RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 CLIC6Q96NY7 704 aa9.06□□□□□ -0.96
NKRF-201ENST00000304449 SLC4A9Q96Q91 983 aa9.06□□□□□ -0.96
NKRF-201ENST00000304449 ALG1Q9BT22 464 aa9.06□□□□□ -0.96
NKRF-201ENST00000304449 GREM2Q9H772 168 aa9.06□□□□□ -0.96
NKRF-201ENST00000304449 VWA3AA6NCI4 1184 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 IVLP07476 585 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 SYKP43405 635 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 WASHC4Q2M389 1173 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 APTXQ7Z2E3 356 aaKnown RBP9.05□□□□□ -0.96
NKRF-201ENST00000304449 NLRP10Q86W26 655 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 FCHSD1Q86WN1 690 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 CICQ96RK0 1608 aaPredicted RBP9.05□□□□□ -0.96
NKRF-201ENST00000304449 FOXN1O15353 648 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 ZSCAN12O43309 604 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 ATF3P18847 181 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 TOGARAM2Q6ZUX3 1019 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 DHX37Q8IY37 1157 aaKnown RBP9.05□□□□□ -0.96
NKRF-201ENST00000304449 BANK1Q8NDB2 785 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 CNNM3Q8NE01 707 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 PHKBQ93100 1093 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 TMEM87BQ96K49 555 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 INCENPQ9NQS7 918 aa9.05□□□□□ -0.96
NKRF-201ENST00000304449 FBXO2Q9UK22 296 aaPredicted RBP9.05□□□□□ -0.96
NKRF-201ENST00000304449 SOS2Q07890 1332 aaPredicted RBP9.05□□□□□ -0.96
NKRF-201ENST00000304449 CUTAO60888 179 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 FMNL1O95466 1100 aaPredicted RBP9.04□□□□□ -0.96
NKRF-201ENST00000304449 ITGA6P23229 1130 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 METAP2P50579 478 aaKnown RBP eCLIP9.04□□□□□ -0.96
NKRF-201ENST00000304449 CHMP4BP1P59074 171 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 MYL5Q02045 173 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 PPARDQ03181 441 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 GRIN1Q05586 938 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 ABCB6Q9NP58 842 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 SEC31BQ9NQW1 1179 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 WWC3Q9ULE0 1092 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 WNK3Q9BYP7 1800 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 CCP110O43303 1012 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 PDE8BO95263 885 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 PDE6AP16499 860 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 GUCY1A2P33402 732 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 CTSWP56202 376 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 IFIT5Q13325 482 aaKnown RBP9.04□□□□□ -0.96
NKRF-201ENST00000304449 MTF1Q14872 753 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 CT47A1Q5JQC4 288 aaPredicted RBP9.04□□□□□ -0.96
NKRF-201ENST00000304449 SLC9C2Q5TAH2 1124 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 SYNE3Q6ZMZ3 975 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 BRINP3Q76B58 766 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 ZSWIM5Q9P217 1185 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 PCDHA5Q9Y5H7 936 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 ZNF532Q9HCE3 1301 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 CASZ1Q86V15 1759 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 A0A0U1RQJ8 604 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 B4E1Z4 1266 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 IL2RBP14784 551 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 ATP2B1P20020 1258 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 MORC3Q14149 939 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 KIF4BQ2VIQ3 1234 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 CCDC102BQ68D86 513 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 TC2NQ8N9U0 490 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 ATRIPQ8WXE1 791 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 PPM1EQ8WY54 764 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 KIFC2Q96AC6 838 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 FAM204AQ9H8W3 233 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 FANCLQ9NW38 375 aa9.04□□□□□ -0.96
NKRF-201ENST00000304449 MMP1P03956 469 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 IFNAR1P17181 557 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 RXRAP19793 462 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 PTPREP23469 700 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 PHKA1P46020 1223 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 FMR1Q06787 632 aaKnown RBP eCLIP9.03□□□□□ -0.96
NKRF-201ENST00000304449 TTF1Q15361 905 aaPredicted RBP9.03□□□□□ -0.96
NKRF-201ENST00000304449 CADPS2Q86UW7 1296 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 RIN2Q8WYP3 895 aaPredicted RBP9.03□□□□□ -0.96
NKRF-201ENST00000304449 PIGBQ92521 554 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 BAG1Q99933 345 aaPredicted RBP9.03□□□□□ -0.96
NKRF-201ENST00000304449 YY1AP1Q9H869 796 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 ACTN4O43707 911 aaKnown RBP9.03□□□□□ -0.96
NKRF-201ENST00000304449 EIF3JO75822 258 aaKnown RBP9.03□□□□□ -0.96
NKRF-201ENST00000304449 TXLNAP40222 546 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 AKAP17AQ02040 695 aaKnown RBP9.03□□□□□ -0.96
NKRF-201ENST00000304449 TTC19Q6DKK2 380 aaPredicted RBP9.03□□□□□ -0.96
NKRF-201ENST00000304449 HDXQ7Z353 690 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 RALYLQ86SE5 291 aaKnown RBP9.03□□□□□ -0.96
NKRF-201ENST00000304449 ZNF579Q8NAF0 562 aaKnown RBP9.03□□□□□ -0.96
NKRF-201ENST00000304449 PNKPQ96T60 521 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 MAN1B1Q9UKM7 699 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 KCNH3Q9ULD8 1083 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 ASAP1Q9ULH1 1129 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 CACNA1SQ13698 1873 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 BCL9O00512 1426 aa9.03□□□□□ -0.96
NKRF-201ENST00000304449 GSG1L2A8MUP6 293 aa9.02□□□□□ -0.96
NKRF-201ENST00000304449 PATL2C9JE40 543 aaKnown RBP9.02□□□□□ -0.96
NKRF-201ENST00000304449 CPLX1O14810 134 aa9.02□□□□□ -0.96
NKRF-201ENST00000304449 CDKL5O76039 1030 aa9.02□□□□□ -0.96
NKRF-201ENST00000304449 DNAJC21Q5F1R6 531 aaKnown RBP9.02□□□□□ -0.96
NKRF-201ENST00000304449 NOSTRINQ8IVI9 506 aa9.02□□□□□ -0.96
NKRF-201ENST00000304449 DNAJC10Q8IXB1 793 aa9.02□□□□□ -0.96
NKRF-201ENST00000304449 RABGGTAQ92696 567 aa9.02□□□□□ -0.96
NKRF-201ENST00000304449 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.02□□□□□ -0.96
NKRF-201ENST00000304449 PBX1P40424 430 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms