RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Ercc6lQ8BHK9 1240 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Caps2Q8BUG5 550 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Ccdc12Q8R344 166 aaKnown RBP13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 SelenooQ9DBC0 667 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Pet2A2AHY8 747 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Sec23aQ01405 765 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Nab2Q61127 525 aa13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Zranb2Q9R020 330 aaKnown RBP13.09□□□□□ -0.31
Vps54-202ENSMUST00000109578 Kcnh4A2A5F7 1018 aa13.08□□□□□ -0.31
Vps54-202ENSMUST00000109578 GabrdP22933 449 aa13.08□□□□□ -0.31
Vps54-202ENSMUST00000109578 Bap1Q99PU7 728 aa13.08□□□□□ -0.31
Vps54-202ENSMUST00000109578 Lonrf3Q9D4H7 753 aa13.08□□□□□ -0.31
Vps54-202ENSMUST00000109578 Tob2Q9JM55 345 aa13.08□□□□□ -0.31
Vps54-202ENSMUST00000109578 Sox5P35710 763 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Rtel1Q0VGM9 1203 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Sik1Q60670 779 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Ift88Q61371 824 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Stac3Q8BZ71 360 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Trip6Q9Z1Y4 480 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Lrp6O88572 1613 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Prr16A3KMN5 304 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Cyp3a25O09158 503 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Myo1aO88329 1043 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 MycbpapQ5SUV2 932 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Kif2aP28740 705 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Mrps31Q61733 384 aaKnown RBP13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Pus7lQ8CE46 702 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Rbm19Q8R3C6 952 aaKnown RBP13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Tubb4aQ9D6F9 444 aa13.08□□□□□ -0.32
Vps54-202ENSMUST00000109578 Zfp597E9Q6S0 419 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Ccdc191J3QQ27 883 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Gnat2P50149 354 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Tcp11l2Q8K1H7 517 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Foxo3Q9WVH4 672 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Myh6Q02566 1938 aaKnown RBP13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Hspa4Q61316 841 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Tpm4Q6IRU2 248 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Olfr118Q7TRJ6 321 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Rnf41Q8BH75 317 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Anks1bQ8BIZ1 1259 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 1700029H14RikE9PY36 240 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 IntuQ059U7 942 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 1700013D24RikQ0P521 120 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Exoc5Q3TPX4 708 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Atp1a2Q6PIE5 1020 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Fam43aQ8BUP8 424 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Txndc5Q91W90 417 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Pcdha7Q91Y13 937 aa13.07□□□□□ -0.32
Vps54-202ENSMUST00000109578 Mapkapk5O54992 473 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Rbm15bQ6PHZ5 887 aaKnown RBP13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Tmco3Q8BH01 678 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Rcan1Q9JHG6 198 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Cul4bA2A432 970 aaKnown RBP13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Tdo2P48776 406 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Kiaa1468Q148V7 1216 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Cep128Q8BI22 1102 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Vps53Q8CCB4 832 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Ercc4Q9QZD4 917 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Stat5bP42232 786 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 SfswapQ3USH5 945 aaKnown RBP13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Gucy2cQ3UWA6 1072 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Usp50Q6P8X6 390 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Zswim4Q8C7B8 1101 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Stn1Q8K2X3 378 aa13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 NgdnQ9DB96 315 aaKnown RBP13.06□□□□□ -0.32
Vps54-202ENSMUST00000109578 Traf1P39428 409 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Rasal3Q8C2K5 1041 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Phf20l1Q8CCJ9 1013 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Mis18aQ9CZJ6 204 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Fbxo3Q9DC63 480 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Atp1a4Q9WV27 1032 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Mapk8ip1Q9WVI9 707 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Eif2ak3Q9Z2B5 1114 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Gucy1a2F8VQK3 730 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 IkbkbO88351 757 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Epc1Q8C9X6 813 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Ankrd31A0A140LI88 1765 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Btn2a2A4QPC6 514 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Ugt1a8D3Z748 530 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Ugt1a10E9PXN7 530 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Sval3Q76I99 144 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Triml1Q8BVP1 470 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Irs4Q9Z0Y7 1216 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Tas2r124Q7M718 309 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 MlphQ91V27 590 aa13.05□□□□□ -0.32
Vps54-202ENSMUST00000109578 Gm3409A0A0G2JE67 319 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 A0A1W2P6Q8 802 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Gm9048A0A1W2P7H4 802 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 A0A1W2P7S8 802 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 A0A1W2P7Z8 802 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Gm9046A0A1W2P855 802 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Bicdl1A0JNT9 577 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Anp32eP97822 260 aaKnown RBP13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Cdc5lQ6A068 802 aaKnown RBP13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 AatfQ9JKX4 526 aaKnown RBP13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 A0A0U1RNP2 1173 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Iqcb1Q8BP00 598 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 PdclQ9DBX2 301 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 ParvgQ9ERD8 331 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Sgpp1Q9JI99 430 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms