RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 PTPRUQ92729 1446 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 IGKV5-2P06315 115 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 CCDC186Q7Z3E2 898 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 GJD4Q96KN9 370 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-201ENST00000324501 IFNKQ9P0W0 207 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 COL15A1P39059 1388 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 SMCO2A6NFE2 343 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 SETQ01105 290 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-201ENST00000324501 MIGA2Q7L4E1 593 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 ELP1O95163 1332 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 PREX1Q8TCU6 1659 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 CRB1P82279 1406 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 ERVV-1B6SEH8 477 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 CYP19A1P11511 503 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-201ENST00000324501 GSDMDP57764 484 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 PDE4DQ08499 809 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 PKP1Q13835 747 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 KCTD1Q719H9 257 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 VSIG10Q8N0Z9 540 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 TTLL11Q8NHH1 800 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 FAM200AQ8TCP9 573 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 TBC1D5Q92609 795 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 ARHGEF1Q92888 912 aaKnown RBP8.2□□□□□ -1.1
PSEN1-201ENST00000324501 LLPHQ9BRT6 129 aaKnown RBP8.2□□□□□ -1.1
PSEN1-201ENST00000324501 GINS2Q9Y248 185 aa8.2□□□□□ -1.1
PSEN1-201ENST00000324501 SNAP25P60880 206 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 SNW1Q13573 536 aaKnown RBP8.19□□□□□ -1.1
PSEN1-201ENST00000324501 UBE4AQ14139 1066 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 CALCRLQ16602 461 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 GTF3C6Q969F1 213 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 SYNCQ9H7C4 482 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 JADE2Q9NQC1 790 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 KCNH3Q9ULD8 1083 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 RASEFQ8IZ41 740 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 UBXN4Q92575 508 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 MECOMQ03112 1051 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 UVSSAQ2YD98 709 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 IQUBQ8NA54 791 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 KIF18AQ8NI77 898 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 DCPSQ96C86 337 aaKnown RBP8.19□□□□□ -1.1
PSEN1-201ENST00000324501 RNF216Q9NWF9 866 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-201ENST00000324501 MED23Q9ULK4 1368 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 IRX3P78415 501 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-201ENST00000324501 SCRN1Q12765 414 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 LEO1Q8WVC0 666 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-201ENST00000324501 LEMD3Q9Y2U8 911 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 MROH2AA6NES4 1674 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 DCCP43146 1447 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 ALAS1P13196 640 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 ADD2P35612 726 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 CACNB3P54284 484 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 UBXN2AP68543 259 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 GRAPQ13588 217 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 NONOQ15233 471 aaKnown RBP eCLIP8.19□□□□□ -1.1
PSEN1-201ENST00000324501 RILPL1Q5EBL4 403 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 ZMYM1Q5SVZ6 1142 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 GRAPLQ8TC17 118 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-201ENST00000324501 SPAG5Q96R06 1193 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 CCDC113Q9H0I3 377 aa8.19□□□□□ -1.1
PSEN1-201ENST00000324501 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.19□□□□□ -1.1
PSEN1-201ENST00000324501 ERLIN1O75477 346 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 RPS6KA4O75676 772 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 XRCC6P12956 609 aaKnown RBP eCLIP8.18□□□□□ -1.1
PSEN1-201ENST00000324501 CTNNA2P26232 953 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 SLC16A2P36021 539 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 VPS72Q15906 364 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 SLC16A10Q8TF71 515 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 OSBP2Q969R2 916 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 ALS2CR12Q96Q35 445 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 RASGRF1Q13972 1273 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 PNMA1Q8ND90 353 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 SNX29Q8TEQ0 813 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 PGBD1Q96JS3 809 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 CTAGE1Q96RT6 745 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 ZSWIM6Q9HCJ5 1215 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 ZMYM6O95789 1325 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 H7C1W4 665 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 NOP56O00567 594 aaKnown RBP8.18□□□□□ -1.1
PSEN1-201ENST00000324501 AKR1B10O60218 316 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 GNG11P61952 73 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 ICA1Q05084 483 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 FAM160A1Q05DH4 1040 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 PNOCQ13519 176 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 RAPGEF1Q13905 1077 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 DCAF15Q66K64 600 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 CSRNP1Q96S65 589 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 TTC12Q9H892 705 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-201ENST00000324501 INCENPQ9NQS7 918 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 CSADQ9Y600 493 aa8.18□□□□□ -1.1
PSEN1-201ENST00000324501 KARSQ15046 597 aaKnown RBP8.18□□□□□ -1.1
PSEN1-201ENST00000324501 SMCR8Q8TEV9 937 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-201ENST00000324501 BCCIPQ9P287 314 aaKnown RBP eCLIP8.18□□□□□ -1.1
PSEN1-201ENST00000324501 SKILP12757 684 aa8.17□□□□□ -1.1
PSEN1-201ENST00000324501 MCAMP43121 646 aa8.17□□□□□ -1.1
PSEN1-201ENST00000324501 ABCB5Q2M3G0 1257 aa8.17□□□□□ -1.1
PSEN1-201ENST00000324501 VPS16Q9H269 839 aa8.17□□□□□ -1.1
PSEN1-201ENST00000324501 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-201ENST00000324501 TMEM232C9JQI7 657 aa8.17□□□□□ -1.1
PSEN1-201ENST00000324501 TECP42680 631 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms