RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 MCM2P49736 904 aa21.94■■□□□ 1.1
COL4A3BP-201ENST00000261415 EIF6P56537 245 aaKnown RBP21.94■■□□□ 1.1
COL4A3BP-201ENST00000261415 CFAP100Q494V2 611 aa21.94■■□□□ 1.1
COL4A3BP-201ENST00000261415 SBK1Q52WX2 424 aa21.94■■□□□ 1.1
COL4A3BP-201ENST00000261415 AKNAD1Q5T1N1 836 aa21.94■■□□□ 1.1
COL4A3BP-201ENST00000261415 NEDD4P46934 1319 aa21.94■■□□□ 1.1
COL4A3BP-201ENST00000261415 DHX32Q7L7V1 743 aaKnown RBP21.94■■□□□ 1.1
COL4A3BP-201ENST00000261415 OGFOD1Q8N543 542 aa21.94■■□□□ 1.1
COL4A3BP-201ENST00000261415 STAG1Q8WVM7 1258 aa21.94■■□□□ 1.1
COL4A3BP-201ENST00000261415 WDHD1O75717 1129 aaPredicted RBP21.93■■□□□ 1.1
COL4A3BP-201ENST00000261415 ADCY5O95622 1261 aa21.93■■□□□ 1.1
COL4A3BP-201ENST00000261415 TRDNQ13061 729 aa21.93■■□□□ 1.1
COL4A3BP-201ENST00000261415 RALYLQ86SE5 291 aaKnown RBP21.93■■□□□ 1.1
COL4A3BP-201ENST00000261415 MB21D2Q8IYB1 491 aaPredicted RBP21.93■■□□□ 1.1
COL4A3BP-201ENST00000261415 TACC3Q9Y6A5 838 aa21.93■■□□□ 1.1
COL4A3BP-201ENST00000261415 EVX2Q03828 476 aa21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 PKP1Q13835 747 aa21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 MFSD6Q6ZSS7 791 aa21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 NOL8Q76FK4 1167 aaKnown RBP21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 C17orf53Q8N3J3 647 aaPredicted RBP21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 INCENPQ9NQS7 918 aa21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 ZNF541Q9H0D2 1346 aa21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 CYP2D6P10635 497 aa21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 MAPK8IP2Q13387 824 aaPredicted RBP21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 STK11IPQ8N1F8 1099 aa21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 KIF18AQ8NI77 898 aa21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 SIPA1L1O43166 1804 aa21.92■■□□□ 1.1
COL4A3BP-201ENST00000261415 SLC4A8Q2Y0W8 1093 aa21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 ALDH8A1Q9H2A2 487 aaPredicted RBP21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 RNF41Q9H4P4 317 aaPredicted RBP21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 GEMIN8Q9NWZ8 242 aaKnown RBP21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 SAP30BPQ9UHR5 308 aaKnown RBP21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 B4E1Z4 1266 aa21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 RPS12P25398 132 aaKnown RBP21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 EXOSC10Q01780 885 aaKnown RBP21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 PICALMQ13492 652 aa21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 C12orf60Q5U649 245 aa21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 PRMT6Q96LA8 375 aaPredicted RBP21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 CNNM2Q9H8M5 875 aa21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 DDX4Q9NQI0 724 aaKnown RBP21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 USP25Q9UHP3 1055 aa21.91■■□□□ 1.1
COL4A3BP-201ENST00000261415 MMP14P50281 582 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 CHST3Q7LGC8 479 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 AMOTL1Q8IY63 956 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 NKX2-3Q8TAU0 364 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 ZDHHC9Q9Y397 364 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 ROBO3Q96MS0 1386 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 SPDYE2BA6NHP3 402 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 SPDYE6P0CI01 402 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 Q6ZUG5 572 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 LRRC2Q9BYS8 371 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 GJA3Q9Y6H8 435 aa21.9■■□□□ 1.1
COL4A3BP-201ENST00000261415 SMTNL1A8MU46 457 aa21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 TOB2Q14106 344 aaPredicted RBP21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 LARP6Q9BRS8 491 aaKnown RBP21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 KRT23Q9C075 422 aa21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 TDRD3Q9H7E2 651 aaKnown RBP21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 POLR3DP05423 398 aaPredicted RBP21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 ANTXR2P58335 489 aa21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 NFIAQ12857 509 aa21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 DLGAP5Q15398 846 aa21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 TMX3Q96JJ7 454 aa21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 TOMM22Q9NS69 142 aa21.89■■□□□ 1.09
COL4A3BP-201ENST00000261415 GOLGA6L6A8MZA4 724 aa21.88■■□□□ 1.09
COL4A3BP-201ENST00000261415 SLC3A2P08195 630 aaKnown RBP21.88■■□□□ 1.09
COL4A3BP-201ENST00000261415 PCP11498 1178 aaKnown RBP21.88■■□□□ 1.09
COL4A3BP-201ENST00000261415 GMPSP49915 693 aaPredicted RBP21.88■■□□□ 1.09
COL4A3BP-201ENST00000261415 CACNB3P54284 484 aa21.88■■□□□ 1.09
COL4A3BP-201ENST00000261415 ANKRD1Q15327 319 aa21.88■■□□□ 1.09
COL4A3BP-201ENST00000261415 RRP12Q5JTH9 1297 aaKnown RBP21.88■■□□□ 1.09
COL4A3BP-201ENST00000261415 RNF181Q9P0P0 153 aa21.88■■□□□ 1.09
COL4A3BP-201ENST00000261415 LIMCH1Q9UPQ0 1083 aa21.88■■□□□ 1.09
COL4A3BP-201ENST00000261415 WDR19Q8NEZ3 1342 aa21.88■■□□□ 1.09
COL4A3BP-201ENST00000261415 SHTN1A0MZ66 631 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 PRC1O43663 620 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 FGRP09769 529 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 PLCD1P51178 756 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 CYB5R4Q7L1T6 521 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 MTMR14Q8NCE2 650 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 IDI2Q9BXS1 227 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 KDM4AO75164 1064 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 GPR162Q16538 588 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 DPF2Q92785 391 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 AGXT2Q9BYV1 514 aa21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 OSBPL5Q9H0X9 879 aaPredicted RBP21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 FEZ2Q9UHY8 353 aaPredicted RBP21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.87■■□□□ 1.09
COL4A3BP-201ENST00000261415 ZNF280AP59817 542 aaPredicted RBP21.86■■□□□ 1.09
COL4A3BP-201ENST00000261415 MYOZ2Q9NPC6 264 aa21.86■■□□□ 1.09
COL4A3BP-201ENST00000261415 ZSWIM5Q9P217 1185 aa21.86■■□□□ 1.09
COL4A3BP-201ENST00000261415 FAM53CQ9NYF3 392 aa21.86■■□□□ 1.09
COL4A3BP-201ENST00000261415 PAXBP1Q9Y5B6 917 aa21.86■■□□□ 1.09
COL4A3BP-201ENST00000261415 PRDM1O75626 825 aa21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 PDE4BQ07343 736 aa21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 BRF1Q92994 677 aa21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 FAM198AQ9UFP1 575 aa21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 TPCN1Q9ULQ1 816 aa21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 ORC4O43929 436 aa21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 NPM3O75607 178 aaKnown RBP21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 TNNT3P45378 269 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms