RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 DPCR1Q3MIW9 517 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 DNTTIP2Q5QJE6 756 aaKnown RBP21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 SHC4Q6S5L8 630 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 AOPEPQ8N6M6 819 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 FANCBQ8NB91 859 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 ESR2Q92731 530 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 CRAMP1Q96RY5 1269 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 KIAA1468Q9P260 1216 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 BECN2A8MW95 431 aa21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 CRACR2BQ8N4Y2 399 aaPredicted RBP21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 KIAA1524Q8TCG1 905 aa21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 AATFQ9NY61 560 aaKnown RBP eCLIP21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 LEMD3Q9Y2U8 911 aa21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 NRXN2Q9P2S2 1712 aa21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 MMP1P03956 469 aa21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 GPSM2P81274 684 aa21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 CEP57L1Q8IYX8 460 aa21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 ENAHQ8N8S7 591 aaPredicted RBP21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 CLIP2Q9UDT6 1046 aa21.6■■□□□ 1.05
PDLIM4-201ENST00000253754 CCDC144BQ3MJ40 725 aa21.59■■□□□ 1.05
PDLIM4-201ENST00000253754 CTR9Q6PD62 1173 aa21.59■■□□□ 1.05
PDLIM4-201ENST00000253754 NOSTRINQ8IVI9 506 aa21.59■■□□□ 1.05
PDLIM4-201ENST00000253754 DIS3L2Q8IYB7 885 aaKnown RBP21.59■■□□□ 1.05
PDLIM4-201ENST00000253754 TRIM22Q8IYM9 498 aa21.59■■□□□ 1.05
PDLIM4-201ENST00000253754 GPR101Q96P66 508 aaPredicted RBP21.59■■□□□ 1.05
PDLIM4-201ENST00000253754 SPTLC3Q9NUV7 552 aa21.59■■□□□ 1.05
PDLIM4-201ENST00000253754 TPM3P06753 285 aa21.59■■□□□ 1.05
PDLIM4-201ENST00000253754 SRGNP10124 158 aa21.59■■□□□ 1.05
PDLIM4-201ENST00000253754 USP17L12C9JPN9 530 aa21.58■■□□□ 1.05
PDLIM4-201ENST00000253754 USP17L21D6R901 530 aa21.58■■□□□ 1.05
PDLIM4-201ENST00000253754 SLC3A2P08195 630 aaKnown RBP21.58■■□□□ 1.05
PDLIM4-201ENST00000253754 NR5A1Q13285 461 aa21.58■■□□□ 1.05
PDLIM4-201ENST00000253754 WASF1Q92558 559 aa21.58■■□□□ 1.05
PDLIM4-201ENST00000253754 ZSCAN10Q96SZ4 725 aaPredicted RBP21.58■■□□□ 1.05
PDLIM4-201ENST00000253754 BAZ2AQ9UIF9 1905 aaKnown RBP21.58■■□□□ 1.04
PDLIM4-201ENST00000253754 DUOX1Q9NRD9 1551 aa21.58■■□□□ 1.04
PDLIM4-201ENST00000253754 IRS2Q9Y4H2 1338 aa21.58■■□□□ 1.04
PDLIM4-201ENST00000253754 hCG_1642624A0A1W2PR95 340 aa21.58■■□□□ 1.04
PDLIM4-201ENST00000253754 PPP6R2O75170 966 aa21.58■■□□□ 1.04
PDLIM4-201ENST00000253754 PDE6BP35913 854 aa21.58■■□□□ 1.04
PDLIM4-201ENST00000253754 TOB1P50616 345 aaPredicted RBP21.58■■□□□ 1.04
PDLIM4-201ENST00000253754 ISM2Q6H9L7 571 aa21.58■■□□□ 1.04
PDLIM4-201ENST00000253754 TMTC2Q8N394 836 aa21.58■■□□□ 1.04
PDLIM4-201ENST00000253754 SHISA4Q96DD7 197 aa21.58■■□□□ 1.04
PDLIM4-201ENST00000253754 MYH13Q9UKX3 1938 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 SEMA3EO15041 775 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 SYKP43405 635 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 SLC4A8Q2Y0W8 1093 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 SARM1Q6SZW1 724 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 OXER1Q8TDS5 423 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 MTA3Q9BTC8 594 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 HPSEQ9Y251 543 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 UQCRHLA0A096LP55 91 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 UFL1O94874 794 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 DEXIO95424 95 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 UQCRHP07919 91 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 SPECC1Q5M775 1068 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 PKNOX2Q96KN3 472 aa21.57■■□□□ 1.04
PDLIM4-201ENST00000253754 CYP2D6P10635 497 aa21.56■■□□□ 1.04
PDLIM4-201ENST00000253754 CCDC196A0A1B0GTZ2 297 aa21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 PSDA5PKW4 1024 aaPredicted RBP21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 PPEF1O14829 653 aaPredicted RBP21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 NMT2O60551 498 aa21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 NPR1P16066 1061 aa21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 TERF1P54274 439 aa21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 JMYQ8N9B5 988 aa21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 GGA1Q9UJY5 639 aa21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 PLEKHA8P1O95397 391 aa21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 GRIN1Q05586 938 aa21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 SAFBQ15424 915 aaKnown RBP eCLIP21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 ZRSR1Q15695 479 aaKnown RBP21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 IFIT1BQ5T764 474 aaKnown RBP21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 RESP18Q5W5W9 173 aa21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 CCDC125Q86Z20 511 aa21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 NAT10Q9H0A0 1025 aaKnown RBP21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 DCP1AQ9NPI6 582 aaPredicted RBP21.55■■□□□ 1.04
PDLIM4-201ENST00000253754 ARID5BQ14865 1188 aa21.54■■□□□ 1.04
PDLIM4-201ENST00000253754 R3HDM1Q15032 1099 aaKnown RBP21.54■■□□□ 1.04
PDLIM4-201ENST00000253754 ATP2B1P20020 1258 aa21.54■■□□□ 1.04
PDLIM4-201ENST00000253754 ATP2B4P23634 1241 aa21.54■■□□□ 1.04
PDLIM4-201ENST00000253754 FAM47AQ5JRC9 791 aa21.54■■□□□ 1.04
PDLIM4-201ENST00000253754 CACTINQ8WUQ7 758 aaKnown RBP21.54■■□□□ 1.04
PDLIM4-201ENST00000253754 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.54■■□□□ 1.04
PDLIM4-201ENST00000253754 CDC25BP30305 580 aa21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 RCAN1P53805 252 aa21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 PNOCQ13519 176 aa21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 VPS54Q9P1Q0 977 aa21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 POLLQ9UGP5 575 aa21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 ALDH1B1P30837 517 aa21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 SP8Q8IXZ3 490 aa21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 ZNF622Q969S3 477 aaKnown RBP eCLIP21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 MASTLQ96GX5 879 aa21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 MRFAP1L1Q96HT8 127 aa21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 FOXP1Q9H334 677 aaPredicted RBP21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 PCDHB6Q9Y5E3 794 aa21.53■■□□□ 1.04
PDLIM4-201ENST00000253754 MYH2Q9UKX2 1941 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 FAM205CA6NFA0 338 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 C6orf229H3BNL8 230 aa21.52■■□□□ 1.04
PDLIM4-201ENST00000253754 FGRP09769 529 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms