RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 ANKRD18AQ8IVF6 992 aa16.94■□□□□ 0.3
SCAP-202ENST00000320017 MCM8Q9UJA3 840 aa16.94■□□□□ 0.3
SCAP-202ENST00000320017 NFE2L3Q9Y4A8 694 aa16.94■□□□□ 0.3
SCAP-202ENST00000320017 PRPF6O94906 941 aaKnown RBP16.93■□□□□ 0.3
SCAP-202ENST00000320017 ZNF827Q17R98 1081 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 KLC4Q9NSK0 619 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 NFAT5O94916 1531 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 AKR1B15C9JRZ8 316 aaPredicted RBP16.93■□□□□ 0.3
SCAP-202ENST00000320017 PFKFB2O60825 505 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 RAD9BQ6WBX8 426 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 KCNG4Q8TDN1 519 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 CCDC114Q96M63 670 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 INTS13Q9NVM9 706 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCAP-202ENST00000320017 MEGF6O75095 1541 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 B4GALNT4Q76KP1 1039 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 JMYQ8N9B5 988 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCAP-202ENST00000320017 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
SCAP-202ENST00000320017 COL15A1P39059 1388 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 EIF3HO15372 352 aaKnown RBP eCLIP16.92■□□□□ 0.3
SCAP-202ENST00000320017 TTLL7Q6ZT98 887 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 CCDC82Q8N4S0 544 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 HSD3B7Q9H2F3 369 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 ADGRG1Q9Y653 693 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 KRT32Q14532 448 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 NBPF20Q3BBV1 942 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 LRRC24Q50LG9 513 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 KCTD16Q68DU8 428 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 KLHL10Q6JEL2 608 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 PI16Q6UXB8 463 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 SND1Q7KZF4 910 aaKnown RBP eCLIP16.92■□□□□ 0.3
SCAP-202ENST00000320017 LINC00301Q8NCQ3 95 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 STAG1Q8WVM7 1258 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 GUCA1BQ9UMX6 200 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 NWD1Q149M9 1564 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 CCNHP51946 323 aaPredicted RBP16.92■□□□□ 0.3
SCAP-202ENST00000320017 MRPS25P82663 173 aaKnown RBP16.92■□□□□ 0.3
SCAP-202ENST00000320017 PTPN12Q05209 780 aaKnown RBP16.92■□□□□ 0.3
SCAP-202ENST00000320017 PDIA6Q15084 440 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 WHAMMP3Q1A5X7 153 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 GRIPAP1Q4V328 841 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 MYO6Q9UM54 1294 aa16.92■□□□□ 0.3
SCAP-202ENST00000320017 C21orf2O43822 256 aa16.91■□□□□ 0.3
SCAP-202ENST00000320017 CCDC40Q4G0X9 1142 aa16.91■□□□□ 0.3
SCAP-202ENST00000320017 COG1Q8WTW3 980 aa16.91■□□□□ 0.3
SCAP-202ENST00000320017 PUS3Q9BZE2 481 aaKnown RBP16.91■□□□□ 0.3
SCAP-202ENST00000320017 WDR17Q8IZU2 1322 aa16.91■□□□□ 0.3
SCAP-202ENST00000320017 IFT88Q13099 833 aa16.91■□□□□ 0.3
SCAP-202ENST00000320017 TBC1D22AQ8WUA7 517 aa16.91■□□□□ 0.3
SCAP-202ENST00000320017 KCNB2Q92953 911 aa16.91■□□□□ 0.3
SCAP-202ENST00000320017 C8orf76Q96K31 380 aa16.91■□□□□ 0.3
SCAP-202ENST00000320017 ASAP1Q9ULH1 1129 aa16.91■□□□□ 0.3
SCAP-202ENST00000320017 PDHBP11177 359 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 SELENOOQ9BVL4 669 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 HMG20BQ9P0W2 317 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 CPSF2Q9P2I0 782 aaKnown RBP16.9■□□□□ 0.3
SCAP-202ENST00000320017 A0A1W2PQ27 194 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 A0A1W2PQ64 194 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 A0A1W2PQD8 194 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 SRGAP2O75044 1071 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 ABL1P00519 1130 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 TUBBP07437 444 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 SSR1P43307 286 aaKnown RBP16.9■□□□□ 0.3
SCAP-202ENST00000320017 IRX1P78414 480 aaPredicted RBP16.9■□□□□ 0.3
SCAP-202ENST00000320017 PREPLQ4J6C6 727 aaPredicted RBP16.9■□□□□ 0.3
SCAP-202ENST00000320017 LMTK3Q96Q04 1460 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 MEFVO15553 781 aaPredicted RBP16.9■□□□□ 0.3
SCAP-202ENST00000320017 ARHGAP25P42331 645 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
SCAP-202ENST00000320017 MICALCLQ6ZW33 695 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 HDAC6Q9UBN7 1215 aa16.9■□□□□ 0.3
SCAP-202ENST00000320017 RTEL1Q9NZ71 1219 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 KIF3CO14782 793 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 HOXB7P09629 217 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 IFIT1P09914 478 aaKnown RBP16.89■□□□□ 0.29
SCAP-202ENST00000320017 AIFM3Q96NN9 605 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 SPATS2LQ9NUQ6 558 aaKnown RBP16.89■□□□□ 0.29
SCAP-202ENST00000320017 LTN1O94822 1766 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 ENO4A6NNW6 628 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 CPLX1O14810 134 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCAP-202ENST00000320017 SNCBQ16143 134 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 SPECC1Q5M775 1068 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 ILDR1Q86SU0 546 aaPredicted RBP16.89■□□□□ 0.29
SCAP-202ENST00000320017 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 IRAK4Q9NWZ3 460 aa16.89■□□□□ 0.29
SCAP-202ENST00000320017 ERCC3P19447 782 aa16.88■□□□□ 0.29
SCAP-202ENST00000320017 STX17P56962 302 aa16.88■□□□□ 0.29
SCAP-202ENST00000320017 PDE4BQ07343 736 aa16.88■□□□□ 0.29
SCAP-202ENST00000320017 SH2D3CQ8N5H7 860 aa16.88■□□□□ 0.29
SCAP-202ENST00000320017 KIF9Q9HAQ2 790 aa16.88■□□□□ 0.29
SCAP-202ENST00000320017 DENND2AQ9ULE3 1009 aa16.88■□□□□ 0.29
SCAP-202ENST00000320017 TUBB4BP68371 445 aa16.88■□□□□ 0.29
SCAP-202ENST00000320017 MSL3Q8N5Y2 521 aaKnown RBP16.88■□□□□ 0.29
SCAP-202ENST00000320017 NOC3LQ8WTT2 800 aaKnown RBP16.88■□□□□ 0.29
SCAP-202ENST00000320017 TBC1D31Q96DN5 1066 aa16.88■□□□□ 0.29
SCAP-202ENST00000320017 TACO1Q9BSH4 297 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms