RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NOM1Q5C9Z4 860 aaKnown RBP13.52□□□□□ -0.24
HDAC6-201ENST00000334136 FAM173BQ6P4H8 233 aa13.52□□□□□ -0.24
HDAC6-201ENST00000334136 ZNF589Q86UQ0 364 aaPredicted RBP13.52□□□□□ -0.24
HDAC6-201ENST00000334136 LUZP1Q86V48 1076 aa13.52□□□□□ -0.24
HDAC6-201ENST00000334136 DDX19AQ9NUU7 478 aaKnown RBP13.52□□□□□ -0.24
HDAC6-201ENST00000334136 F13A1P00488 732 aa13.52□□□□□ -0.25
HDAC6-201ENST00000334136 TFAP4Q01664 338 aa13.52□□□□□ -0.25
HDAC6-201ENST00000334136 ANO10Q9NW15 660 aa13.52□□□□□ -0.25
HDAC6-201ENST00000334136 ABCA3Q99758 1704 aa13.52□□□□□ -0.25
HDAC6-201ENST00000334136 PPP1R12BO60237 982 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-201ENST00000334136 SYT1P21579 422 aa13.52□□□□□ -0.25
HDAC6-201ENST00000334136 CRY2Q49AN0 593 aa13.52□□□□□ -0.25
HDAC6-201ENST00000334136 CSRNP1Q96S65 589 aa13.52□□□□□ -0.25
HDAC6-201ENST00000334136 SUGT1Q9Y2Z0 365 aa13.52□□□□□ -0.25
HDAC6-201ENST00000334136 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.25
HDAC6-201ENST00000334136 CCP110O43303 1012 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 GNAQP50148 359 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 AK2P54819 239 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 SSRP1Q08945 709 aaKnown RBP13.51□□□□□ -0.25
HDAC6-201ENST00000334136 RTN1Q16799 776 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 TMED8Q6PL24 325 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-201ENST00000334136 CACNB3P54284 484 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 SETQ01105 290 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-201ENST00000334136 RUFY3Q7L099 469 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 ACBD3Q9H3P7 528 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 SH2D4AQ9H788 454 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 PALD1Q9ULE6 856 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 SKILP12757 684 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 FGFR2P21802 821 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-201ENST00000334136 TICAM2Q86XR7 235 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 FSIP1Q8NA03 581 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 ZNF512BQ96KM6 892 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-201ENST00000334136 PPP1R9BQ96SB3 815 aa13.51□□□□□ -0.25
HDAC6-201ENST00000334136 EPB41L2O43491 1005 aaKnown RBP13.5□□□□□ -0.25
HDAC6-201ENST00000334136 U2AF2P26368 475 aaKnown RBP eCLIP13.5□□□□□ -0.251e-7■■□□□ 14.2
HDAC6-201ENST00000334136 HSPA4P34932 840 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 CAGE1Q8TC20 777 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 STRBPQ96SI9 672 aaKnown RBP13.5□□□□□ -0.25
HDAC6-201ENST00000334136 ARHGEF10LQ9HCE6 1279 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 CNOT7Q9UIV1 285 aaKnown RBP13.5□□□□□ -0.25
HDAC6-201ENST00000334136 E7EWF7 191 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 PSMD14O00487 310 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 NAP1L1P55209 391 aaKnown RBP13.5□□□□□ -0.25
HDAC6-201ENST00000334136 FAM47AQ5JRC9 791 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-201ENST00000334136 TMEM87BQ96K49 555 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 MXD3Q9BW11 206 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 ORC3Q9UBD5 711 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-201ENST00000334136 RASSF7Q02833 373 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 APOBRQ0VD83 1088 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 SUPT20HL1Q3ZLR7 823 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 TMC6Q7Z403 805 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
HDAC6-201ENST00000334136 CSADQ9Y600 493 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 ZNF609O15014 1411 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 C9orf131Q5VYM1 1079 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 RSBN1LQ6PCB5 846 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-201ENST00000334136 RUFY1Q96T51 708 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 SLC26A6Q9BXS9 759 aa13.5□□□□□ -0.25
HDAC6-201ENST00000334136 MROH7-TTC4A0A0A0MT08 1334 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 MED23Q9ULK4 1368 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 CALM1P0DP23 149 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 CALM2P0DP24 149 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 CALM3P0DP25 149 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 TYRO3Q06418 890 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 JMYQ8N9B5 988 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 SH3RF3Q8TEJ3 882 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-201ENST00000334136 C8orf76Q96K31 380 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 ZSWIM4Q9H7M6 989 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 ZYXQ15942 572 aaKnown RBP13.49□□□□□ -0.25
HDAC6-201ENST00000334136 CERKLQ49MI3 558 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-201ENST00000334136 SYT17Q9BSW7 474 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 DHX36Q9H2U1 1008 aaKnown RBP13.49□□□□□ -0.25
HDAC6-201ENST00000334136 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 IQCA1LA6NCM1 817 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 H0YHG0 523 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 RIOK3O14730 519 aaKnown RBP13.49□□□□□ -0.25
HDAC6-201ENST00000334136 MICALL2Q8IY33 904 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 CCDC102AQ96A19 550 aa13.49□□□□□ -0.25
HDAC6-201ENST00000334136 NSUN4Q96CB9 384 aaKnown RBP13.49□□□□□ -0.25
HDAC6-201ENST00000334136 RPS6KB1P23443 525 aa13.48□□□□□ -0.25
HDAC6-201ENST00000334136 GPT2Q8TD30 523 aa13.48□□□□□ -0.25
HDAC6-201ENST00000334136 ANGEL1Q9UNK9 670 aaKnown RBP13.48□□□□□ -0.25
HDAC6-201ENST00000334136 SNW1Q13573 536 aaKnown RBP13.48□□□□□ -0.25
HDAC6-201ENST00000334136 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
HDAC6-201ENST00000334136 LSG1Q9H089 658 aaKnown RBP13.48□□□□□ -0.25
HDAC6-201ENST00000334136 RXRAP19793 462 aa13.48□□□□□ -0.25
HDAC6-201ENST00000334136 GMPSP49915 693 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-201ENST00000334136 HSP90AA4PQ58FG1 418 aa13.48□□□□□ -0.25
HDAC6-201ENST00000334136 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-201ENST00000334136 PI4KBQ9UBF8 816 aa13.48□□□□□ -0.25
HDAC6-201ENST00000334136 TAF3Q5VWG9 929 aa13.47□□□□□ -0.25
HDAC6-201ENST00000334136 KRT222Q8N1A0 295 aa13.47□□□□□ -0.25
HDAC6-201ENST00000334136 NLRP5P59047 1200 aa13.47□□□□□ -0.25
HDAC6-201ENST00000334136 SMAP1Q8IYB5 467 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-201ENST00000334136 MYRIPQ8NFW9 859 aa13.47□□□□□ -0.25
HDAC6-201ENST00000334136 INTS4Q96HW7 963 aaKnown RBP13.47□□□□□ -0.25
HDAC6-201ENST00000334136 KIF2AO00139 706 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms