RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 RPAP1Q9BWH6 1393 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP1-201ENST00000226225 SCN7AQ01118 1682 aa13.55□□□□□ -0.24
TNFAIP1-201ENST00000226225 PTPDC1A2A3K4 754 aa13.55□□□□□ -0.24
TNFAIP1-201ENST00000226225 TFAP4Q01664 338 aa13.55□□□□□ -0.24
TNFAIP1-201ENST00000226225 TPD52L1Q16890 204 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP1-201ENST00000226225 KIAA1524Q8TCG1 905 aa13.55□□□□□ -0.24
TNFAIP1-201ENST00000226225 ZBTB9Q96C00 473 aa13.55□□□□□ -0.24
TNFAIP1-201ENST00000226225 TAOK3Q9H2K8 898 aa13.55□□□□□ -0.24
TNFAIP1-201ENST00000226225 SENP2Q9HC62 589 aa13.55□□□□□ -0.24
TNFAIP1-201ENST00000226225 MB21D2Q8IYB1 491 aaPredicted RBP13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 GTF3C6Q969F1 213 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 ARPP21Q9UBL0 812 aaPredicted RBP13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 UBR3Q6ZT12 1888 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 A0A087WWV3 80 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 NMT2O60551 498 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 ALX1Q15699 326 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 OTUD7BQ6GQQ9 843 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 PHKBQ93100 1093 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 SCAF8Q9UPN6 1271 aaKnown RBP13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 GOLGA6L6A8MZA4 724 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 F13A1P00488 732 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 CRKP46108 304 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 ANTXR2P58335 489 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 EXOSC10Q01780 885 aaKnown RBP13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 SPON1Q9HCB6 807 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 TRMT1Q9NXH9 659 aaKnown RBP13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 PCDHAC2Q9Y5I4 1007 aa13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 DDX60Q8IY21 1712 aaKnown RBP13.54□□□□□ -0.24
TNFAIP1-201ENST00000226225 TNKSO95271 1327 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 TNNT1P13805 278 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 SLC26A6Q9BXS9 759 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 TDRD3Q9H7E2 651 aaKnown RBP13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 ATP6V1DQ9Y5K8 247 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 TCHHQ07283 1943 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 PLCD1P51178 756 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 TRIM29Q14134 588 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 UVSSAQ2YD98 709 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 CATIPQ7Z7H3 387 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 TMEM87BQ96K49 555 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 NBPF3Q9H094 633 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 HDAC9Q9UKV0 1011 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 SPEF2Q9C093 1822 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 hCG_1642624A0A1W2PR95 340 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 ATP2B1P20020 1258 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 ZNF287Q9HBT7 754 aa13.53□□□□□ -0.24
TNFAIP1-201ENST00000226225 FAM196BA6NMK8 535 aa13.52□□□□□ -0.24
TNFAIP1-201ENST00000226225 TCP10L2B9ZVM9 353 aa13.52□□□□□ -0.24
TNFAIP1-201ENST00000226225 HLA-DOAP06340 250 aa13.52□□□□□ -0.24
TNFAIP1-201ENST00000226225 CCDC192P0DO97 292 aa13.52□□□□□ -0.24
TNFAIP1-201ENST00000226225 STRIP1Q5VSL9 837 aa13.52□□□□□ -0.24
TNFAIP1-201ENST00000226225 C15orf52Q6ZUT6 534 aaKnown RBP13.52□□□□□ -0.24
TNFAIP1-201ENST00000226225 RREB1Q92766 1687 aa13.52□□□□□ -0.24
TNFAIP1-201ENST00000226225 C4AP0C0L4 1744 aa13.52□□□□□ -0.24
TNFAIP1-201ENST00000226225 LIG1P18858 919 aa13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 IARSP41252 1262 aaKnown RBP13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 UTP14CQ5TAP6 766 aaKnown RBP13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 NKX2-3Q8TAU0 364 aa13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 RTFDC1Q9BY42 306 aaPredicted RBP13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 DLGAP5Q15398 846 aa13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 TRIM22Q8IYM9 498 aa13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 GTPBP4Q9BZE4 634 aaKnown RBP13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 KAT14Q9H8E8 782 aa13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 BCORQ6W2J9 1755 aa13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 TNRC6CQ9HCJ0 1690 aaKnown RBP13.52□□□□□ -0.25
TNFAIP1-201ENST00000226225 TGFB2P61812 414 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 RTN1Q16799 776 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 ANO6Q4KMQ2 910 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 APOA5Q6Q788 366 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 STAG1Q8WVM7 1258 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 PSMD14O00487 310 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 PFKFB2O60825 505 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 NLGN2Q8NFZ4 835 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 CTCFLQ8NI51 663 aaPredicted RBP13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 ZSCAN10Q96SZ4 725 aaPredicted RBP13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 ARID5BQ14865 1188 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 CFAP100Q494V2 611 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 BICD2Q8TD16 824 aa13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 ZNF274Q96GC6 653 aaPredicted RBP13.51□□□□□ -0.25
TNFAIP1-201ENST00000226225 GPR75-ASB3A0A0A6YYF3 556 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 SH2B2O14492 632 aaPredicted RBP13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 NCBP1Q09161 790 aaKnown RBP13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 CDC37L1Q7L3B6 337 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 FILIP1Q7Z7B0 1213 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 TMTC2Q8N394 836 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 CCDC112Q8NEF3 446 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 GJB4Q9NTQ9 266 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 DACT1Q9NYF0 836 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 ZNF831Q5JPB2 1677 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 CDKL5O76039 1030 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 SLURP2P0DP57 97 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 CDK11BP21127 795 aaKnown RBP13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 NFIAQ12857 509 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 TNMDQ9H2S6 317 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 VAT1LQ9HCJ6 419 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 FAM205AQ6ZU69 1335 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 SALL1Q9NSC2 1324 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms