RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Krt24A1L317 512 aa17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Ccdc57Q6PHN1 1016 aa17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 E4f1Q8CCE9 783 aa17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Sik3Q6P4S6 1311 aa17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Gm5624F6ZZG8 207 aa17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Epb41l2O70318 988 aaKnown RBP17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Pafah1b1P63005 410 aaKnown RBP17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Tmtc2Q56A06 836 aa17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Ccdc181Q80ZU5 509 aa17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Med1Q925J9 1575 aa17.02■□□□□ 0.31
Scaf4-201ENSMUST00000039280 PcQ05920 1178 aa17.02■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Prpf38aQ4FK66 312 aaKnown RBP17.02■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Sept9Q80UG5 583 aa17.02■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Tktl2Q9D4D4 627 aa17.02■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Gtf2iQ9ESZ8 998 aaKnown RBP17.02■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Pde5aQ8CG03 865 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 CenphQ9QYM8 241 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Gdf11Q9Z1W4 405 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 CalrP14211 416 aaKnown RBP17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Hmgb2P30681 210 aaKnown RBP17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Exosc10P56960 887 aaKnown RBP17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Lins1Q3U1D0 764 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Large2Q5XPT3 690 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Ctdspl2Q8BG15 465 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Lrrd1Q8C0R9 853 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Tubgcp2Q921G8 905 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Smarcc2Q6PDG5 1213 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Atp1a2Q6PIE5 1020 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 QarsQ8BML9 775 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Stk39Q9Z1W9 556 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Rps6ka4Q9Z2B9 773 aa17.01■□□□□ 0.31
Scaf4-201ENSMUST00000039280 MycnP03966 462 aaKnown RBP17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Uba5Q8VE47 403 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Dph6Q9CQ28 267 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Cnpy3Q9DAU1 276 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Col20a1Q923P0 1320 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Gna11P21278 359 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Pde1cQ64338 706 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 SltmQ8CH25 1031 aaKnown RBP17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Slc4a8Q8JZR6 1089 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 ChmQ9QXG2 665 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Cyp2j7A0A140T8U1 504 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Cyp3a59D3Z2W7 503 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Ess2O70279 479 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Hdgfl1Q2VPR5 283 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Gm5592Q3V0A6 857 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Map3k11Q80XI6 850 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Hps6Q8BLY7 805 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Stag1Q9D3E6 1258 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Q9D5Q8 446 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Chaf1aQ9QWF0 911 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Camta1A2A891 1682 aa17■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Erich4Q3UNU4 136 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Nme8Q715T0 586 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 VmacQ8BP01 174 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Ppfibp1Q8C8U0 969 aaKnown RBP16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 McamQ8R2Y2 648 aaKnown RBP16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Usp53P15975 1069 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Cyp2d10P24456 504 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Znf496Q5SXI5 585 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Ctr9Q62018 1173 aaKnown RBP16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Podxl2Q8CAE9 603 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Exoc1Q8R3S6 894 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Arpp21Q9DCB4 807 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Ubr1O70481 1757 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 HelbQ6NVF4 1074 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Otop3Q80UF9 577 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Diaph1O08808 1255 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Cdk4P30285 303 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 C87499Q3UX49 493 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 DpydQ8CHR6 1025 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 AdpgkQ8VDL4 496 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Carmil3Q3UFQ8 1375 aa16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Kiaa0232Q80U59 1396 aaKnown RBP16.99■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Gm13023A2A8N2 498 aa16.98■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Rnf123Q5XPI3 1314 aa16.98■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Exoc3l2D3YUP5 789 aa16.98■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Kif22Q3V300 660 aa16.98■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Dnm3Q8BZ98 863 aa16.98■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Ftsj3Q9DBE9 838 aaKnown RBP16.98■□□□□ 0.31
Scaf4-201ENSMUST00000039280 NppbP40753 121 aa16.98■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Ap5z1Q3U829 807 aa16.98■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Tsg101Q61187 391 aa16.98■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Krt79Q8VED5 531 aa16.98■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Terb1Q8C0V1 768 aa16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Eya3P97480 510 aa16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Oxr1Q4KMM3 866 aa16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Edrf1Q6GQV7 1239 aa16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Ttll4Q80UG8 1193 aa16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Pus7lQ8CE46 702 aa16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 HibadhQ99L13 335 aaKnown RBP16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Cul5Q9D5V5 780 aa16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Mx1P09922 631 aa16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Psmb7P70195 277 aa16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Specc1lQ2KN98 1118 aaKnown RBP16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Gpr108Q91WD0 569 aa16.97■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Ano3A2AHL1 981 aa16.96■□□□□ 0.31
Scaf4-201ENSMUST00000039280 HmmrQ00547 794 aaKnown RBP16.96■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Bbof1Q3V079 533 aa16.96■□□□□ 0.31
Scaf4-201ENSMUST00000039280 Panx2Q6IMP4 677 aa16.96■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 59.3 ms