RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 FGAP02671 866 aa12.17□□□□□ -0.46
HNF4A-201ENST00000316099 MATR3P43243 847 aaKnown RBP eCLIP12.17□□□□□ -0.46
HNF4A-201ENST00000316099 CCDC40Q4G0X9 1142 aa12.17□□□□□ -0.46
HNF4A-201ENST00000316099 ZNF34Q8IZ26 560 aa12.17□□□□□ -0.46
HNF4A-201ENST00000316099 ANKS4BQ8N8V4 417 aa12.17□□□□□ -0.46
HNF4A-201ENST00000316099 PUS7LQ9H0K6 701 aaKnown RBP12.17□□□□□ -0.46
HNF4A-201ENST00000316099 INTS5Q6P9B9 1019 aaKnown RBP12.16□□□□□ -0.46
HNF4A-201ENST00000316099 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
HNF4A-201ENST00000316099 STAMBPO95630 424 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 TRIM21P19474 475 aaKnown RBP12.16□□□□□ -0.46
HNF4A-201ENST00000316099 CCDC96Q2M329 555 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.16□□□□□ -0.46
HNF4A-201ENST00000316099 TRIM47Q96LD4 638 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 CAMTA2O94983 1202 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 RRAGBQ5VZM2 374 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 OTUD6BQ8N6M0 293 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 VIRMAQ69YN4 1812 aaKnown RBP12.16□□□□□ -0.46
HNF4A-201ENST00000316099 JAK2O60674 1132 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 IFIT1BQ5T764 474 aaKnown RBP12.16□□□□□ -0.46
HNF4A-201ENST00000316099 CRACR2BQ8N4Y2 399 aaPredicted RBP12.16□□□□□ -0.46
HNF4A-201ENST00000316099 AATFQ9NY61 560 aaKnown RBP eCLIP12.16□□□□□ -0.46
HNF4A-201ENST00000316099 BRD1O95696 1058 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 KRBA2Q6ZNG9 492 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.16□□□□□ -0.46
HNF4A-201ENST00000316099 KDM3BQ7LBC6 1761 aa12.16□□□□□ -0.46
HNF4A-201ENST00000316099 AKR1B10O60218 316 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 ADD2P35612 726 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 TTLL12Q14166 644 aaPredicted RBP12.15□□□□□ -0.46
HNF4A-201ENST00000316099 ROBO1Q9Y6N7 1651 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 ABCC6O95255 1503 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 KRT86O43790 486 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 CSF1RP07333 972 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 SELENOOQ9BVL4 669 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 PIH1D3Q9NQM4 214 aaKnown RBP12.15□□□□□ -0.46
HNF4A-201ENST00000316099 NARFQ9UHQ1 456 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 GGA1Q9UJY5 639 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.15□□□□□ -0.46
HNF4A-201ENST00000316099 RTN1Q16799 776 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 C10orf67Q8IYJ2 551 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 CHAMP1Q96JM3 812 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 RIPOR2Q9Y4F9 1068 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 UBE4AQ14139 1066 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 FAM76AQ8TAV0 307 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 MCM9Q9NXL9 1143 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 PHLPP1O60346 1717 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 SPTLC2O15270 562 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 CHGBP05060 677 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 HOOK3Q86VS8 718 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 EXOC1Q9NV70 894 aa12.15□□□□□ -0.46
HNF4A-201ENST00000316099 LARGE1O95461 756 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 KIF5BP33176 963 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
HNF4A-201ENST00000316099 ARFGAP2Q8N6H7 521 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 ATRIPQ8WXE1 791 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 RASAL2Q9UJF2 1139 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 AFDNP55196 1824 aaKnown RBP12.14□□□□□ -0.47
HNF4A-201ENST00000316099 STRCP1A6NGW2 1772 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 NOP2P46087 812 aaKnown RBP12.14□□□□□ -0.47
HNF4A-201ENST00000316099 CUL4AQ13619 759 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 UBE3CQ15386 1083 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 ARHGEF1Q92888 912 aaKnown RBP12.14□□□□□ -0.47
HNF4A-201ENST00000316099 GTF3C6Q969F1 213 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 IFNKQ9P0W0 207 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 CASP7P55210 303 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 CDC37L1Q7L3B6 337 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 TRMT1LQ7Z2T5 733 aaKnown RBP12.14□□□□□ -0.47
HNF4A-201ENST00000316099 UBN2Q6ZU65 1347 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 FSD2A1L4K1 749 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 IFNL3Q8IZI9 196 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 TMTC2Q8N394 836 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 LMBRD1Q9NUN5 540 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 CETN1Q12798 172 aa12.14□□□□□ -0.47
HNF4A-201ENST00000316099 ZNF500O60304 480 aaPredicted RBP12.13□□□□□ -0.47
HNF4A-201ENST00000316099 CCDC172P0C7W6 258 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 UBA7P41226 1012 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 EVCP57679 992 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 PPP2R3AQ06190 1150 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 RASGRF1Q13972 1273 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 SCARF1Q14162 830 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 KIAA0753Q2KHM9 967 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 BRAPQ7Z569 592 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 ZC3H12CQ9C0D7 883 aaKnown RBP12.13□□□□□ -0.47
HNF4A-201ENST00000316099 KAT14Q9H8E8 782 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 TNIP1Q15025 636 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 CTNNBL1Q8WYA6 563 aaPredicted RBP12.13□□□□□ -0.47
HNF4A-201ENST00000316099 ANGEL1Q9UNK9 670 aaKnown RBP12.13□□□□□ -0.47
HNF4A-201ENST00000316099 CYP2E1P05181 493 aaPredicted RBP12.13□□□□□ -0.47
HNF4A-201ENST00000316099 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
HNF4A-201ENST00000316099 RNF216Q9NWF9 866 aaPredicted RBP12.13□□□□□ -0.47
HNF4A-201ENST00000316099 COL14A1Q05707 1796 aaKnown RBP12.13□□□□□ -0.47
HNF4A-201ENST00000316099 MYCNP04198 464 aaPredicted RBP12.13□□□□□ -0.47
HNF4A-201ENST00000316099 FAM173BQ6P4H8 233 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 SPATA24Q86W54 205 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 ZNF804BA4D1E1 1349 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 KIF4AO95239 1232 aa12.13□□□□□ -0.47
HNF4A-201ENST00000316099 U2AF2P26368 475 aaKnown RBP eCLIP12.13□□□□□ -0.471e-26■□□□□ 8.9
HNF4A-201ENST00000316099 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms