RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 NR1I2O75469 434 aa10.58□□□□□ -0.72
CD46-202ENST00000322918 NR5A1Q13285 461 aa10.58□□□□□ -0.72
CD46-202ENST00000322918 STK38Q15208 465 aa10.58□□□□□ -0.72
CD46-202ENST00000322918 C12orf60Q5U649 245 aa10.58□□□□□ -0.72
CD46-202ENST00000322918 SGMS1Q86VZ5 419 aa10.58□□□□□ -0.72
CD46-202ENST00000322918 FBXO41Q8TF61 875 aa10.58□□□□□ -0.72
CD46-202ENST00000322918 SCAND2PQ9GZW5 306 aaPredicted RBP10.58□□□□□ -0.72
CD46-202ENST00000322918 COA1Q9GZY4 146 aa10.58□□□□□ -0.72
CD46-202ENST00000322918 ZNF277Q9NRM2 450 aaPredicted RBP10.58□□□□□ -0.72
CD46-202ENST00000322918 ECE2O60344 883 aa10.57□□□□□ -0.72
CD46-202ENST00000322918 CDKL5O76039 1030 aa10.57□□□□□ -0.72
CD46-202ENST00000322918 VEGFAP15692 232 aaPredicted RBP10.57□□□□□ -0.72
CD46-202ENST00000322918 NFIAQ12857 509 aa10.57□□□□□ -0.72
CD46-202ENST00000322918 NTRK3Q16288 839 aa10.57□□□□□ -0.72
CD46-202ENST00000322918 CSPP1Q1MSJ5 1256 aa10.57□□□□□ -0.72
CD46-202ENST00000322918 SYAP1Q96A49 352 aaPredicted RBP10.57□□□□□ -0.72
CD46-202ENST00000322918 ZSCAN16Q9H4T2 348 aaPredicted RBP10.57□□□□□ -0.72
CD46-202ENST00000322918 VAT1LQ9HCJ6 419 aa10.57□□□□□ -0.72
CD46-202ENST00000322918 MYH2Q9UKX2 1941 aa10.57□□□□□ -0.72
CD46-202ENST00000322918 MPHOSPH10O00566 681 aaKnown RBP10.57□□□□□ -0.72
CD46-202ENST00000322918 SPECC1Q5M775 1068 aa10.57□□□□□ -0.72
CD46-202ENST00000322918 DDX4Q9NQI0 724 aaKnown RBP10.57□□□□□ -0.72
CD46-202ENST00000322918 FLT1P17948 1338 aa10.57□□□□□ -0.72
CD46-202ENST00000322918 DPEP1P16444 411 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 R3HDM1Q15032 1099 aaKnown RBP10.56□□□□□ -0.72
CD46-202ENST00000322918 SEC23AQ15436 765 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 ZFPM1Q8IX07 1006 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 OXER1Q8TDS5 423 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 KAT14Q9H8E8 782 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 CFAP45Q9UL16 551 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 ZBTB12Q9Y330 459 aaPredicted RBP10.56□□□□□ -0.72
CD46-202ENST00000322918 A0A1B0GVL5 298 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 NBPF11Q86T75 865 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 HOMER1Q86YM7 354 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 STAG2Q8N3U4 1231 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 TBC1D22AQ8WUA7 517 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 RHBDL3P58872 404 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 KIF23Q02241 960 aaPredicted RBP10.56□□□□□ -0.72
CD46-202ENST00000322918 LRSAM1Q6UWE0 723 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 CCAR1Q8IX12 1150 aaKnown RBP10.56□□□□□ -0.72
CD46-202ENST00000322918 CTCFLQ8NI51 663 aaPredicted RBP10.56□□□□□ -0.72
CD46-202ENST00000322918 EYA3Q99504 573 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 IL17RBQ9NRM6 502 aa10.56□□□□□ -0.72
CD46-202ENST00000322918 GPR75-ASB3A0A0A6YYF3 556 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 FAM205CA6NFA0 338 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 CDK8P49336 464 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 SHROOM1Q2M3G4 852 aaPredicted RBP10.55□□□□□ -0.72
CD46-202ENST00000322918 CCDC183Q5T5S1 534 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 DIS3L2Q8IYB7 885 aaKnown RBP10.55□□□□□ -0.72
CD46-202ENST00000322918 FBXL16Q8N461 479 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 CRACR2BQ8N4Y2 399 aaPredicted RBP10.55□□□□□ -0.72
CD46-202ENST00000322918 GPKOWQ92917 476 aaPredicted RBP eCLIP10.55□□□□□ -0.727e-22■□□□□ 10.2
CD46-202ENST00000322918 ARID3AQ99856 593 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 A0A1B0GUL6 1792 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 WDR19Q8NEZ3 1342 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 MYSM1Q5VVJ2 828 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 TMTC2Q8N394 836 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 PNMA1Q8ND90 353 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 CNKSR1Q969H4 720 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 ZNF396Q96N95 335 aaPredicted RBP10.55□□□□□ -0.72
CD46-202ENST00000322918 TSPY26PQ9H489 355 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 MRVI1Q9Y6F6 885 aa10.55□□□□□ -0.72
CD46-202ENST00000322918 CLRN2A0PK11 232 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 NOM1Q5C9Z4 860 aaKnown RBP10.54□□□□□ -0.72
CD46-202ENST00000322918 SAMD1Q6SPF0 538 aaPredicted RBP10.54□□□□□ -0.72
CD46-202ENST00000322918 LARGE2Q8N3Y3 721 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 FSIP1Q8NA03 581 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 TEKT1Q969V4 418 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 NUP62CLQ9H1M0 184 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 TNMDQ9H2S6 317 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 FAM13BQ9NYF5 915 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.54□□□□□ -0.72
CD46-202ENST00000322918 PDS5AQ29RF7 1337 aaKnown RBP10.54□□□□□ -0.72
CD46-202ENST00000322918 CCDC196A0A1B0GTZ2 297 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 FMNL1O95466 1100 aaPredicted RBP10.54□□□□□ -0.72
CD46-202ENST00000322918 IFNAR1P17181 557 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 CRKP46108 304 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 TROAPQ12815 778 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 ISM2Q6H9L7 571 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 CDC42EP5Q6NZY7 148 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 C15orf52Q6ZUT6 534 aaKnown RBP10.54□□□□□ -0.72
CD46-202ENST00000322918 TMC4Q7Z404 712 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 LRRC47Q8N1G4 583 aaKnown RBP10.54□□□□□ -0.72
CD46-202ENST00000322918 SRBD1Q8N5C6 995 aaKnown RBP10.54□□□□□ -0.72
CD46-202ENST00000322918 TMEM87AQ8NBN3 555 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 ANP32BQ92688 251 aaKnown RBP10.54□□□□□ -0.72
CD46-202ENST00000322918 CLIC6Q96NY7 704 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 GOLPH3LQ9H4A5 285 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 TDRD3Q9H7E2 651 aaKnown RBP10.54□□□□□ -0.72
CD46-202ENST00000322918 CABP5Q9NP86 173 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 MKRN1Q9UHC7 482 aaKnown RBP10.54□□□□□ -0.72
CD46-202ENST00000322918 CHD4Q14839 1912 aa10.54□□□□□ -0.72
CD46-202ENST00000322918 RASA1P20936 1047 aa10.53□□□□□ -0.72
CD46-202ENST00000322918 ZNF445P59923 1031 aa10.53□□□□□ -0.72
CD46-202ENST00000322918 SAFBQ15424 915 aaKnown RBP eCLIP10.53□□□□□ -0.726e-6■□□□□ 10.7
CD46-202ENST00000322918 RCSD1Q6JBY9 416 aa10.53□□□□□ -0.72
CD46-202ENST00000322918 USP17L2Q6R6M4 530 aa10.53□□□□□ -0.72
CD46-202ENST00000322918 SLF2Q8IX21 1173 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms