RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 EXOC7Q9UPT5 735 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 MROH1Q8NDA8 1641 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 GOLGA4Q13439 2230 aaKnown RBP9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 DYNC1I1O14576 645 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 NOL3O60936 208 aaKnown RBP9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 MBD4O95243 580 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 SPAG5Q96R06 1193 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 ABCC12Q96J65 1359 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 OSBPP22059 807 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 TPD52P55327 224 aaPredicted RBP9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 STX1AQ16623 288 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 ARID4AP29374 1257 aaPredicted RBP9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 CCDC144CPQ8IYA2 1237 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 JAKMIP2Q96AA8 810 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 SOS2Q07890 1332 aaPredicted RBP9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 AFDNP55196 1824 aaKnown RBP9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 RGL2O15211 777 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 GPAA1O43292 621 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 TTC14Q96N46 770 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 JPH2Q9BR39 696 aaPredicted RBP9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 FMN2Q9NZ56 1722 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 HAND2P61296 217 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 CFAP58Q5T655 872 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 AZI2Q9H6S1 392 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 ALDH3A1P30838 453 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 RNF187Q5TA31 235 aaPredicted RBP9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 NLRX1Q86UT6 975 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 LMBR1Q8WVP7 490 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 MRPL11Q9Y3B7 192 aaKnown RBP9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 FAM169AQ9Y6X4 670 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 PHLPP1O60346 1717 aa9.34□□□□□ -0.91
PCDHB1-201ENST00000306549 ZBTB7BO15156 539 aaPredicted RBP9.34□□□□□ -0.92
PCDHB1-201ENST00000306549 CCDC65Q8IXS2 484 aa9.34□□□□□ -0.92
PCDHB1-201ENST00000306549 CCDC63Q8NA47 563 aa9.34□□□□□ -0.92
PCDHB1-201ENST00000306549 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.34□□□□□ -0.92
PCDHB1-201ENST00000306549 hCG_1984214I3L0E3 225 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 ZEB2O60315 1214 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 ZBTB16Q05516 673 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 ZNF713Q8N859 430 aaPredicted RBP9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 CCDC89Q8N998 374 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 BSDC1Q9NW68 430 aaPredicted RBP9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 MAATS1Q7Z4T9 603 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 CCDC110Q8TBZ0 833 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 ABCC4O15439 1325 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 FAM13AO94988 1023 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 CCT2P78371 535 aaKnown RBP9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 GRAPQ13588 217 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 UBE3CQ15386 1083 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 OTUD6AQ7L8S5 288 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 PODNQ7Z5L7 613 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 GRAPLQ8TC17 118 aaPredicted RBP9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 RRAGBQ5VZM2 374 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 CGNQ9P2M7 1197 aaKnown RBP9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 BACH1O14867 736 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 KRT25Q7Z3Z0 450 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 FAM114A2Q9NRY5 505 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 IQSEC3Q9UPP2 1182 aaPredicted RBP9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 COL15A1P39059 1388 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 CTR9Q6PD62 1173 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 RUFY3Q7L099 469 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 GSTA5Q7RTV2 222 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 SSH3Q8TE77 659 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 MRVI1Q9Y6F6 885 aa9.33□□□□□ -0.92
PCDHB1-201ENST00000306549 MMP10P09238 476 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 NLRP10Q86W26 655 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 GSDMBQ8TAX9 411 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 SNX21Q969T3 373 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 TRIM47Q96LD4 638 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 FDX1P10109 184 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 SYKP43405 635 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 GTF2IP78347 998 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 USPL1Q5W0Q7 1092 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 CREB3L3Q68CJ9 461 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 MAK16Q9BXY0 300 aaKnown RBP9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 NR1I2O75469 434 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 URI1O94763 535 aaPredicted RBP9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 KDM3AQ9Y4C1 1321 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 CRCPO75575 148 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 HOXD10P28358 340 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 NMIQ13287 307 aaPredicted RBP9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 IQUBQ8NA54 791 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 USP40Q9NVE5 1235 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 ASAP1Q9ULH1 1129 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 TUBB4BP68371 445 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 CUL4BQ13620 913 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 CCDC6Q16204 474 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 Q6ZUG5 572 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 NCAPGQ9BPX3 1015 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 PRR36Q9H6K5 1346 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 ARHGEF37A1IGU5 675 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 ELMSAN1Q6PJG2 1045 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 HELBQ8NG08 1087 aaPredicted RBP9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 PIGBQ92521 554 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 MMRN2Q9H8L6 949 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 JADE2Q9NQC1 790 aa9.32□□□□□ -0.92
PCDHB1-201ENST00000306549 CERKLQ49MI3 558 aaPredicted RBP9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 AATFQ9NY61 560 aaKnown RBP eCLIP9.31□□□□□ -0.92
PCDHB1-201ENST00000306549 HSF2BPO75031 334 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms