RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 CLIC4Q9Y696 253 aa19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 A0A1W2PQ27 194 aa19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 A0A1W2PQ64 194 aa19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 A0A1W2PQD8 194 aa19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 SLC3A2P08195 630 aaKnown RBP19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 LINC00301Q8NCQ3 95 aa19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 B4E1Z4 1266 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 TUBB4AP04350 444 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 MMP10P09238 476 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 NCAPHQ15003 741 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 ISM2Q6H9L7 571 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 MB21D2Q8IYB1 491 aaPredicted RBP19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 NEDD4P46934 1319 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 PHLPP2Q6ZVD8 1323 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 URI1O94763 535 aaPredicted RBP19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 POLR3DP05423 398 aaPredicted RBP19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 PDIA3P30101 505 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 FANCCQ00597 558 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 MECOMQ03112 1051 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 CYB5R4Q7L1T6 521 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 RALYLQ86SE5 291 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 NCOA7Q8NI08 942 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 RBM17Q96I25 401 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 IRS2Q9Y4H2 1338 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 A0A1B0GUL6 1792 aa19.71■□□□□ 0.75
SCAMP4-201ENST00000316097 SEC31AO94979 1220 aaKnown RBP19.7■□□□□ 0.74
SCAMP4-201ENST00000316097 NLRP12P59046 1061 aa19.7■□□□□ 0.74
SCAMP4-201ENST00000316097 GRIK5Q16478 980 aa19.7■□□□□ 0.74
SCAMP4-201ENST00000316097 SENP2Q9HC62 589 aa19.7■□□□□ 0.74
SCAMP4-201ENST00000316097 PNPLA7Q6ZV29 1317 aa19.7■□□□□ 0.74
SCAMP4-201ENST00000316097 LAMA4Q16363 1823 aa19.7■□□□□ 0.74
SCAMP4-201ENST00000316097 UFL1O94874 794 aa19.7■□□□□ 0.74
SCAMP4-201ENST00000316097 ATP1A3P13637 1013 aa19.7■□□□□ 0.74
SCAMP4-201ENST00000316097 TDO2P48775 406 aa19.7■□□□□ 0.74
SCAMP4-201ENST00000316097 CARD6Q9BX69 1037 aa19.7■□□□□ 0.74
SCAMP4-201ENST00000316097 MAGEB6P1A0A0J9YX57 407 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 FDPSP14324 419 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 CAPN2P17655 700 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 EVX2Q03828 476 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 DHX8Q14562 1220 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 NLGN1Q8N2Q7 840 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 AGXT2Q9BYV1 514 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 CYP2D7A0A087X1C5 515 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 TULP2O00295 520 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 FANCGO15287 622 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 CCP110O43303 1012 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 TADA3O75528 432 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 XDHP47989 1333 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 TEX35Q5T0J7 233 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 TRIM65Q6PJ69 517 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 NSUN4Q96CB9 384 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 ZNF202O95125 648 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 RRP12Q5JTH9 1297 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 NEK11Q8NG66 645 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 KCNG4Q8TDN1 519 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 RIOK1Q9BRS2 568 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 AATFQ9NY61 560 aaKnown RBP eCLIP19.69■□□□□ 0.745e-6■■□□□ 11.7
SCAMP4-201ENST00000316097 POLLQ9UGP5 575 aa19.69■□□□□ 0.74
SCAMP4-201ENST00000316097 MINDY4BA8MYZ0 360 aa19.68■□□□□ 0.74
SCAMP4-201ENST00000316097 SPTLC2O15270 562 aa19.68■□□□□ 0.74
SCAMP4-201ENST00000316097 SLC4A8Q2Y0W8 1093 aa19.68■□□□□ 0.74
SCAMP4-201ENST00000316097 PDGFDQ9GZP0 370 aaPredicted RBP19.68■□□□□ 0.74
SCAMP4-201ENST00000316097 EPC1Q9H2F5 836 aa19.68■□□□□ 0.74
SCAMP4-201ENST00000316097 TOMM22Q9NS69 142 aa19.68■□□□□ 0.74
SCAMP4-201ENST00000316097 RXRAP19793 462 aa19.68■□□□□ 0.74
SCAMP4-201ENST00000316097 GOLGA8FQ08AF8 430 aa19.67■□□□□ 0.74
SCAMP4-201ENST00000316097 GOLGA8DPQ0D2H9 430 aa19.67■□□□□ 0.74
SCAMP4-201ENST00000316097 TRDNQ13061 729 aa19.67■□□□□ 0.74
SCAMP4-201ENST00000316097 FAM177A1Q8N128 213 aaPredicted RBP19.67■□□□□ 0.74
SCAMP4-201ENST00000316097 ZNF274Q96GC6 653 aaPredicted RBP19.67■□□□□ 0.74
SCAMP4-201ENST00000316097 ZKSCAN3Q9BRR0 538 aa19.67■□□□□ 0.74
SCAMP4-201ENST00000316097 TAOK2Q9UL54 1235 aa19.67■□□□□ 0.74
SCAMP4-201ENST00000316097 LEMD3Q9Y2U8 911 aa19.67■□□□□ 0.74
SCAMP4-201ENST00000316097 DPF2Q92785 391 aa19.67■□□□□ 0.74
SCAMP4-201ENST00000316097 SRRTQ9BXP5 876 aaKnown RBP19.67■□□□□ 0.74
SCAMP4-201ENST00000316097 DOCK2Q92608 1830 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 KLF18A0A0U1RQI7 1052 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 EVCP57679 992 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 MAPK8IP2Q13387 824 aaPredicted RBP19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 PTPN21Q16825 1174 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 C8orf76Q96K31 380 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 EFCAB8A8MWE9 144 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 C6orf229H3BNL8 230 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 RIMBP2O15034 1052 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 YEATS4O95619 227 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 SERPINC1P01008 464 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 UBASH3AP57075 661 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 REXO1L1PQ8IX06 675 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 PARP3Q9Y6F1 533 aa19.66■□□□□ 0.74
SCAMP4-201ENST00000316097 PFKFB1P16118 471 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 DIXDC1Q155Q3 683 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 ALX1Q15699 326 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 HSD3B7Q9H2F3 369 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 POLR3EQ9NVU0 708 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 ZSWIM5Q9P217 1185 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 BBOX1O75936 387 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 HOXA10P31260 410 aaPredicted RBP19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 CFAP100Q494V2 611 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 MYSM1Q5VVJ2 828 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms