RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 ARPP21Q9UBL0 812 aaPredicted RBP22.28■■□□□ 1.16
BRAF-201ENST00000288602 ZNF500O60304 480 aaPredicted RBP22.27■■□□□ 1.16
BRAF-201ENST00000288602 CMA1P23946 247 aa22.27■■□□□ 1.16
BRAF-201ENST00000288602 SPECC1Q5M775 1068 aa22.27■■□□□ 1.16
BRAF-201ENST00000288602 CD209Q9NNX6 404 aa22.27■■□□□ 1.16
BRAF-201ENST00000288602 V9GY48 417 aaPredicted RBP22.27■■□□□ 1.16
BRAF-201ENST00000288602 TSPY2A6NKD2 308 aa22.26■■□□□ 1.15
BRAF-201ENST00000288602 POLRMTO00411 1230 aaKnown RBP22.26■■□□□ 1.15
BRAF-201ENST00000288602 IQCB1Q15051 598 aa22.26■■□□□ 1.15
BRAF-201ENST00000288602 POLLQ9UGP5 575 aa22.26■■□□□ 1.15
BRAF-201ENST00000288602 MYH6P13533 1939 aa22.26■■□□□ 1.15
BRAF-201ENST00000288602 RCAN1P53805 252 aa22.26■■□□□ 1.15
BRAF-201ENST00000288602 PKN1Q16512 942 aa22.26■■□□□ 1.15
BRAF-201ENST00000288602 TGFBRAP1Q8WUH2 860 aa22.26■■□□□ 1.15
BRAF-201ENST00000288602 PIBF1Q8WXW3 757 aa22.26■■□□□ 1.15
BRAF-201ENST00000288602 TRIM5Q9C035 493 aa22.26■■□□□ 1.15
BRAF-201ENST00000288602 GGA1Q9UJY5 639 aa22.26■■□□□ 1.15
BRAF-201ENST00000288602 BIN1O00499 593 aa22.25■■□□□ 1.15
BRAF-201ENST00000288602 ORC4O43929 436 aa22.25■■□□□ 1.15
BRAF-201ENST00000288602 AKAP17AQ02040 695 aaKnown RBP22.25■■□□□ 1.15
BRAF-201ENST00000288602 FUT2Q10981 343 aa22.25■■□□□ 1.15
BRAF-201ENST00000288602 MAST2Q6P0Q8 1798 aa22.25■■□□□ 1.15
BRAF-201ENST00000288602 PPP6R2O75170 966 aa22.25■■□□□ 1.15
BRAF-201ENST00000288602 PCP11498 1178 aaKnown RBP22.25■■□□□ 1.15
BRAF-201ENST00000288602 PDE4BQ07343 736 aa22.25■■□□□ 1.15
BRAF-201ENST00000288602 C17orf53Q8N3J3 647 aaPredicted RBP22.25■■□□□ 1.15
BRAF-201ENST00000288602 RNF26Q9BY78 433 aaPredicted RBP22.25■■□□□ 1.15
BRAF-201ENST00000288602 MKRN1Q9UHC7 482 aaKnown RBP22.25■■□□□ 1.15
BRAF-201ENST00000288602 SBK1Q52WX2 424 aa22.24■■□□□ 1.15
BRAF-201ENST00000288602 KIAA1468Q9P260 1216 aa22.24■■□□□ 1.15
BRAF-201ENST00000288602 SAP30BPQ9UHR5 308 aaKnown RBP22.24■■□□□ 1.15
BRAF-201ENST00000288602 KIAA1551Q9HCM1 1747 aa22.24■■□□□ 1.15
BRAF-201ENST00000288602 FAM205CA6NFA0 338 aa22.24■■□□□ 1.15
BRAF-201ENST00000288602 SLC3A2P08195 630 aaKnown RBP22.24■■□□□ 1.15
BRAF-201ENST00000288602 GRIN1Q05586 938 aa22.24■■□□□ 1.15
BRAF-201ENST00000288602 ISM2Q6H9L7 571 aa22.24■■□□□ 1.15
BRAF-201ENST00000288602 MAPKAPK5Q8IW41 473 aa22.24■■□□□ 1.15
BRAF-201ENST00000288602 CABP5Q9NP86 173 aa22.24■■□□□ 1.15
BRAF-201ENST00000288602 PCDHB6Q9Y5E3 794 aa22.24■■□□□ 1.15
BRAF-201ENST00000288602 LAMB1P07942 1786 aa22.24■■□□□ 1.15
BRAF-201ENST00000288602 C12orf60Q5U649 245 aa22.23■■□□□ 1.15
BRAF-201ENST00000288602 ANO10Q9NW15 660 aa22.23■■□□□ 1.15
BRAF-201ENST00000288602 GOLGA6L19H0YKK7 550 aa22.23■■□□□ 1.15
BRAF-201ENST00000288602 C6orf229H3BNL8 230 aa22.23■■□□□ 1.15
BRAF-201ENST00000288602 SYKP43405 635 aa22.23■■□□□ 1.15
BRAF-201ENST00000288602 OLFM4Q6UX06 510 aa22.23■■□□□ 1.15
BRAF-201ENST00000288602 SLC44A5Q8NCS7 719 aa22.23■■□□□ 1.15
BRAF-201ENST00000288602 FOXP1Q9H334 677 aaPredicted RBP22.23■■□□□ 1.15
BRAF-201ENST00000288602 ATP2B4P23634 1241 aa22.22■■□□□ 1.15
BRAF-201ENST00000288602 TFAP4Q01664 338 aa22.22■■□□□ 1.15
BRAF-201ENST00000288602 ZNF827Q17R98 1081 aa22.22■■□□□ 1.15
BRAF-201ENST00000288602 DPCR1Q3MIW9 517 aa22.22■■□□□ 1.15
BRAF-201ENST00000288602 DHX40Q8IX18 779 aaKnown RBP22.22■■□□□ 1.15
BRAF-201ENST00000288602 SRBD1Q8N5C6 995 aaKnown RBP22.22■■□□□ 1.15
BRAF-201ENST00000288602 JMYQ8N9B5 988 aa22.22■■□□□ 1.15
BRAF-201ENST00000288602 TBC1D16Q8TBP0 767 aa22.22■■□□□ 1.15
BRAF-201ENST00000288602 PLCD1P51178 756 aa22.22■■□□□ 1.15
BRAF-201ENST00000288602 EARS2Q5JPH6 523 aaKnown RBP22.22■■□□□ 1.15
BRAF-201ENST00000288602 KCNF1Q9H3M0 494 aa22.22■■□□□ 1.15
BRAF-201ENST00000288602 NRBP1Q9UHY1 535 aa22.22■■□□□ 1.15
BRAF-201ENST00000288602 RIMBP2O15034 1052 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 BAG3O95817 575 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 ZNF75DP51815 510 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 RCSD1Q6JBY9 416 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 DRC7Q8IY82 874 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.21■■□□□ 1.15
BRAF-201ENST00000288602 IL17RBQ9NRM6 502 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 BECN2A8MW95 431 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 PRPF3O43395 683 aaKnown RBP22.21■■□□□ 1.15
BRAF-201ENST00000288602 BBOX1O75936 387 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 VEGFAP15692 232 aaPredicted RBP22.21■■□□□ 1.15
BRAF-201ENST00000288602 PPP2R5BQ15173 497 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 C15orf52Q6ZUT6 534 aaKnown RBP22.21■■□□□ 1.15
BRAF-201ENST00000288602 TMTC3Q6ZXV5 915 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 AOPEPQ8N6M6 819 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 RTFDC1Q9BY42 306 aaPredicted RBP22.21■■□□□ 1.15
BRAF-201ENST00000288602 MTMR7Q9Y216 660 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 HPSEQ9Y251 543 aa22.21■■□□□ 1.15
BRAF-201ENST00000288602 USP17L3A6NCW0 530 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 USP17L4A6NCW7 530 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 OFD1O75665 1012 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 DDAH1O94760 285 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 BTDP43251 543 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 GSTO1P78417 241 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 NOM1Q5C9Z4 860 aaKnown RBP22.2■■□□□ 1.14
BRAF-201ENST00000288602 MFSD14BQ5SR56 506 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 RESP18Q5W5W9 173 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 USP17L1Q7RTZ2 530 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 PLA2G4DQ86XP0 818 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 RBM28Q9NW13 759 aaKnown RBP22.2■■□□□ 1.14
BRAF-201ENST00000288602 DLEC1Q9Y238 1755 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 CAVIN2O95810 425 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 KIAA2012Q0VF49 1180 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 CTCFLQ8NI51 663 aaPredicted RBP22.2■■□□□ 1.14
BRAF-201ENST00000288602 NOL10Q9BSC4 688 aaKnown RBP22.2■■□□□ 1.14
BRAF-201ENST00000288602 MKNK2Q9HBH9 465 aa22.2■■□□□ 1.14
BRAF-201ENST00000288602 CALM1P0DP23 149 aa22.19■■□□□ 1.14
BRAF-201ENST00000288602 CALM2P0DP24 149 aa22.19■■□□□ 1.14
BRAF-201ENST00000288602 CALM3P0DP25 149 aa22.19■■□□□ 1.14
BRAF-201ENST00000288602 IL1R1P14778 569 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms