RNA–Protein interactions for RNA: ENST00000307216.10

TMEM87A-201, Transcript of transmembrane protein 87A, humanhuman

TSL 1 (best) BASIC

Gene TMEM87A, Length 1,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-201ENST00000307216 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.21
TMEM87A-201ENST00000307216 CLIP2Q9UDT6 1046 aa16.39■□□□□ 0.21
TMEM87A-201ENST00000307216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
TMEM87A-201ENST00000307216 XDHP47989 1333 aa16.39■□□□□ 0.21
TMEM87A-201ENST00000307216 UBR3Q6ZT12 1888 aa16.39■□□□□ 0.21
TMEM87A-201ENST00000307216 IKBKBO14920 756 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 LDHCP07864 332 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 TM4SF1P30408 202 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 ZNF804AQ7Z570 1209 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 DZIP1Q86YF9 867 aaKnown RBP16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 DHX40Q8IX18 779 aaKnown RBP16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 ENAHQ8N8S7 591 aaPredicted RBP16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 CNBD1Q8NA66 436 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 NUP133Q8WUM0 1156 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 ZKSCAN3Q9BRR0 538 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 BCL11BQ9C0K0 894 aaPredicted RBP16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 GJB4Q9NTQ9 266 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 DNTTIP2Q5QJE6 756 aaKnown RBP16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 KANK3Q6NY19 840 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 SPC24Q8NBT2 197 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 DCP1AQ9NPI6 582 aaPredicted RBP16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 TUBE1Q9UJT0 475 aa16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 R3HCC1Q9Y3T6 440 aaKnown RBP16.38■□□□□ 0.21
TMEM87A-201ENST00000307216 IRS2Q9Y4H2 1338 aa16.37■□□□□ 0.21
TMEM87A-201ENST00000307216 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
TMEM87A-201ENST00000307216 BAG3O95817 575 aa16.37■□□□□ 0.21
TMEM87A-201ENST00000307216 GSDMDP57764 484 aa16.37■□□□□ 0.21
TMEM87A-201ENST00000307216 DYNLL1P63167 89 aaKnown RBP16.37■□□□□ 0.21
TMEM87A-201ENST00000307216 CTCFLQ8NI51 663 aaPredicted RBP16.37■□□□□ 0.21
TMEM87A-201ENST00000307216 CERKQ8TCT0 537 aa16.37■□□□□ 0.21
TMEM87A-201ENST00000307216 IMPACTQ9P2X3 320 aa16.37■□□□□ 0.21
TMEM87A-201ENST00000307216 NAV1Q8NEY1 1877 aa16.37■□□□□ 0.21
TMEM87A-201ENST00000307216 USP17L12C9JPN9 530 aa16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 USP17L21D6R901 530 aa16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 MARCKSP29966 332 aaPredicted RBP16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 KIF5BP33176 963 aa16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 KRT2P35908 639 aa16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 CHAF1AQ13111 956 aaPredicted RBP16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 SLC27A3Q5K4L6 730 aa16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 MEX3CQ5U5Q3 659 aaKnown RBP16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 CCDC186Q7Z3E2 898 aa16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 MROH7-TTC4A0A0A0MT08 1334 aa16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 ROBO3Q96MS0 1386 aa16.36■□□□□ 0.21
TMEM87A-201ENST00000307216 BTBD18B2RXH4 712 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 LDHBP07195 334 aaKnown RBP16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 PTPREP23469 700 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 KCNQ4P56696 695 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 ST5P78524 1137 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 SHC4Q6S5L8 630 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 AOPEPQ8N6M6 819 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 ZNF384Q8TF68 577 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 ZNF830Q96NB3 372 aaPredicted RBP16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 KCNF1Q9H3M0 494 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 ZNF287Q9HBT7 754 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 DACH1Q9UI36 760 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 TRPC5Q9UL62 973 aaPredicted RBP16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 KCNH3Q9ULD8 1083 aa16.35■□□□□ 0.21
TMEM87A-201ENST00000307216 DYNC1I1O14576 645 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 PTGS1P23219 599 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 PPP4CP60510 307 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 TROAPQ12815 778 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 OLFM4Q6UX06 510 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 KRBA2Q6ZNG9 492 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 TMTC3Q6ZXV5 915 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 SLF2Q8IX21 1173 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 AATFQ9NY61 560 aaKnown RBP eCLIP16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 TFCP2L1Q9NZI6 479 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 ZBTB12Q9Y330 459 aaPredicted RBP16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 SRPRBQ9Y5M8 271 aaKnown RBP16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 NRDCO43847 1150 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 TRAPPC10P48553 1259 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 GNAQP50148 359 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 NFIXQ14938 502 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 CT47A1Q5JQC4 288 aaPredicted RBP16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 DGKHQ86XP1 1220 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 TRIML1Q8N9V2 468 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 CNNM3Q8NE01 707 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 ANKS1AQ92625 1134 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 FERMT2Q96AC1 680 aa16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 RBM17Q96I25 401 aaKnown RBP16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 PYM1Q9BRP8 204 aaKnown RBP16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
TMEM87A-201ENST00000307216 TRIM75PA6NK02 468 aa16.33■□□□□ 0.2
TMEM87A-201ENST00000307216 PLCG2P16885 1265 aa16.33■□□□□ 0.2
TMEM87A-201ENST00000307216 PRDX5P30044 214 aa16.33■□□□□ 0.2
TMEM87A-201ENST00000307216 GUCY1A2P33402 732 aa16.33■□□□□ 0.2
TMEM87A-201ENST00000307216 FUT2Q10981 343 aa16.33■□□□□ 0.2
TMEM87A-201ENST00000307216 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
TMEM87A-201ENST00000307216 PTF1AQ7RTS3 328 aa16.33■□□□□ 0.2
TMEM87A-201ENST00000307216 FBXO2Q9UK22 296 aaPredicted RBP16.33■□□□□ 0.2
TMEM87A-201ENST00000307216 LRRC37AA6NMS7 1700 aa16.32■□□□□ 0.2
TMEM87A-201ENST00000307216 TSPY2A6NKD2 308 aa16.32■□□□□ 0.2
TMEM87A-201ENST00000307216 CBFA2T2O43439 604 aa16.32■□□□□ 0.2
TMEM87A-201ENST00000307216 KLRK1P26718 216 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms