7G2 160 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 ZBTB38Q8NAP3 1195 aaPredicted RBP12.22□□□□□ -0.45
RPL28-201ENST00000344063 LINC00301Q8NCQ3 95 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 ANKRD7Q92527 254 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 CUL5Q93034 780 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 JRKLQ9Y4A0 524 aa12.22□□□□□ -0.45
RPL28-201ENST00000344063 MYO3AQ8NEV4 1616 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 TLDC2A0PJX2 215 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 ERCC3P19447 782 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 ATP1A2P50993 1020 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 SEPT7Q16181 437 aaKnown RBP12.21□□□□□ -0.45
RPL28-201ENST00000344063 DDB1Q16531 1140 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 CCDC51Q96ER9 411 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 NYXQ9GZU5 481 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 KRT79Q5XKE5 535 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 FCHSD1Q86WN1 690 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 BCAS4Q8TDM0 211 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 ANKRD2Q9GZV1 360 aa12.21□□□□□ -0.45
RPL28-201ENST00000344063 C6orf229H3BNL8 230 aa12.21□□□□□ -0.46
RPL28-201ENST00000344063 TRIM66O15016 1216 aa12.21□□□□□ -0.46
RPL28-201ENST00000344063 COBLO75128 1261 aa12.21□□□□□ -0.46
RPL28-201ENST00000344063 PPP6R2O75170 966 aa12.21□□□□□ -0.46
RPL28-201ENST00000344063 CTSWP56202 376 aa12.21□□□□□ -0.46
RPL28-201ENST00000344063 ZNF654Q8IZM8 581 aa12.21□□□□□ -0.46
RPL28-201ENST00000344063 TMOD2Q9NZR1 351 aa12.21□□□□□ -0.46
RPL28-201ENST00000344063 TOB2Q14106 344 aaPredicted RBP12.21□□□□□ -0.46
RPL28-201ENST00000344063 RRP36Q96EU6 259 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms