RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 AATFQ9NY61 560 aaKnown RBP eCLIP24.66■■□□□ 1.54
LIMS2-201ENST00000324938 CALM1P0DP23 149 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 CALM2P0DP24 149 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 CALM3P0DP25 149 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 CHAF1AQ13111 956 aaPredicted RBP24.65■■□□□ 1.54
LIMS2-201ENST00000324938 SPATA31A6Q5VVP1 1343 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 DYNC1I1O14576 645 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 PRDM1O75626 825 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 DDAH1O94760 285 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 AKAP17AQ02040 695 aaKnown RBP24.65■■□□□ 1.54
LIMS2-201ENST00000324938 NR5A1Q13285 461 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 FAM182BQ5T319 152 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 MYRIPQ8NFW9 859 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 KCNH3Q9ULD8 1083 aa24.65■■□□□ 1.54
LIMS2-201ENST00000324938 PRPF3O43395 683 aaKnown RBP24.64■■□□□ 1.54
LIMS2-201ENST00000324938 NEMFO60524 1076 aa24.64■■□□□ 1.54
LIMS2-201ENST00000324938 TROAPQ12815 778 aa24.64■■□□□ 1.54
LIMS2-201ENST00000324938 TXNRD3Q86VQ6 643 aa24.64■■□□□ 1.54
LIMS2-201ENST00000324938 ELOA2Q8IYF1 753 aaPredicted RBP24.64■■□□□ 1.54
LIMS2-201ENST00000324938 ARPP21Q9UBL0 812 aaPredicted RBP24.64■■□□□ 1.54
LIMS2-201ENST00000324938 FBXO2Q9UK22 296 aaPredicted RBP24.64■■□□□ 1.54
LIMS2-201ENST00000324938 XBP1P17861 261 aa24.64■■□□□ 1.53
LIMS2-201ENST00000324938 PTPREP23469 700 aa24.64■■□□□ 1.53
LIMS2-201ENST00000324938 PKN1Q16512 942 aa24.64■■□□□ 1.53
LIMS2-201ENST00000324938 SBK1Q52WX2 424 aa24.64■■□□□ 1.53
LIMS2-201ENST00000324938 KRBA2Q6ZNG9 492 aa24.64■■□□□ 1.53
LIMS2-201ENST00000324938 RFC4P35249 363 aa24.63■■□□□ 1.53
LIMS2-201ENST00000324938 SPTY2D1Q68D10 685 aaPredicted RBP24.63■■□□□ 1.53
LIMS2-201ENST00000324938 LRRC8AQ8IWT6 810 aa24.63■■□□□ 1.53
LIMS2-201ENST00000324938 OXER1Q8TDS5 423 aa24.63■■□□□ 1.53
LIMS2-201ENST00000324938 SHISA4Q96DD7 197 aa24.63■■□□□ 1.53
LIMS2-201ENST00000324938 SMTNL1A8MU46 457 aa24.62■■□□□ 1.53
LIMS2-201ENST00000324938 IKBKBO14920 756 aa24.62■■□□□ 1.53
LIMS2-201ENST00000324938 IGSF3O75054 1194 aa24.62■■□□□ 1.53
LIMS2-201ENST00000324938 TPM4P67936 248 aa24.62■■□□□ 1.53
LIMS2-201ENST00000324938 NCAPHQ15003 741 aa24.62■■□□□ 1.53
LIMS2-201ENST00000324938 METTL16Q86W50 562 aaKnown RBP24.62■■□□□ 1.53
LIMS2-201ENST00000324938 UBR3Q6ZT12 1888 aa24.62■■□□□ 1.53
LIMS2-201ENST00000324938 NAV1Q8NEY1 1877 aa24.62■■□□□ 1.53
LIMS2-201ENST00000324938 CEP131Q9UPN4 1083 aa24.62■■□□□ 1.53
LIMS2-201ENST00000324938 PCDHB6Q9Y5E3 794 aa24.62■■□□□ 1.53
LIMS2-201ENST00000324938 MORC2Q9Y6X9 1032 aaPredicted RBP24.62■■□□□ 1.53
LIMS2-201ENST00000324938 NPHP1O15259 732 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 PLEKHA8P1O95397 391 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 PNOCQ13519 176 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 GRAPQ13588 217 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 LONRF3Q496Y0 759 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 TRAPPC3LQ5T215 181 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 ZNF579Q8NAF0 562 aaKnown RBP24.61■■□□□ 1.53
LIMS2-201ENST00000324938 GRAPLQ8TC17 118 aaPredicted RBP24.61■■□□□ 1.53
LIMS2-201ENST00000324938 PHF20Q9BVI0 1012 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 EVX2Q03828 476 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 TMTC3Q6ZXV5 915 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 CNNM3Q8NE01 707 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 FAM13BQ9NYF5 915 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 LEMD3Q9Y2U8 911 aa24.61■■□□□ 1.53
LIMS2-201ENST00000324938 RRP9O43818 475 aaKnown RBP24.6■■□□□ 1.53
LIMS2-201ENST00000324938 DZIP1Q86YF9 867 aaKnown RBP24.6■■□□□ 1.53
LIMS2-201ENST00000324938 VPS54Q9P1Q0 977 aa24.6■■□□□ 1.53
LIMS2-201ENST00000324938 KRT2P35908 639 aa24.59■■□□□ 1.53
LIMS2-201ENST00000324938 NFIXQ14938 502 aa24.59■■□□□ 1.53
LIMS2-201ENST00000324938 SRPRBQ9Y5M8 271 aaKnown RBP24.59■■□□□ 1.53
LIMS2-201ENST00000324938 CDK5RAP2Q96SN8 1893 aa24.59■■□□□ 1.53
LIMS2-201ENST00000324938 CNTNAP5Q8WYK1 1306 aa24.59■■□□□ 1.53
LIMS2-201ENST00000324938 GRIN1Q05586 938 aa24.59■■□□□ 1.53
LIMS2-201ENST00000324938 CABP5Q9NP86 173 aa24.59■■□□□ 1.53
LIMS2-201ENST00000324938 CYP2D6P10635 497 aa24.58■■□□□ 1.53
LIMS2-201ENST00000324938 GTF2F1P35269 517 aaKnown RBP eCLIP24.58■■□□□ 1.53
LIMS2-201ENST00000324938 PDE4BQ07343 736 aa24.58■■□□□ 1.53
LIMS2-201ENST00000324938 CNBD1Q8NA66 436 aa24.58■■□□□ 1.53
LIMS2-201ENST00000324938 WDR66Q8TBY9 1149 aa24.58■■□□□ 1.53
LIMS2-201ENST00000324938 OSBPL5Q9H0X9 879 aaPredicted RBP24.58■■□□□ 1.53
LIMS2-201ENST00000324938 IMPACTQ9P2X3 320 aa24.58■■□□□ 1.53
LIMS2-201ENST00000324938 V9GY48 417 aaPredicted RBP24.58■■□□□ 1.53
LIMS2-201ENST00000324938 GSDMDP57764 484 aa24.58■■□□□ 1.52
LIMS2-201ENST00000324938 FAM196AQ6ZSG2 479 aa24.58■■□□□ 1.52
LIMS2-201ENST00000324938 ANKIB1Q9P2G1 1089 aa24.58■■□□□ 1.52
LIMS2-201ENST00000324938 HOOK1Q9UJC3 728 aaKnown RBP24.58■■□□□ 1.52
LIMS2-201ENST00000324938 JAG2Q9Y219 1238 aa24.58■■□□□ 1.52
LIMS2-201ENST00000324938 XDHP47989 1333 aa24.57■■□□□ 1.52
LIMS2-201ENST00000324938 MDM2Q00987 491 aaPredicted RBP24.57■■□□□ 1.52
LIMS2-201ENST00000324938 ARID5BQ14865 1188 aa24.57■■□□□ 1.52
LIMS2-201ENST00000324938 SPECC1Q5M775 1068 aa24.57■■□□□ 1.52
LIMS2-201ENST00000324938 ISM2Q6H9L7 571 aa24.57■■□□□ 1.52
LIMS2-201ENST00000324938 FILIP1Q7Z7B0 1213 aa24.57■■□□□ 1.52
LIMS2-201ENST00000324938 GJD4Q96KN9 370 aaPredicted RBP24.57■■□□□ 1.52
LIMS2-201ENST00000324938 XPO4Q9C0E2 1151 aaKnown RBP24.57■■□□□ 1.52
LIMS2-201ENST00000324938 NT5C2P49902 561 aa24.56■■□□□ 1.52
LIMS2-201ENST00000324938 CTCFLQ8NI51 663 aaPredicted RBP24.56■■□□□ 1.52
LIMS2-201ENST00000324938 NOL10Q9BSC4 688 aaKnown RBP24.56■■□□□ 1.52
LIMS2-201ENST00000324938 IFNKQ9P0W0 207 aa24.56■■□□□ 1.52
LIMS2-201ENST00000324938 NMT2O60551 498 aa24.56■■□□□ 1.52
LIMS2-201ENST00000324938 ADRA2BP18089 450 aa24.56■■□□□ 1.52
LIMS2-201ENST00000324938 FAM47AQ5JRC9 791 aa24.56■■□□□ 1.52
LIMS2-201ENST00000324938 FOXP4Q8IVH2 680 aaPredicted RBP24.56■■□□□ 1.52
LIMS2-201ENST00000324938 HSD3B7Q9H2F3 369 aa24.56■■□□□ 1.52
LIMS2-201ENST00000324938 MKRN1Q9UHC7 482 aaKnown RBP24.56■■□□□ 1.52
LIMS2-201ENST00000324938 PCDHA5Q9Y5H7 936 aa24.56■■□□□ 1.52
LIMS2-201ENST00000324938 TRIM75PA6NK02 468 aa24.55■■□□□ 1.52
LIMS2-201ENST00000324938 SMC2O95347 1197 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms