RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 NKIRAS1Q9NYS0 192 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 APOA4P06727 396 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 FLIIQ13045 1269 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 JPH2Q9BR39 696 aaPredicted RBP3.81□□□□□ -1.8
NEB-201ENST00000172853 PAGR1Q9BTK6 254 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 STN1Q9H668 368 aaKnown RBP3.81□□□□□ -1.8
NEB-201ENST00000172853 ZFYVE1Q9HBF4 777 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 CSPG5O95196 566 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 MEI1Q5TIA1 1274 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 PRAM1Q96QH2 718 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 SLC4A4Q9Y6R1 1079 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 TDRD9Q8NDG6 1382 aaKnown RBP3.81□□□□□ -1.8
NEB-201ENST00000172853 FAM47E-STBD1D6RA91 191 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 TRAF5O00463 557 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 TTC4O95801 387 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 CIITAP33076 1130 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 GCKP35557 465 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 RAP1GDS1P52306 607 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 BLVRAP53004 296 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 MAP3K21Q5TCX8 1036 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 RABGGTAQ92696 567 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 TCF3P15923 654 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 RARSP54136 660 aaKnown RBP3.81□□□□□ -1.8
NEB-201ENST00000172853 SPAG1Q07617 926 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 JADE1Q6IE81 842 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 DCUN1D2Q6PH85 259 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.81□□□□□ -1.8
NEB-201ENST00000172853 GDAP1Q8TB36 358 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 ZSCAN18Q8TBC5 510 aaPredicted RBP3.81□□□□□ -1.8
NEB-201ENST00000172853 TMCC1O94876 653 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 SNX30Q5VWJ9 437 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 THEM5Q8N1Q8 247 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 METTL13Q8N6R0 699 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 POLIQ9UNA4 740 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 ORC6Q9Y5N6 252 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 KRT87PA6NCN2 255 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 KRT81Q14533 505 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 LRRC23Q53EV4 343 aaPredicted RBP3.81□□□□□ -1.8
NEB-201ENST00000172853 BOLA2Q9H3K6 86 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 AKNAQ7Z591 1439 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 GNAT1P11488 350 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 SUPT20HL1Q3ZLR7 823 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 CENPSQ8N2Z9 138 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 URGCPQ8TCY9 931 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 CHURC1Q8WUH1 139 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 CNPY2Q9Y2B0 182 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 METAP2P50579 478 aaKnown RBP eCLIP3.81□□□□□ -1.8
NEB-201ENST00000172853 ATXN3P54252 364 aaPredicted RBP3.81□□□□□ -1.8
NEB-201ENST00000172853 COG7P83436 770 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 NBPF11Q86T75 865 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 SLC26A6Q9BXS9 759 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 IFT122Q9HBG6 1241 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 PHKG1Q16816 387 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 RRAGBQ5VZM2 374 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 NPY2RP49146 381 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 SKOR1P84550 965 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 GPATCH4Q5T3I0 446 aaKnown RBP3.81□□□□□ -1.8
NEB-201ENST00000172853 CHST3Q7LGC8 479 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 ARL8AQ96BM9 186 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 IWS1Q96ST2 819 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 MAP3K15Q6ZN16 1313 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 ANKRD30BQ9BXX2 1392 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 WDR97A6NE52 1622 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 SMIM24O75264 130 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 GSDMDP57764 484 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 ARFGAP2Q8N6H7 521 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 SKA1Q96BD8 255 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 COA7Q96BR5 231 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 SCAND2PQ9GZW5 306 aaPredicted RBP3.81□□□□□ -1.8
NEB-201ENST00000172853 PALMDQ9NP74 551 aa3.81□□□□□ -1.8
NEB-201ENST00000172853 CCDC102BQ68D86 513 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ABHD8Q96I13 439 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 GSDMAQ96QA5 445 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 LRRC37BQ96QE4 947 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 DONSONQ9NYP3 566 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 NAIPQ13075 1403 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 WDR7Q9Y4E6 1490 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 KRT7P08729 469 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 KPNA2P52292 529 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 PHEXP78562 749 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ZNF174Q15697 407 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 ZC3H12BQ5HYM0 836 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 NCAPG2Q86XI2 1143 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 CCDC26Q8TAB7 109 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 GDPD2Q9HCC8 539 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 NEMP1O14524 444 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 URI1O94763 535 aaPredicted RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 TMCO5AQ8N6Q1 288 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 POMGNT1Q8WZA1 660 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 PHF8Q9UPP1 1060 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 I3L4J1 428 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 MAFGO15525 162 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 NAA25Q14CX7 972 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 CROCCP2Q86T23 111 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 TRIM55Q9BYV6 548 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 TNIKQ9UKE5 1360 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 AK2P54819 239 aa3.8□□□□□ -1.8
NEB-201ENST00000172853 DDX50Q9BQ39 737 aaKnown RBP3.8□□□□□ -1.8
NEB-201ENST00000172853 HESX1Q9UBX0 185 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms