RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Hic2Q9JLZ6 619 aaKnown RBP12.86□□□□□ -0.35
Lig1-211ENSMUST00000177588 Foxo4Q9WVH3 505 aa12.86□□□□□ -0.35
Lig1-211ENSMUST00000177588 Prr29B1ARI9 187 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Plekhf1Q3TB82 279 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Ica1lQ3TY65 431 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Ccdc174Q3U155 467 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Ttll12Q3UDE2 639 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Fchsd1Q6PFY1 688 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Sptlc3Q8BG54 563 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Ppfibp1Q8C8U0 969 aaKnown RBP12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Sugp2Q8CH09 1067 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Wasf1Q8R5H6 559 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Riok1Q922Q2 567 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Prc1Q99K43 603 aaKnown RBP12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Ift88Q61371 824 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Atp1a2Q6PIE5 1020 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Afg3l2Q8JZQ2 802 aaKnown RBP12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Etnk1Q9D4V0 363 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 PdclQ9DBX2 301 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Suclg2Q9Z2I8 433 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 PnnO35691 725 aaKnown RBP12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Sox5P35710 763 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Traf1P39428 409 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Pbx1P41778 430 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Rad23aP54726 363 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Glis3Q6XP49 780 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Cdc23Q8BGZ4 597 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Clic6Q8BHB9 596 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Krt23Q99PS0 422 aa12.85□□□□□ -0.35
Lig1-211ENSMUST00000177588 Exoc3l2D3YUP5 789 aa12.84□□□□□ -0.35
Lig1-211ENSMUST00000177588 Lrrc43Q3V0L5 667 aa12.84□□□□□ -0.35
Lig1-211ENSMUST00000177588 Zc3h12cQ5DTV4 884 aa12.84□□□□□ -0.35
Lig1-211ENSMUST00000177588 Fam170aQ66LM6 333 aa12.84□□□□□ -0.35
Lig1-211ENSMUST00000177588 Slc44a1Q6X893 653 aa12.84□□□□□ -0.35
Lig1-211ENSMUST00000177588 Csrnp2Q8BGQ2 534 aa12.84□□□□□ -0.35
Lig1-211ENSMUST00000177588 Ces1dQ8VCT4 565 aa12.84□□□□□ -0.35
Lig1-211ENSMUST00000177588 Vps16Q920Q4 839 aa12.84□□□□□ -0.35
Lig1-211ENSMUST00000177588 Tpm3-rs7D3Z2H9 248 aa12.83□□□□□ -0.35
Lig1-211ENSMUST00000177588 Sept1P42209 366 aa12.83□□□□□ -0.35
Lig1-211ENSMUST00000177588 Znhit6Q3UFB2 460 aaKnown RBP12.83□□□□□ -0.35
Lig1-211ENSMUST00000177588 Ccdc57Q6PHN1 1016 aa12.83□□□□□ -0.35
Lig1-211ENSMUST00000177588 Slc20a2Q80UP8 656 aa12.83□□□□□ -0.35
Lig1-211ENSMUST00000177588 Hps6Q8BLY7 805 aa12.83□□□□□ -0.35
Lig1-211ENSMUST00000177588 Lmod1Q8BVA4 595 aa12.83□□□□□ -0.35
Lig1-211ENSMUST00000177588 Rtn1Q8K0T0 780 aa12.83□□□□□ -0.35
Lig1-211ENSMUST00000177588 Taf6lQ8R2K4 616 aa12.83□□□□□ -0.35
Lig1-211ENSMUST00000177588 Cnpy3Q9DAU1 276 aa12.83□□□□□ -0.35
Lig1-211ENSMUST00000177588 Arhgap33Q80YF9 1305 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Il7P10168 154 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Usp5P56399 858 aaKnown RBP12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Atp1b3P97370 278 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 VeztQ3ZK22 780 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Map3k11Q80XI6 850 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Hgh1Q8C3I8 393 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Epc1Q8C9X6 813 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Eif2ak3Q9Z2B5 1114 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Cul4bA2A432 970 aaKnown RBP12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Pde11aP0C1Q2 933 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Mrps31Q61733 384 aaKnown RBP12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Igsf3Q6ZQA6 1194 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Q8C1R3 189 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 Vps53Q8CCB4 832 aa12.83□□□□□ -0.36
Lig1-211ENSMUST00000177588 NapbP28663 298 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Psmb7P70195 277 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Snai1Q02085 264 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Pla2g4fQ50L41 855 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Cypt2Q6P924 180 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Sval3Q76I99 144 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Smc2Q8CG48 1191 aaKnown RBP12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Paf1Q8K2T8 535 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Tab2Q99K90 693 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Mfap3lQ9D3X9 409 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Stk39Q9Z1W9 556 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Setdb1O88974 1307 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Hpcal4Q8BGZ1 191 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Pcdha7Q91Y13 937 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Rrp1bQ91YK2 724 aaKnown RBP12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Uap1Q91YN5 522 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Iqca1Q9CUL5 857 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Tube1Q9D6T1 475 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 SelenooQ9DBC0 667 aa12.82□□□□□ -0.36
Lig1-211ENSMUST00000177588 Stox1B2RQL2 990 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 CtcfQ61164 736 aaKnown RBP12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Adck2Q6NSR3 617 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Fhod1Q6P9Q4 1197 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Tcp11l2Q8K1H7 517 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Gdap1l1Q8VE33 370 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Ankrd31A0A140LI88 1765 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Pde8bE9Q4S1 865 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 CltaO08585 235 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Fam89aQ14BJ1 175 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 ItpripQ3TNL8 555 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Cnnm2Q3TWN3 875 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Snd1Q78PY7 910 aaKnown RBP12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Nek5Q7TSC3 627 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Cep128Q8BI22 1102 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 SowahdQ8BY98 327 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Rasal3Q8C2K5 1041 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Rbm43Q99J64 343 aa12.81□□□□□ -0.36
Lig1-211ENSMUST00000177588 Thap2Q9D305 217 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms