RNA–Protein interactions for RNA: ENST00000274963.12

FGD2-201, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD2, Length 3,046 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-201ENST00000274963 IQCA1Q86XH1 822 aa17.33■□□□□ 0.37
FGD2-201ENST00000274963 SHISA4Q96DD7 197 aa17.33■□□□□ 0.37
FGD2-201ENST00000274963 ANKIB1Q9P2G1 1089 aa17.33■□□□□ 0.37
FGD2-201ENST00000274963 HIBADHP31937 336 aaKnown RBP17.33■□□□□ 0.36
FGD2-201ENST00000274963 UBASH3AP57075 661 aa17.33■□□□□ 0.36
FGD2-201ENST00000274963 ZNF174Q15697 407 aa17.33■□□□□ 0.36
FGD2-201ENST00000274963 TMTC2Q8N394 836 aa17.33■□□□□ 0.36
FGD2-201ENST00000274963 COL14A1Q05707 1796 aaKnown RBP17.32■□□□□ 0.36
FGD2-201ENST00000274963 SMTNL1A8MU46 457 aa17.32■□□□□ 0.36
FGD2-201ENST00000274963 PTPN14Q15678 1187 aa17.32■□□□□ 0.36
FGD2-201ENST00000274963 CLEC4GQ6UXB4 293 aa17.32■□□□□ 0.36
FGD2-201ENST00000274963 EPSTI1Q96J88 318 aa17.32■□□□□ 0.36
FGD2-201ENST00000274963 CSRNP2Q9H175 543 aa17.32■□□□□ 0.36
FGD2-201ENST00000274963 WNT7AO00755 349 aa17.32■□□□□ 0.36
FGD2-201ENST00000274963 COBLO75128 1261 aa17.32■□□□□ 0.36
FGD2-201ENST00000274963 KLHL10Q6JEL2 608 aa17.32■□□□□ 0.36
FGD2-201ENST00000274963 ARMCX5Q6P1M9 558 aa17.32■□□□□ 0.36
FGD2-201ENST00000274963 DHX58Q96C10 678 aa17.32■□□□□ 0.36
FGD2-201ENST00000274963 COL1A1P02452 1464 aaPredicted RBP17.32■□□□□ 0.36
FGD2-201ENST00000274963 TMEM232C9JQI7 657 aa17.31■□□□□ 0.36
FGD2-201ENST00000274963 BMP6P22004 513 aa17.31■□□□□ 0.36
FGD2-201ENST00000274963 SFPQP23246 707 aaKnown RBP eCLIP17.31■□□□□ 0.36
FGD2-201ENST00000274963 SF3B3Q15393 1217 aaKnown RBP17.31■□□□□ 0.36
FGD2-201ENST00000274963 SEC23AQ15436 765 aa17.31■□□□□ 0.36
FGD2-201ENST00000274963 CDK11BP21127 795 aaKnown RBP17.31■□□□□ 0.36
FGD2-201ENST00000274963 CCDC112Q8NEF3 446 aa17.31■□□□□ 0.36
FGD2-201ENST00000274963 NSUN4Q96CB9 384 aaKnown RBP17.31■□□□□ 0.36
FGD2-201ENST00000274963 MCM9Q9NXL9 1143 aa17.31■□□□□ 0.36
FGD2-201ENST00000274963 USP17L8P0C7I0 530 aa17.31■□□□□ 0.36
FGD2-201ENST00000274963 RILPL1Q5EBL4 403 aa17.31■□□□□ 0.36
FGD2-201ENST00000274963 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
FGD2-201ENST00000274963 ZNF804BA4D1E1 1349 aa17.3■□□□□ 0.36
FGD2-201ENST00000274963 TSPY2A6NKD2 308 aa17.3■□□□□ 0.36
FGD2-201ENST00000274963 CREBRFQ8IUR6 639 aa17.3■□□□□ 0.36
FGD2-201ENST00000274963 FBXO2Q9UK22 296 aaPredicted RBP17.3■□□□□ 0.36
FGD2-201ENST00000274963 CCNL1Q9UK58 526 aaPredicted RBP17.3■□□□□ 0.36
FGD2-201ENST00000274963 MYL5Q02045 173 aa17.3■□□□□ 0.36
FGD2-201ENST00000274963 STK36Q9NRP7 1315 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 SPDYE4A6NLX3 237 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 STX17P56962 302 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 DIXDC1Q155Q3 683 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 TPTE2Q6XPS3 522 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 DZIP1Q86YF9 867 aaKnown RBP17.29■□□□□ 0.36
FGD2-201ENST00000274963 FAM177A1Q8N128 213 aaPredicted RBP17.29■□□□□ 0.36
FGD2-201ENST00000274963 DYNLL2Q96FJ2 89 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 HSD3B7Q9H2F3 369 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 FOXP1Q9H334 677 aaPredicted RBP17.29■□□□□ 0.36
FGD2-201ENST00000274963 POSTNQ15063 836 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 PKN1Q16512 942 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 DCP1AQ9NPI6 582 aaPredicted RBP17.29■□□□□ 0.36
FGD2-201ENST00000274963 TUBE1Q9UJT0 475 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 COL16A1Q07092 1604 aaPredicted RBP17.29■□□□□ 0.36
FGD2-201ENST00000274963 PTPREP23469 700 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 PPP4R3BQ5MIZ7 849 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 ARHGEF1Q92888 912 aaKnown RBP17.29■□□□□ 0.36
FGD2-201ENST00000274963 TIGD1Q96MW7 591 aa17.29■□□□□ 0.36
FGD2-201ENST00000274963 ANKRD36CQ5JPF3 1778 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 ADAMTS3O15072 1205 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 XBP1P17861 261 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 PDE4CQ08493 712 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 SMYD4Q8IYR2 804 aaPredicted RBP17.28■□□□□ 0.36
FGD2-201ENST00000274963 CCAR2Q8N163 923 aaKnown RBP17.28■□□□□ 0.36
FGD2-201ENST00000274963 TMX1Q9H3N1 280 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 RTCBQ9Y3I0 505 aaKnown RBP17.28■□□□□ 0.36
FGD2-201ENST00000274963 MYH15Q9Y2K3 1946 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 VWA3AA6NCI4 1184 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 CDC25AP30304 524 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 FMR1Q06787 632 aaKnown RBP eCLIP17.28■□□□□ 0.36
FGD2-201ENST00000274963 FBXO33Q7Z6M2 555 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 MAN1B1Q9UKM7 699 aa17.28■□□□□ 0.36
FGD2-201ENST00000274963 KRT2P35908 639 aa17.27■□□□□ 0.36
FGD2-201ENST00000274963 CBX1P83916 185 aa17.27■□□□□ 0.36
FGD2-201ENST00000274963 TROAPQ12815 778 aa17.27■□□□□ 0.36
FGD2-201ENST00000274963 NFIXQ14938 502 aa17.27■□□□□ 0.36
FGD2-201ENST00000274963 BARGINQ6ZT62 677 aa17.27■□□□□ 0.36
FGD2-201ENST00000274963 SRBD1Q8N5C6 995 aaKnown RBP17.27■□□□□ 0.36
FGD2-201ENST00000274963 CTCFLQ8NI51 663 aaPredicted RBP17.27■□□□□ 0.36
FGD2-201ENST00000274963 SMARCE1Q969G3 411 aa17.27■□□□□ 0.36
FGD2-201ENST00000274963 CRNKL1Q9BZJ0 848 aaKnown RBP17.27■□□□□ 0.36
FGD2-201ENST00000274963 NEMFO60524 1076 aa17.27■□□□□ 0.35
FGD2-201ENST00000274963 USP5P45974 858 aa17.27■□□□□ 0.35
FGD2-201ENST00000274963 GSDMDP57764 484 aa17.27■□□□□ 0.35
FGD2-201ENST00000274963 PIK3AP1Q6ZUJ8 805 aa17.27■□□□□ 0.35
FGD2-201ENST00000274963 HOMER1Q86YM7 354 aa17.27■□□□□ 0.35
FGD2-201ENST00000274963 SAP30BPQ9UHR5 308 aaKnown RBP17.27■□□□□ 0.35
FGD2-201ENST00000274963 C4AP0C0L4 1744 aa17.27■□□□□ 0.35
FGD2-201ENST00000274963 C4BP0C0L5 1744 aa17.27■□□□□ 0.35
FGD2-201ENST00000274963 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.35
FGD2-201ENST00000274963 NLRP5P59047 1200 aa17.26■□□□□ 0.35
FGD2-201ENST00000274963 GRIK5Q16478 980 aa17.26■□□□□ 0.35
FGD2-201ENST00000274963 BPIFA3Q9BQP9 254 aa17.26■□□□□ 0.35
FGD2-201ENST00000274963 RNF26Q9BY78 433 aaPredicted RBP17.26■□□□□ 0.35
FGD2-201ENST00000274963 NARFQ9UHQ1 456 aa17.26■□□□□ 0.35
FGD2-201ENST00000274963 PRDM4Q9UKN5 801 aa17.26■□□□□ 0.35
FGD2-201ENST00000274963 NFE2L3Q9Y4A8 694 aa17.26■□□□□ 0.35
FGD2-201ENST00000274963 A0A087X0B3 334 aa17.26■□□□□ 0.35
FGD2-201ENST00000274963 MCM7P33993 719 aa17.26■□□□□ 0.35
FGD2-201ENST00000274963 RFC4P35249 363 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms