RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 ARHGAP6O43182 974 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 GUCY1A2P33402 732 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 CTDSPL2Q05D32 466 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 WTAPQ15007 396 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 RAB11FIP4Q86YS3 637 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 DIS3L2Q8IYB7 885 aaKnown RBP15.35■□□□□ 0.05
RC3H2-201ENST00000335387 TRIM22Q8IYM9 498 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 CNNM3Q8NE01 707 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 CDC5LQ99459 802 aaKnown RBP15.35■□□□□ 0.05
RC3H2-201ENST00000335387 PHF20Q9BVI0 1012 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 BRIP1Q9BX63 1249 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 SLC26A6Q9BXS9 759 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 ARMT1Q9H993 441 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 USP21Q9UK80 565 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 DDX60LQ5H9U9 1706 aaKnown RBP15.35■□□□□ 0.05
RC3H2-201ENST00000335387 PDE4BQ07343 736 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 CCDC152Q4G0S7 254 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 APTXQ7Z2E3 356 aaKnown RBP15.35■□□□□ 0.05
RC3H2-201ENST00000335387 FANCBQ8NB91 859 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 SHISA4Q96DD7 197 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 RIOK1Q9BRS2 568 aaKnown RBP15.35■□□□□ 0.05
RC3H2-201ENST00000335387 BTG4Q9NY30 223 aa15.35■□□□□ 0.05
RC3H2-201ENST00000335387 PRPF3O43395 683 aaKnown RBP15.34■□□□□ 0.05
RC3H2-201ENST00000335387 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
RC3H2-201ENST00000335387 STX10O60499 249 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 KIF20AO95235 890 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 BMP15O95972 392 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 SAFBQ15424 915 aaKnown RBP eCLIP15.34■□□□□ 0.05
RC3H2-201ENST00000335387 NFXL1Q6ZNB6 911 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 CREBRFQ8IUR6 639 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 CCDC87Q9NVE4 849 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 BTBD18B2RXH4 712 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 BIN1O00499 593 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 APPP05067 770 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 LMOD1P29536 600 aaPredicted RBP15.34■□□□□ 0.05
RC3H2-201ENST00000335387 PPARAQ07869 468 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 PKN1Q16512 942 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 ZNF654Q8IZM8 581 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 MED15Q96RN5 788 aa15.34■□□□□ 0.05
RC3H2-201ENST00000335387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.34■□□□□ 0.05
RC3H2-201ENST00000335387 NUTM2BA6NNL0 878 aaPredicted RBP15.33■□□□□ 0.05
RC3H2-201ENST00000335387 NUTM2EB1AL46 878 aaPredicted RBP15.33■□□□□ 0.05
RC3H2-201ENST00000335387 PBX1P40424 430 aa15.33■□□□□ 0.05
RC3H2-201ENST00000335387 VPS72Q15906 364 aa15.33■□□□□ 0.05
RC3H2-201ENST00000335387 NUTM2AQ8IVF1 878 aaPredicted RBP15.33■□□□□ 0.05
RC3H2-201ENST00000335387 FANCLQ9NW38 375 aa15.33■□□□□ 0.05
RC3H2-201ENST00000335387 A0A1B0GTH6 734 aa15.33■□□□□ 0.04
RC3H2-201ENST00000335387 RXRAP19793 462 aa15.33■□□□□ 0.04
RC3H2-201ENST00000335387 PLCD1P51178 756 aa15.33■□□□□ 0.04
RC3H2-201ENST00000335387 NR1I3Q14994 352 aa15.33■□□□□ 0.04
RC3H2-201ENST00000335387 RBM28Q9NW13 759 aaKnown RBP15.33■□□□□ 0.04
RC3H2-201ENST00000335387 FANCGO15287 622 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 C8orf37Q96NL8 207 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 SLC4A4Q9Y6R1 1079 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 ZSCAN12O43309 604 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 CBX1P83916 185 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 NAA30Q147X3 362 aaPredicted RBP15.32■□□□□ 0.04
RC3H2-201ENST00000335387 SF3B3Q15393 1217 aaKnown RBP15.32■□□□□ 0.04
RC3H2-201ENST00000335387 INCENPQ9NQS7 918 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 TRMT1Q9NXH9 659 aaKnown RBP15.32■□□□□ 0.04
RC3H2-201ENST00000335387 DNAI1Q9UI46 699 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 TNRC6CQ9HCJ0 1690 aaKnown RBP15.32■□□□□ 0.04
RC3H2-201ENST00000335387 UBE2Q2LH0YL09 131 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 DDAH1O94760 285 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 FBXO38Q6PIJ6 1188 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 TC2NQ8N9U0 490 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 FERMT2Q96AC1 680 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 PKNOX2Q96KN3 472 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 MPHOSPH8Q99549 860 aa15.32■□□□□ 0.04
RC3H2-201ENST00000335387 VWA3AA6NCI4 1184 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 PRKAB2O43741 272 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 CALM1P0DP23 149 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 CALM2P0DP24 149 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 CALM3P0DP25 149 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 CUL4BQ13620 913 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 NPY5RQ15761 445 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 CDKAL1Q5VV42 579 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 CLEC4GQ6UXB4 293 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 UPF1Q92900 1129 aaKnown RBP eCLIP15.31■□□□□ 0.04
RC3H2-201ENST00000335387 PANX2Q96RD6 677 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 MYL10Q9BUA6 226 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.31■□□□□ 0.04
RC3H2-201ENST00000335387 EXOC5O00471 708 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 ORC4O43929 436 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 GNL2Q13823 731 aaKnown RBP15.31■□□□□ 0.04
RC3H2-201ENST00000335387 UBE4AQ14139 1066 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 SPECC1LQ69YQ0 1117 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 ZNF446Q9NWS9 450 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 PCDHB6Q9Y5E3 794 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 PARP3Q9Y6F1 533 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 MYH1P12882 1939 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 CDK5RAP2Q96SN8 1893 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 ITIH6Q6UXX5 1313 aa15.31■□□□□ 0.04
RC3H2-201ENST00000335387 ATP8B1O43520 1251 aa15.3■□□□□ 0.04
RC3H2-201ENST00000335387 TOP1P11387 765 aaKnown RBP15.3■□□□□ 0.04
RC3H2-201ENST00000335387 FMR1Q06787 632 aaKnown RBP eCLIP15.3■□□□□ 0.04
RC3H2-201ENST00000335387 ADGRA1Q86SQ6 560 aa15.3■□□□□ 0.04
RC3H2-201ENST00000335387 ESR2Q92731 530 aa15.3■□□□□ 0.04
RC3H2-201ENST00000335387 GRIN1Q05586 938 aa15.3■□□□□ 0.04
RC3H2-201ENST00000335387 CHRNDQ07001 517 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms