RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Rbm5Q91YE7 815 aaKnown RBP10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Jph2Q9ET78 696 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 GgcxQ9QYC7 757 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Nkx2-5P42582 318 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Pacs2Q3V3Q7 862 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ddx3xQ62167 662 aaKnown RBP10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Q8C6G1 249 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Dnajc28Q8VCE1 385 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Pex19Q8VCI5 299 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Pcdh18Q8VHR0 1134 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Arl10Q9QXJ4 243 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Prdm2A2A7B5 1709 aaKnown RBP10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Gm43638A0A0J9YU36 694 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Gm10471E9Q1C7 252 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Limch1Q3UH68 1057 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 CoilQ5SU73 570 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ehbp1Q69ZW3 1231 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Tmco6Q8BQX5 494 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Zfp202Q8C879 641 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ccdc28bQ8CEG5 200 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Lzts2Q91YU6 671 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Erc1Q99MI1 1120 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ddx25Q9QY15 484 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 GsdmeQ9Z2D3 512 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Gm17615E9Q9P2 165 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 ByslO54825 436 aaKnown RBP10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Psmb7P70195 277 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Trmt1Q3TX08 663 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 SlmapQ3URD3 845 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Tmem232Q5K6N0 675 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Pde3bQ61409 1100 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ifit1Q64282 463 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ccdc148Q6P5U8 527 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Atl2Q6PA06 583 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Cand2Q6ZQ73 1235 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Sfr1Q8BP27 319 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Cc2d1bQ8BRN9 848 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 HibchQ8QZS1 385 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Iffo2Q8R2V2 512 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 BrapQ99MP8 591 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Mrpl44Q9CY73 333 aaKnown RBP10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Angptl3Q9R182 455 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 PapolbQ9WVP6 641 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Adgrb3Q80ZF8 1522 aa10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 CltcQ68FD5 1675 aaKnown RBP10.9□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Kiaa1522A2A7S8 1013 aa10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ccdc24E9PUW8 296 aa10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Fndc1E9Q043 1732 aa10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Rpl13P47963 211 aaKnown RBP10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Mybl1P51960 751 aa10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Cct4P80315 539 aaKnown RBP10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Orc2Q60862 576 aaKnown RBP10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Trim28Q62318 834 aa10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Galnt17Q7TT15 598 aa10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Brf1Q8CFK2 676 aa10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Akap8lQ9R0L7 642 aaKnown RBP10.9□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Setdb1O88974 1307 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ttc21bQ0HA38 1315 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Mfsd4b4J3QNS5 503 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Psmd14O35593 310 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Eif5P59325 429 aaKnown RBP10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Krt39Q6IFX4 482 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 NostrinQ6WKZ7 506 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Champ1Q8K327 802 aaKnown RBP10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Tceanc2Q8R2M0 207 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ino80bQ99PT3 375 aaKnown RBP10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Gsdmdc1Q9D8T2 487 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Gm28510A0A087WP28 240 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Krt86P97861 486 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Arhgap44Q5SSM3 814 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Rasa3Q60790 834 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 TrhQ62361 256 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Epn1Q80VP1 575 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Atad2Q8CDM1 1040 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Pcdha5Q91Y15 934 aa10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Senp3Q9EP97 568 aaKnown RBP10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Xrn1P97789 1719 aaKnown RBP10.89□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Wnk3Q80XP9 1757 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 VimP20152 466 aaKnown RBP10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 G3bp2P97379 482 aaKnown RBP10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Tcp11Q01755 566 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Smarcad1Q04692 1021 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Cep126Q0VBV7 1103 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ag2Q3UPL5 249 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 DymQ8CHY3 669 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Tut1Q8R3F9 869 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Hps3Q91VB4 1002 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Alg1Q921Q3 482 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Dhx58Q99J87 678 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Haus2Q9CQS9 234 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Yeats4Q9CR11 227 aaKnown RBP10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Rnf138rt1Q9D9M9 248 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Atp6v1g2Q9WTT4 118 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Eftud2O08810 971 aaKnown RBP10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Rc3h1Q4VGL6 1130 aaKnown RBP10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Papd7Q6PB75 542 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Snrnp27Q8K194 155 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Ero1aQ8R180 464 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Polr3dQ91WD1 398 aa10.88□□□□□ -0.67
Hmgb1-201ENSMUST00000085546 Sar1bQ9CQC9 198 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms