RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Myl3P09542 204 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Slf2Q6P9P0 1278 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Enox1Q8BHR2 643 aaKnown RBP16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 VmacQ8BP01 174 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Pde5aQ8CG03 865 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Ddx54Q8K4L0 874 aaKnown RBP16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Bap1Q99PU7 728 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Zranb2Q9R020 330 aaKnown RBP16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 MetP16056 1379 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 PnnO35691 725 aaKnown RBP16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Nmt2O70311 529 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Epb41l2O70318 988 aaKnown RBP16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 PparaP23204 468 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Lrrd1Q8C0R9 853 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Rbm28Q8CGC6 750 aaKnown RBP16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Wasf1Q8R5H6 559 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Krt23Q99PS0 422 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Thap2Q9D305 217 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Rapgef4Q9EQZ6 1011 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 PappaQ8R4K8 1624 aa16.55■□□□□ 0.24
Msx3-201ENSMUST00000055353 Lrp5Q91VN0 1614 aa16.54■□□□□ 0.24
Msx3-201ENSMUST00000055353 Kcnj4P52189 445 aa16.54■□□□□ 0.24
Msx3-201ENSMUST00000055353 Sec23aQ01405 765 aa16.54■□□□□ 0.24
Msx3-201ENSMUST00000055353 Rtel1Q0VGM9 1203 aa16.54■□□□□ 0.24
Msx3-201ENSMUST00000055353 Sun3Q5SS91 320 aa16.54■□□□□ 0.24
Msx3-201ENSMUST00000055353 Ercc6lQ8BHK9 1240 aa16.54■□□□□ 0.24
Msx3-201ENSMUST00000055353 Zscan20B2KFW1 1030 aa16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Fkbp1aP26883 108 aaKnown RBP16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Esco1Q69Z69 843 aa16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Tbc1d5Q80XQ2 815 aa16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Olfm5Q8BU90 496 aa16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Paf1Q8K2T8 535 aa16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Tob2Q9JM55 345 aa16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Vstm4T1NXB5 319 aa16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 AfdnQ9QZQ1 1820 aaKnown RBP16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Jmjd4Q8BFT6 427 aa16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Caps2Q8BUG5 550 aa16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Nod2Q8K3Z0 1020 aa16.53■□□□□ 0.24
Msx3-201ENSMUST00000055353 Nab2Q61127 525 aa16.52■□□□□ 0.24
Msx3-201ENSMUST00000055353 Hip1rQ9JKY5 1068 aa16.52■□□□□ 0.24
Msx3-201ENSMUST00000055353 Erich4Q3UNU4 136 aa16.52■□□□□ 0.23
Msx3-201ENSMUST00000055353 Mrps31Q61733 384 aaKnown RBP16.52■□□□□ 0.23
Msx3-201ENSMUST00000055353 NesQ6P5H2 1864 aaKnown RBP16.52■□□□□ 0.23
Msx3-201ENSMUST00000055353 Ccdc12Q8R344 166 aaKnown RBP16.52■□□□□ 0.23
Msx3-201ENSMUST00000055353 Trip6Q9Z1Y4 480 aa16.52■□□□□ 0.23
Msx3-201ENSMUST00000055353 Kcnh4A2A5F7 1018 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 IkbkbO88351 757 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 GabrdP22933 449 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Sox5P35710 763 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Tdo2P48776 406 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Dusp9Q7TNL7 452 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Txndc5Q91W90 417 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Lonrf3Q9D4H7 753 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Foxo3Q9WVH4 672 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Znfx1Q8R151 1909 aaKnown RBP16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Cul4bA2A432 970 aaKnown RBP16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Zfp597E9Q6S0 419 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Cyp3a25O09158 503 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Myo1aO88329 1043 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Kif2aP28740 705 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 TbcaP48428 108 aaKnown RBP16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Ifit1bl2Q3U687 466 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Anks1bQ8BIZ1 1259 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Phf20l1Q8CCJ9 1013 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Pus7lQ8CE46 702 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Tcp11l2Q8K1H7 517 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Trim34aQ99PP6 485 aa16.51■□□□□ 0.23
Msx3-201ENSMUST00000055353 Dhx8A2A4P0 1244 aaKnown RBP16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Pet2A2AHY8 747 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Prr16A3KMN5 304 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 MycbpapQ5SUV2 932 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Sik1Q60670 779 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Ift88Q61371 824 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Rasal3Q8C2K5 1041 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Ercc4Q9QZD4 917 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Myh3P13541 1940 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Ccdc191J3QQ27 883 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 1700013D24RikQ0P521 120 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Usp50Q6P8X6 390 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Olfr118Q7TRJ6 321 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Tubb4aQ9D6F9 444 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 SelenooQ9DBC0 667 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Rcan1Q9JHG6 198 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 Eif2ak3Q9Z2B5 1114 aa16.5■□□□□ 0.23
Msx3-201ENSMUST00000055353 DccP70211 1447 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Tpm3-rs7D3Z2H9 248 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 MycnP03966 462 aaKnown RBP16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Pde4dQ01063 747 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Hspa4Q61316 841 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Atp1a2Q6PIE5 1020 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Epc1Q8C9X6 813 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Smc2Q8CG48 1191 aaKnown RBP16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Stn1Q8K2X3 378 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 MlphQ91V27 590 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Pcdha7Q91Y13 937 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Cfap44E9Q5M6 1843 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Ugt1a8D3Z748 530 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Ugt1a10E9PXN7 530 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 1700029H14RikE9PY36 240 aa16.49■□□□□ 0.23
Msx3-201ENSMUST00000055353 Traf1P39428 409 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms