RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 GRK4P32298 578 aa21.76■■□□□ 1.07
USF2-202ENST00000343550 SLFNL1Q499Z3 407 aa21.76■■□□□ 1.07
USF2-202ENST00000343550 RIOK1Q9BRS2 568 aaKnown RBP21.76■■□□□ 1.07
USF2-202ENST00000343550 AGTPBP1Q9UPW5 1226 aa21.76■■□□□ 1.07
USF2-202ENST00000343550 CAP2P40123 477 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 PDE1AP54750 535 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 PRKCZQ05513 592 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 KBTBD3Q8NAB2 608 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 SMCR8Q8TEV9 937 aaPredicted RBP21.75■■□□□ 1.07
USF2-202ENST00000343550 PI4KBQ9UBF8 816 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 HERC5Q9UII4 1024 aaKnown RBP21.75■■□□□ 1.07
USF2-202ENST00000343550 DOCK1Q14185 1865 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 MAGEB6P1A0A0J9YX57 407 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 CHGBP05060 677 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 SPP2Q13103 211 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 RRP1BQ14684 758 aaKnown RBP21.75■■□□□ 1.07
USF2-202ENST00000343550 UBE3CQ15386 1083 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 MTFR1Q15390 333 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 MAPKAPK5Q8IW41 473 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 ZNF280CQ8ND82 737 aa21.75■■□□□ 1.07
USF2-202ENST00000343550 DHX36Q9H2U1 1008 aaKnown RBP21.75■■□□□ 1.07
USF2-202ENST00000343550 TREML2Q5T2D2 321 aa21.74■■□□□ 1.07
USF2-202ENST00000343550 ZSCAN25Q6NSZ9 544 aa21.74■■□□□ 1.07
USF2-202ENST00000343550 FLT1P17948 1338 aa21.73■■□□□ 1.07
USF2-202ENST00000343550 PROCA1Q8NCQ7 364 aaPredicted RBP21.73■■□□□ 1.07
USF2-202ENST00000343550 TBC1D2Q9BYX2 928 aa21.73■■□□□ 1.07
USF2-202ENST00000343550 GABRQQ9UN88 632 aa21.73■■□□□ 1.07
USF2-202ENST00000343550 PHIPQ8WWQ0 1821 aa21.73■■□□□ 1.07
USF2-202ENST00000343550 USP17L5A8MUK1 530 aa21.72■■□□□ 1.07
USF2-202ENST00000343550 BIN2Q9UBW5 565 aaPredicted RBP21.72■■□□□ 1.07
USF2-202ENST00000343550 PNMA3Q9UL41 463 aa21.72■■□□□ 1.07
USF2-202ENST00000343550 CDK5RAP2Q96SN8 1893 aa21.72■■□□□ 1.07
USF2-202ENST00000343550 USP5P45974 858 aa21.71■■□□□ 1.07
USF2-202ENST00000343550 ANKRD13CQ8N6S4 541 aa21.71■■□□□ 1.07
USF2-202ENST00000343550 PALD1Q9ULE6 856 aa21.71■■□□□ 1.07
USF2-202ENST00000343550 PTPRFP10586 1907 aa21.71■■□□□ 1.07
USF2-202ENST00000343550 CCL5P13501 91 aa21.7■■□□□ 1.07
USF2-202ENST00000343550 HMGCS2P54868 508 aa21.7■■□□□ 1.07
USF2-202ENST00000343550 FOXP4Q8IVH2 680 aaPredicted RBP21.7■■□□□ 1.07
USF2-202ENST00000343550 PLEKHM2Q8IWE5 1019 aa21.7■■□□□ 1.07
USF2-202ENST00000343550 SLAIN1Q8ND83 568 aa21.7■■□□□ 1.07
USF2-202ENST00000343550 TNPO2O14787 897 aaKnown RBP21.7■■□□□ 1.06
USF2-202ENST00000343550 RNF113AO15541 343 aaKnown RBP21.7■■□□□ 1.06
USF2-202ENST00000343550 FLT3LGP49771 235 aa21.7■■□□□ 1.06
USF2-202ENST00000343550 UBXN2AP68543 259 aa21.7■■□□□ 1.06
USF2-202ENST00000343550 LCORLQ8N3X6 602 aa21.7■■□□□ 1.06
USF2-202ENST00000343550 NKX2-3Q8TAU0 364 aa21.7■■□□□ 1.06
USF2-202ENST00000343550 CRNKL1Q9BZJ0 848 aaKnown RBP21.7■■□□□ 1.06
USF2-202ENST00000343550 PUS7LQ9H0K6 701 aaKnown RBP21.7■■□□□ 1.06
USF2-202ENST00000343550 RNF208Q9H0X6 261 aa21.7■■□□□ 1.06
USF2-202ENST00000343550 ARMT1Q9H993 441 aa21.7■■□□□ 1.06
USF2-202ENST00000343550 AS3MTQ9HBK9 375 aa21.7■■□□□ 1.06
USF2-202ENST00000343550 FOCADQ5VW36 1801 aa21.69■■□□□ 1.06
USF2-202ENST00000343550 GJB1P08034 283 aa21.69■■□□□ 1.06
USF2-202ENST00000343550 METTL16Q86W50 562 aaKnown RBP21.69■■□□□ 1.06
USF2-202ENST00000343550 SHISA4Q96DD7 197 aa21.69■■□□□ 1.06
USF2-202ENST00000343550 SAP30BPQ9UHR5 308 aaKnown RBP21.69■■□□□ 1.06
USF2-202ENST00000343550 MYH7P12883 1935 aa21.68■■□□□ 1.06
USF2-202ENST00000343550 ADCY3O60266 1144 aa21.68■■□□□ 1.06
USF2-202ENST00000343550 ZFYP08048 801 aaPredicted RBP21.68■■□□□ 1.06
USF2-202ENST00000343550 ASNSP08243 561 aa21.68■■□□□ 1.06
USF2-202ENST00000343550 GJA8P48165 433 aa21.68■■□□□ 1.06
USF2-202ENST00000343550 PABPC4Q13310 644 aaKnown RBP eCLIP21.68■■□□□ 1.061e-7■■■■□ 21.3
USF2-202ENST00000343550 FAM110CQ1W6H9 321 aa21.68■■□□□ 1.06
USF2-202ENST00000343550 SH3D19Q5HYK7 790 aa21.68■■□□□ 1.06
USF2-202ENST00000343550 CRACR2BQ8N4Y2 399 aaPredicted RBP21.68■■□□□ 1.06
USF2-202ENST00000343550 WDR18Q9BV38 432 aa21.68■■□□□ 1.06
USF2-202ENST00000343550 TRIM34Q9BYJ4 488 aa21.68■■□□□ 1.06
USF2-202ENST00000343550 OSBPL3Q9H4L5 887 aa21.68■■□□□ 1.06
USF2-202ENST00000343550 DNAJC18Q9H819 358 aa21.68■■□□□ 1.06
USF2-202ENST00000343550 MBD4O95243 580 aa21.67■■□□□ 1.06
USF2-202ENST00000343550 GCLCP48506 637 aaPredicted RBP21.67■■□□□ 1.06
USF2-202ENST00000343550 HABP4Q5JVS0 413 aaKnown RBP21.67■■□□□ 1.06
USF2-202ENST00000343550 PXYLP1Q8TE99 480 aa21.67■■□□□ 1.06
USF2-202ENST00000343550 PRKAB2O43741 272 aa21.66■■□□□ 1.06
USF2-202ENST00000343550 JAG1P78504 1218 aa21.66■■□□□ 1.06
USF2-202ENST00000343550 IRF5Q13568 498 aa21.66■■□□□ 1.06
USF2-202ENST00000343550 LRRFIP1Q32MZ4 808 aaKnown RBP21.66■■□□□ 1.06
USF2-202ENST00000343550 SDR42E1Q8WUS8 393 aa21.66■■□□□ 1.06
USF2-202ENST00000343550 OSBP2Q969R2 916 aa21.66■■□□□ 1.06
USF2-202ENST00000343550 COA7Q96BR5 231 aa21.66■■□□□ 1.06
USF2-202ENST00000343550 EVI5LQ96CN4 794 aa21.66■■□□□ 1.06
USF2-202ENST00000343550 ASCC2Q9H1I8 757 aaPredicted RBP21.66■■□□□ 1.06
USF2-202ENST00000343550 PCDH10Q9P2E7 1040 aa21.66■■□□□ 1.06
USF2-202ENST00000343550 MGAMO43451 1857 aa21.66■■□□□ 1.06
USF2-202ENST00000343550 ELNP15502 786 aa21.65■■□□□ 1.06
USF2-202ENST00000343550 BACE1P56817 501 aa21.65■■□□□ 1.06
USF2-202ENST00000343550 MTMR2Q13614 643 aa21.65■■□□□ 1.06
USF2-202ENST00000343550 APPBP2Q92624 585 aa21.65■■□□□ 1.06
USF2-202ENST00000343550 FSD1Q9BTV5 496 aa21.65■■□□□ 1.06
USF2-202ENST00000343550 UNC93B1Q9H1C4 597 aa21.65■■□□□ 1.06
USF2-202ENST00000343550 DCP1AQ9NPI6 582 aaPredicted RBP21.65■■□□□ 1.06
USF2-202ENST00000343550 HLA-DOAP06340 250 aa21.65■■□□□ 1.06
USF2-202ENST00000343550 STRBPQ96SI9 672 aaKnown RBP21.65■■□□□ 1.06
USF2-202ENST00000343550 ATP8A2Q9NTI2 1148 aa21.65■■□□□ 1.06
USF2-202ENST00000343550 GINM1Q9NU53 330 aa21.65■■□□□ 1.06
USF2-202ENST00000343550 PDE4AP27815 886 aa21.64■■□□□ 1.05
USF2-202ENST00000343550 SHROOM1Q2M3G4 852 aaPredicted RBP21.64■■□□□ 1.05
USF2-202ENST00000343550 TTC6Q86TZ1 520 aa21.64■■□□□ 1.05
USF2-202ENST00000343550 TMOD4Q9NZQ9 345 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms