RNA–Protein interactions for RNA: ENSMUST00000138559.8

Ube4a-204, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 3,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-204ENSMUST00000138559 Kdm4cQ8VCD7 1054 aa8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 Rufy3Q9D394 469 aa8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 Chmp4cQ9D7F7 232 aa8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 SmapQ9R0P4 181 aaKnown RBP8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 Usp53P15975 1069 aa8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 Ttll12Q3UDE2 639 aa8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 Stxbp2Q64324 593 aa8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 Tmem130Q6NXM3 419 aa8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 Epc2Q8C0I4 808 aa8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 Pus7lQ8CE46 702 aa8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 Telo2Q9DC40 840 aaKnown RBP8.78□□□□□ -1
Ube4a-204ENSMUST00000138559 Nmt2O70311 529 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Mtx1P47802 317 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Rc3h1Q4VGL6 1130 aaKnown RBP8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Mrpl50Q8VDT9 159 aaKnown RBP8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Stx8O88983 236 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Usp5P56399 858 aaKnown RBP8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 WaplQ65Z40 1200 aaKnown RBP8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Pip5kl1Q6U7H8 395 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Tacc1Q6Y685 774 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 VmacQ8BP01 174 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Tjap1Q9DCD5 539 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Acot3Q9QYR7 432 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Klrc1Q9Z202 244 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 XdhQ00519 1335 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Atp8b3Q6UQ17 1335 aa8.77□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Pagr1bF6V0H0 108 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 MycnP03966 462 aaKnown RBP8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Mmp20P57748 482 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Sec23aQ01405 765 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Glra4Q61603 456 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Ddx19aQ61655 478 aaKnown RBP8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Fsd1Q7TPM6 496 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Iffo2Q8R2V2 512 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Tut1Q8R3F9 869 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Pagr1aQ99L02 253 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Traf3ip1Q149C2 625 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Senp6Q6P7W0 1132 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 DymQ8CHY3 669 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Ttll1Q91V51 423 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Trex1Q91XB0 314 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 TicrrQ8BQ33 1889 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Vwa3bJ9JI28 736 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Myl3P09542 204 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Stat1P42225 749 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Scg2Q03517 617 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Slc10a4Q3UEZ8 437 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Brip1Q5SXJ3 1174 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 LrmpQ60664 539 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Mtmr4Q91XS1 1190 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Trmt112Q9DCG9 125 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Suclg2Q9Z2I8 433 aa8.76□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Metap2O08663 478 aaKnown RBP8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Calm1P0DP26 149 aaKnown RBP8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Calm2P0DP27 149 aaKnown RBP8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Calm3P0DP28 149 aaKnown RBP8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Sept2P42208 361 aaKnown RBP8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Syt1P46096 421 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Znf697Q569E7 569 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Scfd2Q8BTY8 684 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 OplahQ8K010 1288 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Rufy2Q8R4C2 606 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Prkg1P0C605 671 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Alppl2P24823 529 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Ptpn12P35831 775 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Tmtc2Q56A06 836 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Krt74Q6IFZ9 495 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Senp5Q6NXL6 749 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Ireb2Q811J3 963 aaKnown RBP8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Arhgef6Q8K4I3 771 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Ces1hD3Z298 562 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Vmn2r23E9PXI5 849 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 ChgaP26339 463 aaKnown RBP8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Irx3P81067 507 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Cplx2P84086 134 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Zfp953Q3UPV7 304 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Ube2oQ6ZPJ3 1288 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Pknox2Q8BG99 474 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Scfd1Q8BRF7 639 aaKnown RBP8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Tpcn2Q8BWC0 731 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Ipo9Q91YE6 1041 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Cnpy3Q9DAU1 276 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Tmem47Q9JJG6 181 aa8.75□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Usp31E9Q6Y8 1344 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Cyp26a1O55127 497 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Rfx1P48377 963 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Cct2P80314 535 aaKnown RBP8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Usp50Q6P8X6 390 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Tmem59lQ7TNI2 337 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Phf20l1Q8CCJ9 1013 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Inpp5bQ8K337 993 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 PdgfdQ925I7 370 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 BccipQ9CWI3 316 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Rcan1Q9JHG6 198 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Frmpd4A2AFR3 1320 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Cep63Q3UPP8 700 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Bola3Q8CEI1 110 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 Eid1Q9DCR4 169 aa8.74□□□□□ -1.01
Ube4a-204ENSMUST00000138559 A430078G23RikE9Q7Y4 484 aa8.73□□□□□ -1.01
Ube4a-204ENSMUST00000138559 PgfP49764 158 aa8.73□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 368.5 ms