RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 OXER1Q8TDS5 423 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 SETDB2Q96T68 719 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 ANKRD2Q9GZV1 360 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 CEP131Q9UPN4 1083 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 PCDHB6Q9Y5E3 794 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 KLRK1P26718 216 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 MYL5Q02045 173 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 DHX8Q14562 1220 aaKnown RBP30.22■■■□□ 2.43
RTN2-201ENST00000245923 PKN1Q16512 942 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 CATIPQ7Z7H3 387 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 IQCA1Q86XH1 822 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 ZNF710Q8N1W2 664 aa30.22■■■□□ 2.43
RTN2-201ENST00000245923 CCDC88AQ3V6T2 1871 aa30.21■■■□□ 2.43
RTN2-201ENST00000245923 CTIFO43310 598 aaKnown RBP30.21■■■□□ 2.43
RTN2-201ENST00000245923 PRPF3O43395 683 aaKnown RBP30.21■■■□□ 2.43
RTN2-201ENST00000245923 AKAP17AQ02040 695 aaKnown RBP30.21■■■□□ 2.43
RTN2-201ENST00000245923 SMIM5Q71RC9 77 aa30.21■■■□□ 2.43
RTN2-201ENST00000245923 RBM28Q9NW13 759 aaKnown RBP30.21■■■□□ 2.43
RTN2-201ENST00000245923 HOOK1Q9UJC3 728 aaKnown RBP30.21■■■□□ 2.43
RTN2-201ENST00000245923 PAXBP1Q9Y5B6 917 aa30.21■■■□□ 2.43
RTN2-201ENST00000245923 PCDHA5Q9Y5H7 936 aa30.21■■■□□ 2.43
RTN2-201ENST00000245923 SRPRBQ9Y5M8 271 aaKnown RBP30.21■■■□□ 2.43
RTN2-201ENST00000245923 XBP1P17861 261 aa30.21■■■□□ 2.43
RTN2-201ENST00000245923 FANCCQ00597 558 aa30.21■■■□□ 2.43
RTN2-201ENST00000245923 MECOMQ03112 1051 aa30.21■■■□□ 2.43
RTN2-201ENST00000245923 VPS72Q15906 364 aa30.21■■■□□ 2.43
RTN2-201ENST00000245923 CCDC150Q8NCX0 1101 aa30.21■■■□□ 2.43
RTN2-201ENST00000245923 SHISA4Q96DD7 197 aa30.21■■■□□ 2.43
RTN2-201ENST00000245923 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.21■■■□□ 2.43
RTN2-201ENST00000245923 BTAF1O14981 1849 aa30.2■■■□□ 2.43
RTN2-201ENST00000245923 CALM1P0DP23 149 aa30.2■■■□□ 2.43
RTN2-201ENST00000245923 CALM2P0DP24 149 aa30.2■■■□□ 2.43
RTN2-201ENST00000245923 CALM3P0DP25 149 aa30.2■■■□□ 2.43
RTN2-201ENST00000245923 LMOD1P29536 600 aaPredicted RBP30.2■■■□□ 2.43
RTN2-201ENST00000245923 HIBADHP31937 336 aaKnown RBP30.2■■■□□ 2.43
RTN2-201ENST00000245923 GRIN1Q05586 938 aa30.2■■■□□ 2.43
RTN2-201ENST00000245923 TROAPQ12815 778 aa30.2■■■□□ 2.42
RTN2-201ENST00000245923 SPECC1Q5M775 1068 aa30.2■■■□□ 2.42
RTN2-201ENST00000245923 TMED8Q6PL24 325 aaPredicted RBP30.2■■■□□ 2.42
RTN2-201ENST00000245923 TMC6Q7Z403 805 aa30.2■■■□□ 2.42
RTN2-201ENST00000245923 NBPF5PQ86XG9 351 aaPredicted RBP30.2■■■□□ 2.42
RTN2-201ENST00000245923 SRP68Q9UHB9 627 aaKnown RBP30.2■■■□□ 2.42
RTN2-201ENST00000245923 USP17L12C9JPN9 530 aa30.19■■■□□ 2.42
RTN2-201ENST00000245923 USP17L21D6R901 530 aa30.19■■■□□ 2.42
RTN2-201ENST00000245923 ZBTB22O15209 634 aa30.19■■■□□ 2.42
RTN2-201ENST00000245923 MYO1BO43795 1136 aa30.19■■■□□ 2.42
RTN2-201ENST00000245923 OLFM4Q6UX06 510 aa30.19■■■□□ 2.42
RTN2-201ENST00000245923 NOL10Q9BSC4 688 aaKnown RBP30.19■■■□□ 2.42
RTN2-201ENST00000245923 PHF20Q9BVI0 1012 aa30.19■■■□□ 2.42
RTN2-201ENST00000245923 ORC4O43929 436 aa30.19■■■□□ 2.42
RTN2-201ENST00000245923 NYAP1Q6ZVC0 841 aa30.19■■■□□ 2.42
RTN2-201ENST00000245923 PTF1AQ7RTS3 328 aa30.19■■■□□ 2.42
RTN2-201ENST00000245923 CABP5Q9NP86 173 aa30.19■■■□□ 2.42
RTN2-201ENST00000245923 USP27XA6NNY8 438 aa30.18■■■□□ 2.42
RTN2-201ENST00000245923 DDAH1O94760 285 aa30.18■■■□□ 2.42
RTN2-201ENST00000245923 PRDM1O75626 825 aa30.17■■■□□ 2.42
RTN2-201ENST00000245923 NT5DC1Q5TFE4 455 aa30.17■■■□□ 2.42
RTN2-201ENST00000245923 CRNKL1Q9BZJ0 848 aaKnown RBP30.17■■■□□ 2.42
RTN2-201ENST00000245923 KIAA1551Q9HCM1 1747 aa30.17■■■□□ 2.42
RTN2-201ENST00000245923 ATP1A3P13637 1013 aa30.17■■■□□ 2.42
RTN2-201ENST00000245923 ARMCX5Q6P1M9 558 aa30.17■■■□□ 2.42
RTN2-201ENST00000245923 CCAR2Q8N163 923 aaKnown RBP30.17■■■□□ 2.42
RTN2-201ENST00000245923 ATP8A2Q9NTI2 1148 aa30.17■■■□□ 2.42
RTN2-201ENST00000245923 VPS54Q9P1Q0 977 aa30.17■■■□□ 2.42
RTN2-201ENST00000245923 FOXN1O15353 648 aa30.16■■■□□ 2.42
RTN2-201ENST00000245923 PLEKHA8P1O95397 391 aa30.16■■■□□ 2.42
RTN2-201ENST00000245923 POSTNQ15063 836 aa30.16■■■□□ 2.42
RTN2-201ENST00000245923 DCP1AQ9NPI6 582 aaPredicted RBP30.16■■■□□ 2.42
RTN2-201ENST00000245923 POLR2DO15514 142 aaKnown RBP30.16■■■□□ 2.42
RTN2-201ENST00000245923 ZPR1O75312 459 aa30.16■■■□□ 2.42
RTN2-201ENST00000245923 BMP6P22004 513 aa30.16■■■□□ 2.42
RTN2-201ENST00000245923 KRT2P35908 639 aa30.16■■■□□ 2.42
RTN2-201ENST00000245923 CEP135Q66GS9 1140 aa30.16■■■□□ 2.42
RTN2-201ENST00000245923 TPTE2Q6XPS3 522 aa30.16■■■□□ 2.42
RTN2-201ENST00000245923 TFCP2L1Q9NZI6 479 aa30.16■■■□□ 2.42
RTN2-201ENST00000245923 CBFA2T2O43439 604 aa30.15■■■□□ 2.42
RTN2-201ENST00000245923 TMTC3Q6ZXV5 915 aa30.15■■■□□ 2.42
RTN2-201ENST00000245923 AATFQ9NY61 560 aaKnown RBP eCLIP30.15■■■□□ 2.42
RTN2-201ENST00000245923 V9GY48 417 aaPredicted RBP30.15■■■□□ 2.42
RTN2-201ENST00000245923 NHSQ6T4R5 1651 aa30.14■■■□□ 2.42
RTN2-201ENST00000245923 TRIM75PA6NK02 468 aa30.14■■■□□ 2.42
RTN2-201ENST00000245923 KCNJ6P48051 423 aa30.14■■■□□ 2.42
RTN2-201ENST00000245923 SARSP49591 514 aaKnown RBP30.14■■■□□ 2.42
RTN2-201ENST00000245923 SBK1Q52WX2 424 aa30.14■■■□□ 2.42
RTN2-201ENST00000245923 SERTAD1Q9UHV2 236 aa30.14■■■□□ 2.42
RTN2-201ENST00000245923 MAN1B1Q9UKM7 699 aa30.14■■■□□ 2.42
RTN2-201ENST00000245923 IRS2Q9Y4H2 1338 aa30.14■■■□□ 2.41
RTN2-201ENST00000245923 GNPATO15228 680 aa30.13■■■□□ 2.41
RTN2-201ENST00000245923 SFPQP23246 707 aaKnown RBP eCLIP30.13■■■□□ 2.41
RTN2-201ENST00000245923 TM4SF1P30408 202 aa30.13■■■□□ 2.41
RTN2-201ENST00000245923 PTPN14Q15678 1187 aa30.13■■■□□ 2.41
RTN2-201ENST00000245923 KANK3Q6NY19 840 aa30.13■■■□□ 2.41
RTN2-201ENST00000245923 PRDX5P30044 214 aa30.13■■■□□ 2.41
RTN2-201ENST00000245923 PIP4K2BP78356 416 aa30.13■■■□□ 2.41
RTN2-201ENST00000245923 UBASH3AP57075 661 aa30.12■■■□□ 2.41
RTN2-201ENST00000245923 GLIPR1L2Q4G1C9 344 aa30.12■■■□□ 2.41
RTN2-201ENST00000245923 CSRNP2Q9H175 543 aa30.12■■■□□ 2.41
RTN2-201ENST00000245923 ARPP21Q9UBL0 812 aaPredicted RBP30.12■■■□□ 2.41
RTN2-201ENST00000245923 ACTN4O43707 911 aaKnown RBP30.12■■■□□ 2.41
RTN2-201ENST00000245923 ATP2B1P20020 1258 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms