RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Ppp1r11Q8K1L5 131 aa26.55■■□□□ 1.84
Upf3a-201ENSMUST00000043767 NaspQ99MD9 773 aaKnown RBP26.55■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Plxnb2B2RXS4 1842 aa26.55■■□□□ 1.84
Upf3a-201ENSMUST00000043767 CfhP06909 1234 aa26.54■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Babam1Q3UI43 333 aa26.54■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Ccdc66Q6NS45 935 aa26.54■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Ano1Q8BHY3 960 aa26.54■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Terf2ipQ91VL8 393 aa26.54■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Mad1l1Q9WTX8 717 aaKnown RBP26.54■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Leo1Q5XJE5 667 aa26.54■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Ifit1Q64282 463 aa26.54■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Shtn1Q8K2Q9 631 aa26.54■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Becn1O88597 448 aa26.53■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Tbc1d9bQ5SVR0 1263 aa26.53■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Col1a1P11087 1453 aa26.53■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Mageb2A2AHM0 380 aa26.53■■□□□ 1.84
Upf3a-201ENSMUST00000043767 1700013D24RikQ0P521 120 aa26.53■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Tacc1Q6Y685 774 aa26.53■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Syce3B5KM66 88 aa26.52■■□□□ 1.84
Upf3a-201ENSMUST00000043767 Zbtb21E9Q444 1094 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Cap1P40124 474 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Wnt10bP48614 389 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Foxp1P58462 705 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 GmpsQ3THK7 693 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Dpp8Q80YA7 892 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Rtn1Q8K0T0 780 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Eif6O55135 245 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Tom1l2Q5SRX1 507 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Mad2l2Q9D752 211 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Rcan1Q9JHG6 198 aa26.51■■□□□ 1.83
Upf3a-201ENSMUST00000043767 LrmpQ60664 539 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Akap8Q9DBR0 687 aaKnown RBP26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Tjap1Q9DCD5 539 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 NynrinQ5DTZ0 1840 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 TrdnE9Q9K5 693 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Pde4aO89084 844 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Gadd45bP22339 160 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Thrap3Q569Z6 951 aaKnown RBP26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 PaoxQ8C0L6 504 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Ndfip2Q91ZP6 311 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Pik3ap1Q9EQ32 811 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Tmem47Q9JJG6 181 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Rcan3Q9JKK0 239 aa26.5■■□□□ 1.83
Upf3a-201ENSMUST00000043767 A0A1W2P6Q8 802 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Gm9048A0A1W2P7H4 802 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 A0A1W2P7Z8 802 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Gm9046A0A1W2P855 802 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Zscan18E9PUD6 809 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Slc27a3O88561 667 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Alppl2P24823 529 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Cplx2P84086 134 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Scg2Q03517 617 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Gse1Q3U3C9 1213 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Scnn1aQ61180 699 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Ccdc82Q6PG04 518 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Bcorl1A2AQH4 1781 aa26.49■■□□□ 1.83
Upf3a-201ENSMUST00000043767 A430078G23RikE9Q7Y4 484 aa26.48■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Traf3ip1Q149C2 625 aa26.48■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Cdkl5Q3UTQ8 938 aa26.48■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Pip5kl1Q6U7H8 395 aa26.48■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Slitrk3Q810B9 980 aa26.48■■□□□ 1.83
Upf3a-201ENSMUST00000043767 UtrnE9Q6R7 3430 aa26.48■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Klrg2Q3UM83 387 aa26.48■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Zbtb39Q6PDK0 712 aa26.48■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Gimap7Q8R379 293 aa26.48■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Ubac1Q8VDI7 409 aa26.48■■□□□ 1.83
Upf3a-201ENSMUST00000043767 LdhdQ7TNG8 484 aa26.47■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Zfp317Q8C0Q5 607 aa26.47■■□□□ 1.83
Upf3a-201ENSMUST00000043767 A0A1Y7VML8 143 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Prss51A0A286YDY8 319 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Usp5P56399 858 aaKnown RBP26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Zc3h15Q3TIV5 426 aaKnown RBP26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Tmem39bQ810L4 492 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 SdsQ8VBT2 327 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Clrn2B2RVW2 232 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Zscan25B2RX31 543 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Ubash3aQ3V3E1 624 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Ces3aQ63880 571 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Tbc1d30Q69ZT9 766 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Kbtbd13Q8C828 458 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Ces3bQ8VCU1 571 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Ccar2Q8VDP4 922 aaKnown RBP26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Znf287Q9EQB9 759 aa26.46■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Stag2O35638 1231 aa26.45■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Rps12P63323 132 aaKnown RBP26.45■■□□□ 1.83
Upf3a-201ENSMUST00000043767 LyarQ08288 388 aaKnown RBP26.45■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Scaf8Q6DID3 1268 aa26.45■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Trappc12Q8K2L8 797 aa26.45■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Tgm5Q9D7I9 724 aa26.45■■□□□ 1.83
Upf3a-201ENSMUST00000043767 Trmt112Q9DCG9 125 aa26.45■■□□□ 1.83
Upf3a-201ENSMUST00000043767 NinQ61043 2035 aa26.45■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Tmtc2Q56A06 836 aa26.45■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Tbc1d5Q80XQ2 815 aa26.45■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Mtmr4Q91XS1 1190 aa26.45■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Cep89Q9CZX2 791 aa26.45■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Sema3fO88632 785 aa26.44■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Calm1P0DP26 149 aaKnown RBP26.44■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Calm2P0DP27 149 aaKnown RBP26.44■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Calm3P0DP28 149 aaKnown RBP26.44■■□□□ 1.82
Upf3a-201ENSMUST00000043767 Lrch1P62046 709 aa26.44■■□□□ 1.82
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms