RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gm7903A2AWL1 463 aa29.72■■■□□ 2.35
Tpm1-216ENSMUST00000113707 AV320801A2AWL3 467 aa29.72■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Gm15023L7MUB4 467 aa29.72■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Snw1Q9CSN1 536 aaKnown RBP29.72■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Ecm29Q6PDI5 1840 aa29.72■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Psme4Q5SSW2 1843 aa29.71■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Cfap73J3QPZ5 306 aa29.71■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Eef2P58252 858 aaKnown RBP29.71■■■□□ 2.35
Tpm1-216ENSMUST00000113707 MyrflQ3UN70 904 aa29.71■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Trmt2aQ8BNV1 574 aaKnown RBP29.71■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Rc3h1Q4VGL6 1130 aaKnown RBP29.7■■■□□ 2.35
Tpm1-216ENSMUST00000113707 CrkQ64010 304 aa29.7■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Ccp110Q7TSH4 1004 aa29.7■■■□□ 2.35
Tpm1-216ENSMUST00000113707 IqcgQ80W32 419 aa29.7■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Phf14Q9D4H9 881 aa29.7■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Add3Q9QYB5 706 aaKnown RBP29.7■■■□□ 2.35
Tpm1-216ENSMUST00000113707 Zscan18E9PUD6 809 aa29.7■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Map3k12Q60700 888 aa29.7■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Gpr101Q80T62 511 aa29.7■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Chd1lQ9CXF7 900 aa29.7■■■□□ 2.34
Tpm1-216ENSMUST00000113707 GnaqP21279 359 aa29.69■■■□□ 2.34
Tpm1-216ENSMUST00000113707 E4f1Q8CCE9 783 aa29.69■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Tfcp2Q9ERA0 502 aa29.69■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Tmem47Q9JJG6 181 aa29.69■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Gm43638A0A0J9YU36 694 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 A0A1W2P6Q8 802 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Gm9048A0A1W2P7H4 802 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 A0A1W2P7Z8 802 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Gm9046A0A1W2P855 802 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Nap1l2P51860 460 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Tyro3P55144 880 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Fam89aQ14BJ1 175 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Tspyl4Q8VD63 406 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Etnk1Q9D4V0 363 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 RabggtaQ9JHK4 567 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Rcan3Q9JKK0 239 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Ptf1aQ9QX98 324 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Rrp1P56183 494 aaKnown RBP29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Usp25P57080 1055 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Kmt5bQ3U8K7 883 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 SpidrQ8BGX7 933 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Hook1Q8BIL5 728 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Ttc27Q8CD92 847 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Gpaa1Q9WTK3 621 aa29.68■■■□□ 2.34
Tpm1-216ENSMUST00000113707 CebpaP53566 359 aa29.67■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Lamc2Q61092 1191 aa29.67■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Snx13Q6PHS6 957 aa29.67■■■□□ 2.34
Tpm1-216ENSMUST00000113707 OplahQ8K010 1288 aa29.67■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Ubxn4Q8VCH8 506 aa29.67■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Klhl34A2AI76 644 aa29.66■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Myo1bP46735 1107 aa29.66■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Klhdc9Q3USL1 350 aa29.66■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Acot9Q9R0X4 439 aaKnown RBP29.66■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Kansl3A2RSY1 903 aaKnown RBP29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Olfml1Q8BSH2 233 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Glrx3Q9CQM9 337 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Lonrf3Q9D4H7 753 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Trpc5Q9QX29 975 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Igsf9bE9PZ19 1328 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Pfkfb3A7UAK5 555 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Usp5P56399 858 aaKnown RBP29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Spata18Q0P557 537 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Ccdc162pQ0VG85 912 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 MycbpapQ5SUV2 932 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 RadxQ8C779 850 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Trim11Q99PQ2 467 aa29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Akap8Q9DBR0 687 aaKnown RBP29.65■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Arid4aF8VPQ2 1261 aaKnown RBP29.64■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Tcp11l1Q8BTG3 509 aa29.64■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Hnrnpul1Q8VDM6 859 aaKnown RBP29.64■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Hps3Q91VB4 1002 aa29.64■■■□□ 2.34
Tpm1-216ENSMUST00000113707 Col5a2Q3U962 1497 aa29.64■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Stag2O35638 1231 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Clec11aO88200 328 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Vcam1P29533 739 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 CbarpQ66L44 698 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Tacc1Q6Y685 774 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Cd248Q91V98 765 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Sept14Q9DA97 430 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Zswim8Q3UHH1 1832 aaKnown RBP29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Irx3P81067 507 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Cyp4x1Q6A152 507 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Lzts2Q91YU6 671 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Mei1Q9D4I2 1268 aa29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Utp3Q9JI13 469 aaKnown RBP29.63■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Ktn1Q61595 1327 aaKnown RBP29.62■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Fdx1P46656 188 aa29.62■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Scnn1aQ61180 699 aa29.62■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Pcdhb14Q6PB90 796 aa29.62■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Smc2Q8CG48 1191 aaKnown RBP29.62■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Trim44Q9QXA7 346 aa29.62■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Alppl2P24823 529 aa29.61■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Cyp2c67Q569X9 491 aa29.61■■■□□ 2.33
Tpm1-216ENSMUST00000113707 KhnynQ80U38 671 aa29.61■■■□□ 2.33
Tpm1-216ENSMUST00000113707 AllcQ9JHX6 414 aa29.61■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Polr3gQ6NXY9 223 aa29.61■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Pcdhb15Q91Y04 786 aa29.61■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Trmt112Q9DCG9 125 aa29.61■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Klrc1Q9Z202 244 aa29.61■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Tpd52l1O54818 204 aa29.59■■■□□ 2.33
Retrieved 100 of 22,080 RNA–protein pairs in 104 ms