RNA–Protein interactions for RNA: ENSMUST00000081170.8

Sgcb-201, Transcript of Beta-sarcoglycan, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sgcb, Length 3,786 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sgcb-201ENSMUST00000081170 Knop1Q9Z2Q2 478 aaKnown RBP13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Tcof1O08784 1320 aaKnown RBP13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Gm15262A0A140LIQ5 728 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Trove2O08848 538 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Vps54Q5SPW0 977 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Kif5bQ61768 963 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Polr2dQ9D7M8 142 aaKnown RBP13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Cdc45Q9Z1X9 566 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 ErbinQ80TH2 1402 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ift88Q61371 824 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Smc4Q8CG47 1286 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Eif2b5Q8CHW4 717 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Slf1Q8R3P9 1054 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 DnmbpQ6TXD4 1580 aa13.01□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Usp32F8VPZ3 1604 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Rgs12Q8CGE9 1381 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Foxn2E9Q7L6 429 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Gsto1O09131 240 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Luc7l2Q7TNC4 392 aaKnown RBP13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Slc35f6Q8VE96 372 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Prl7a2O54831 253 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Gdap1O88741 358 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Pold1P52431 1105 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 F13a1Q8BH61 732 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 4921504E06RikQ8CET2 560 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Q9D9H8 365 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Kif20bQ80WE4 1774 aaKnown RBP13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Aox1O54754 1333 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Tex11Q14AT2 947 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Tmed1Q3V009 227 aa13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 AdarQ99MU3 1178 aaKnown RBP13□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Mdc1Q5PSV9 1707 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Tcp10aQ80W76 438 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Pus3Q9JI38 481 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Tulp4Q9JIL5 1547 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Mybbp1aQ7TPV4 1344 aaKnown RBP12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ier5O89113 308 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ercc5P35689 1170 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Hcls1P49710 486 aaKnown RBP12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Rnpc3Q3UZ01 514 aaKnown RBP12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Prpf40bQ80W14 870 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ddx42Q810A7 929 aaKnown RBP12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ccser1Q8C0C4 895 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ptcd1Q8C2E4 695 aaKnown RBP12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Zscan20B2KFW1 1030 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Cep104Q80V31 926 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Iqcb1Q8BP00 598 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 AopepQ8BXQ6 817 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ccdc80Q8R2G6 949 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Cabp4Q8VHC5 271 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Mis18aQ9CZJ6 204 aa12.99□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Pde4bB1AWC9 736 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Zfp275G3X904 499 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ptpn20O55082 426 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Cdr2P97817 455 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Asic3Q6X1Y6 530 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ankk1Q8BZ25 745 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Fam217aQ9D9W6 419 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Cacna2d3Q9Z1L5 1091 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Gm7361D3Z6R1 267 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Gnat1P20612 350 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Cct4P80315 539 aaKnown RBP12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Sf3b2Q3UJB0 878 aaKnown RBP12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Rap1gap2Q5SVL6 712 aaKnown RBP12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Myo6Q64331 1265 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Naa35Q6PHQ8 725 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Epn1Q80VP1 575 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Chmp2bQ8BJF9 213 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 CntrobQ8CB62 887 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 P3h4Q8K2B0 443 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Tgs1Q923W1 853 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Marf1Q8BJ34 1730 aaKnown RBP12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Pik3c2bE9QAN8 1632 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Klhl34A2AI76 644 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Lrriq4A6H6A4 596 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 NalcnQ8BXR5 1738 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 DymQ8CHY3 669 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Aldh1l2Q8K009 923 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Snrnp27Q8K194 155 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Mei1Q9D4I2 1268 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Cbx6Q9DBY5 414 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Sil1Q9EPK6 465 aa12.98□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Gm21190A0A0G2JGJ6 266 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Fam207aP58468 219 aaKnown RBP12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Slc8a1P70414 970 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Igf2bp2Q5SF07 592 aaKnown RBP12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Myl10Q62082 202 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ehbp1Q69ZW3 1231 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Ccdc25Q78PG9 208 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Cdk19Q8BWD8 501 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Trap1Q9CQN1 706 aaKnown RBP12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Fam84aQ9D650 292 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 LratQ9JI60 231 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Als2Q920R0 1651 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 March10E9PX79 788 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Art2bO35975 289 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Gm1604bQ3TRG0 118 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Fchsd2Q3USJ8 740 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Carmil2Q3V3V9 1296 aa12.97□□□□□ -0.33
Sgcb-201ENSMUST00000081170 Vps41Q5KU39 853 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms