RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 ERC2O15083 957 aa4.15□□□□□ -1.74
PHTF2-201ENST00000248550 UBTFL1P0CB47 393 aaPredicted RBP4.15□□□□□ -1.74
PHTF2-201ENST00000248550 ZAP70P43403 619 aa4.15□□□□□ -1.74
PHTF2-201ENST00000248550 MFSD14BQ5SR56 506 aa4.15□□□□□ -1.74
PHTF2-201ENST00000248550 KCNV1Q6PIU1 500 aa4.15□□□□□ -1.74
PHTF2-201ENST00000248550 PPFIBP1Q86W92 1011 aa4.15□□□□□ -1.74
PHTF2-201ENST00000248550 TEX11Q8IYF3 940 aa4.15□□□□□ -1.74
PHTF2-201ENST00000248550 GTF3C6Q969F1 213 aa4.15□□□□□ -1.74
PHTF2-201ENST00000248550 NECTIN4Q96NY8 510 aa4.15□□□□□ -1.74
PHTF2-201ENST00000248550 USP40Q9NVE5 1235 aa4.15□□□□□ -1.74
PHTF2-201ENST00000248550 C4BP0C0L5 1744 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 AOX1Q06278 1338 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 MYL3P08590 195 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 CPT1AP50416 773 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 GPSM2P81274 684 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 IFNL3Q8IZI9 196 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 RASSF8Q8NHQ8 419 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 U2AF1L4Q8WU68 220 aaKnown RBP4.15□□□□□ -1.75
PHTF2-201ENST00000248550 L3MBTL2Q969R5 705 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 RNF41Q9H4P4 317 aaPredicted RBP4.15□□□□□ -1.75
PHTF2-201ENST00000248550 SEC63Q9UGP8 760 aaKnown RBP4.15□□□□□ -1.75
PHTF2-201ENST00000248550 MRC1P22897 1456 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 ZMYND10O75800 440 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 YBX3P16989 372 aaKnown RBP eCLIP4.15□□□□□ -1.751e-6■■■■□ 21.3
PHTF2-201ENST00000248550 HDLBPQ00341 1268 aaKnown RBP4.15□□□□□ -1.75
PHTF2-201ENST00000248550 IKBKEQ14164 716 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 PLCB4Q15147 1175 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 ZNF827Q17R98 1081 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 SLC45A4Q5BKX6 768 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 PRR5LQ6MZQ0 368 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 ZSCAN1Q8NBB4 408 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 ARHGAP9Q9BRR9 750 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 BCO2Q9BYV7 579 aa4.15□□□□□ -1.75
PHTF2-201ENST00000248550 SPINK5Q9NQ38 1064 aaPredicted RBP4.15□□□□□ -1.75
PHTF2-201ENST00000248550 SKIP12755 728 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 TMPOP42166 694 aaKnown RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 MAGEA9P43362 315 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 RIPK4P57078 832 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 PICALMQ13492 652 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 HNRNPDQ14103 355 aaKnown RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 LIN9Q5TKA1 542 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 PLBD2Q8NHP8 589 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 RUFY2Q8WXA3 655 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 SLC9A7Q96T83 725 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 MMP19Q99542 508 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 LMAN2LQ9H0V9 348 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 GLT8D2Q9H1C3 349 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 MROH8Q9H579 483 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 NKRFO15226 690 aaKnown RBP eCLIP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 SGPL1O95470 568 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 HOXB7P09629 217 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 CASTP20810 708 aaKnown RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 PHKA1P46020 1223 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 ATN1P54259 1190 aaPredicted RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 CDC42EP1Q00587 391 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 CCDC15Q0P6D6 951 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 ZRSR1Q15695 479 aaKnown RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 ELF2Q15723 593 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 TAF1BQ53T94 588 aaPredicted RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 DZIP1LQ8IYY4 767 aaKnown RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 C7orf31Q8N865 590 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 PXYLP1Q8TE99 480 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 RSPH1Q8WYR4 309 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 APBA2Q99767 749 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 EMILIN2Q9BXX0 1053 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 INO80BQ9C086 356 aaPredicted RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 ZHX2Q9Y6X8 837 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 DDTLA6NHG4 134 aaPredicted RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 SLC15A5A6NIM6 579 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 USP17L12C9JPN9 530 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 USP17L21D6R901 530 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 TLL1O43897 1013 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 AKR1A1P14550 325 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 MTHFRP42898 656 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 KIZQ2M2Z5 673 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 NAA16Q6N069 864 aaPredicted RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 CKAP2LQ8IYA6 745 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 CLDND1Q9NY35 253 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 IPPQ9Y573 584 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 LTN1O94822 1766 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 UQCRHLA0A096LP55 91 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 ALDH1A2O94788 518 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 PRKAR2BP31323 418 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 EPS15P42566 896 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 PFKPQ01813 784 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 PTH1RQ03431 593 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 RNASELQ05823 741 aaKnown RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 ATAT1Q5SQI0 421 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 CC2D1AQ6P1N0 951 aaPredicted RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 RALYLQ86SE5 291 aaKnown RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 IFNL1Q8IU54 200 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 NELL2Q99435 816 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 SLC12A5Q9H2X9 1139 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 GPCPD1Q9NPB8 672 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 TFIP11Q9UBB9 837 aaKnown RBP4.14□□□□□ -1.75
PHTF2-201ENST00000248550 ASAP1Q9ULH1 1129 aa4.14□□□□□ -1.75
PHTF2-201ENST00000248550 NTRK1P04629 796 aa4.13□□□□□ -1.75
PHTF2-201ENST00000248550 SMAD3P84022 425 aaKnown RBP4.13□□□□□ -1.75
PHTF2-201ENST00000248550 GIT2Q14161 759 aa4.13□□□□□ -1.75
PHTF2-201ENST00000248550 SUZ12Q15022 739 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms