RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Ubac1Q8VDI7 409 aa9.44□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Krt79Q8VED5 531 aa9.44□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Mfap3Q922T2 349 aa9.44□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Tgs1Q923W1 853 aa9.44□□□□□ -0.9
Bdnf-210ENSMUST00000111051 LpxnQ99N69 386 aa9.44□□□□□ -0.9
Bdnf-210ENSMUST00000111051 NsmfQ99NF2 532 aa9.44□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Rcan1Q9JHG6 198 aa9.44□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Tacc2Q9JJG0 1149 aa9.44□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Vstm4T1NXB5 319 aa9.44□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Bin2D3Z6Q9 489 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Nbr1P97432 988 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Adam1aQ60813 791 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Csrnp2Q8BGQ2 534 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 NelfbQ8C4Y3 580 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Tada3Q8R0L9 432 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Nap1l5Q9JJF0 156 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Magi2Q9WVQ1 1275 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Rims2Q9EQZ7 1530 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Cyp3a59D3Z2W7 503 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Adssl1P28650 457 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Capza3P70190 299 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Ano9P86044 747 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Cyp24a1Q64441 514 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Gimap8Q75N62 688 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Sval3Q76I99 144 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Clec16aQ80U30 1036 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Cdan1Q8CC12 1239 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Pcdha12Q91Y18 950 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Six6os1Q9CTN5 574 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Nwd1A6H603 1563 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Tns3Q5SSZ5 1440 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Mdh1P14152 334 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Plcb3P51432 1234 aaKnown RBP9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Kiaa1468Q148V7 1216 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Hdhd2Q3UGR5 259 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Spg7Q3ULF4 781 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Q8CEZ4 452 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Spats2Q8K1N4 545 aaKnown RBP9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Mylk2Q8VCR8 613 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 PpanQ91YU8 470 aaKnown RBP9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Sar1bQ9CQC9 198 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Txnrd1Q9JMH6 613 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Stk39Q9Z1W9 556 aa9.43□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Gm4340L7N2C4 268 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Pde11aP0C1Q2 933 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Evi5P97366 809 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Slc7a1Q09143 622 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Tsr1Q5SWD9 803 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Nab2Q61127 525 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 RgmbQ7TQ33 436 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Lrsam1Q80ZI6 727 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Bcl11bQ99PV8 884 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Ribc1Q9D0B8 379 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Zc3h13E9Q784 1729 aaKnown RBP9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Akap2O54931 893 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Cd3dP04235 173 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Sox5P35710 763 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Dnm2P39054 870 aaKnown RBP9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Asic3Q6X1Y6 530 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Hps6Q8BLY7 805 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Fam102bQ8BQS4 339 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Ctage5Q8R311 779 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Klc3Q91W40 508 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Pdia6Q922R8 440 aaKnown RBP9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Emilin1Q99K41 1017 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 PdiltQ9DAN1 588 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 FliiQ9JJ28 1271 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Large1Q9Z1M7 756 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Suclg2Q9Z2I8 433 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Bicdl1A0JNT9 577 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Psen1P49769 467 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Mmp14P53690 582 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 GscQ02591 256 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Gas8Q60779 478 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Acap3Q6NXL5 833 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Tekt3Q6X6Z7 490 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Hirip3Q8BLH7 601 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Alx1Q8C8B0 326 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Cgref1Q8R1U2 281 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 IncenpQ9WU62 880 aa9.42□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Acad12D3Z7X0 555 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 AK157302I3ITR1 129 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Atp8b1Q148W0 1251 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Tspyl4Q8VD63 406 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Ubxn1Q922Y1 297 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 MbipQ99LQ1 341 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 RarsQ9D0I9 660 aaKnown RBP9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Isca1Q9D924 129 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Cnpy3Q9DAU1 276 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 RabggtaQ9JHK4 567 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Nek3Q9R0A5 511 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Irs4Q9Z0Y7 1216 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Slit2Q9R1B9 1521 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Mdc1Q5PSV9 1707 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Esco1Q69Z69 843 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Haus7Q8BKT8 364 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Kif2bQ8C0N1 668 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Clca2Q8BG22 942 aa9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Pwp2Q8BU03 919 aaKnown RBP9.41□□□□□ -0.9
Bdnf-210ENSMUST00000111051 Eaf2Q91ZD6 262 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms