RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 KCNQ5Q9NR82 932 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 AP5Z1O43299 807 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 AFMP43652 599 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 BAZ2AQ9UIF9 1905 aaKnown RBP11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 PNOCQ13519 176 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 BRAPQ7Z569 592 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 TBC1D16Q8TBP0 767 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 BTAF1O14981 1849 aa11.72□□□□□ -0.53
RBFOX1-202ENST00000340209 ZNF202O95125 648 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 PDIA4P13667 645 aaKnown RBP11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 LIFRP42702 1097 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 KLHL10Q6JEL2 608 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 PIK3AP1Q6ZUJ8 805 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 CRACR2BQ8N4Y2 399 aaPredicted RBP11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 WASF1Q92558 559 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 PPP1R9BQ96SB3 815 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 LEMD3Q9Y2U8 911 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 MROH7-TTC4A0A0A0MT08 1334 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 DEXIO95424 95 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 PTGS1P23219 599 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 MCM7P33993 719 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 NOSTRINQ8IVI9 506 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 LRRC47Q8N1G4 583 aaKnown RBP11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 STAG2Q8N3U4 1231 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 CNNM3Q8NE01 707 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 NRBP1Q9UHY1 535 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 LAMA4Q16363 1823 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 RTL9Q8NET4 1388 aa11.71□□□□□ -0.53
RBFOX1-202ENST00000340209 FRMPD2Q68DX3 1309 aaPredicted RBP11.71□□□□□ -0.54
RBFOX1-202ENST00000340209 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.54
RBFOX1-202ENST00000340209 NTRK3Q16288 839 aa11.71□□□□□ -0.54
RBFOX1-202ENST00000340209 SCAF8Q9UPN6 1271 aaKnown RBP11.71□□□□□ -0.54
RBFOX1-202ENST00000340209 COBLO75128 1261 aa11.71□□□□□ -0.54
RBFOX1-202ENST00000340209 CDC25AP30304 524 aa11.71□□□□□ -0.54
RBFOX1-202ENST00000340209 PNMA1Q8ND90 353 aa11.71□□□□□ -0.54
RBFOX1-202ENST00000340209 UBA5Q9GZZ9 404 aa11.71□□□□□ -0.54
RBFOX1-202ENST00000340209 BRMS1Q9HCU9 246 aa11.71□□□□□ -0.54
RBFOX1-202ENST00000340209 POLRMTO00411 1230 aaKnown RBP11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 FOXN1O15353 648 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 LDHCP07864 332 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 IFNAR1P17181 557 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 CASP1P29466 404 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 LMOD1P29536 600 aaPredicted RBP11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 DHX8Q14562 1220 aaKnown RBP11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 SGMS1Q86VZ5 419 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 C2CD5Q86YS7 1000 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 CEP57L1Q8IYX8 460 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 TMTC2Q8N394 836 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 JMYQ8N9B5 988 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 RTEL1Q9NZ71 1219 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 PCDHAC2Q9Y5I4 1007 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 STX1AQ16623 288 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 DPCR1Q3MIW9 517 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 DHX58Q96C10 678 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 PDGFDQ9GZP0 370 aaPredicted RBP11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 RXRBP28702 533 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 GSTO1P78417 241 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 CCDC186Q7Z3E2 898 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 ARPP21Q9UBL0 812 aaPredicted RBP11.7□□□□□ -0.54
RBFOX1-202ENST00000340209 NWD2Q9ULI1 1742 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 VWA3AA6NCI4 1184 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 POLR2DO15514 142 aaKnown RBP11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 ATP2B4P23634 1241 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 LRMPQ12912 555 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 IKQ13123 557 aaPredicted RBP11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 TRIM34Q9BYJ4 488 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 GPCPD1Q9NPB8 672 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 ADALQ6DHV7 355 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 USP17L2Q6R6M4 530 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 USP49Q70CQ1 688 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 EYA3Q99504 573 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 ATP8A2Q9NTI2 1148 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 MMP1P03956 469 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 RBM6P78332 1123 aaKnown RBP11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 EARS2Q5JPH6 523 aaKnown RBP11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 CLIP2Q9UDT6 1046 aa11.69□□□□□ -0.54
RBFOX1-202ENST00000340209 SEMA3EO15041 775 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 KRT2P35908 639 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 DEFB132Q7Z7B7 95 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 SRBD1Q8N5C6 995 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 TDRD7Q8NHU6 1098 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 ZNF592Q92610 1267 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 ATRNO75882 1429 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 MYH2Q9UKX2 1941 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 EZH2Q15910 746 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 CCDC96Q2M329 555 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 ANO10Q9NW15 660 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 MYH7P12883 1935 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 MYH13Q9UKX3 1938 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 ADRA2BP18089 450 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 EVCP57679 992 aa11.68□□□□□ -0.54
RBFOX1-202ENST00000340209 SNW1Q13573 536 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms