RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Bicdl2Q8CHW5 507 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Msh6P54276 1358 aaKnown RBP11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gm5935Q497S0 212 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Nxf7Q80SZ6 620 aaKnown RBP11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Micall1Q8BGT6 870 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 PaoxQ8C0L6 504 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Tubgcp2Q921G8 905 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Tmco5aQ9D9D5 303 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ccnt1Q9QWV9 724 aaKnown RBP11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Clic4Q9QYB1 253 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Lcmt1A0A0U1RNF2 332 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 A0A1W2P6Q8 802 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gm9048A0A1W2P7H4 802 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 A0A1W2P7Z8 802 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gm9046A0A1W2P855 802 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 InhbeO08717 350 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 QarsQ8BML9 775 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Zswim4Q8C7B8 1101 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Spats2Q8K1N4 545 aaKnown RBP11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gm3409A0A0G2JE67 319 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Map7d1A2AJI0 846 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Psmc2P46471 433 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Capza3P70190 299 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 DSCC1Q14AI0 399 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Cap2Q9CYT6 476 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Zfp781Q0P5U5 243 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Armc2Q3URY6 854 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Uba5Q8VE47 403 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Zcrb1Q9CZ96 217 aaKnown RBP11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Nlrp5Q9R1M5 1163 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Kidins220E9Q9B7 1793 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Hecw2Q6I6G8 1578 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Lipo1J3QME6 396 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gbp1Q01514 589 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Asic2Q925H0 512 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Dctpp1Q9QY93 170 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Myo1aO88329 1043 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Atp6v1aP50516 617 aaKnown RBP11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Eya3P97480 510 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Specc1Q5SXY1 1067 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Skor1Q8BX46 964 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Taok3Q8BYC6 898 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Traf3ip3Q8C0G2 513 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Telo2Q9DC40 840 aaKnown RBP11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Adarb2Q9JI20 745 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Chd1P40201 1711 aa11.5□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Nme8Q715T0 586 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Fam177a1Q8BR63 207 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 RalylQ8BTF8 293 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Cdca7Q9D0M2 382 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 RereQ80TZ9 1558 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Nrxn1Q9CS84 1514 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Diaph1O08808 1255 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Frat2Q8K025 231 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Stn1Q8K2X3 378 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 StambpQ9CQ26 424 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Rcan1Q9JHG6 198 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Atp10bB1AWN4 1474 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Myo5cE9Q1F5 1742 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gm28510A0A087WP28 240 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ano3A2AHL1 981 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Clca2Q8BG22 942 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ints4Q8CIM8 964 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ak9G3UYQ4 1894 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gm4758L7N258 96 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Mtx1P47802 317 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Psmb7P70195 277 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Tax1bp1Q3UKC1 814 aaKnown RBP11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 L1td1Q587J6 782 aaKnown RBP11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 KaznQ69ZS8 779 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Bicd1Q8BR07 835 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Flt4P35917 1363 aa11.49□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Prpf38aQ4FK66 312 aaKnown RBP11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Zcchc11B2RX14 1644 aaKnown RBP11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Topbp1Q6ZQF0 1515 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Nr1i2O54915 431 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Haus1Q8BHX1 278 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Cyp2d12Q8BVD2 504 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Etf1Q8BWY3 437 aaKnown RBP11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Cfap57Q9D180 1249 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Trmt44Q9D2Q2 713 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Lekr1B2RVN1 116 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ppp1r9aH3BJD6 1292 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Esr2O08537 530 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Kifap3P70188 793 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Atp1b3P97370 278 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Acot10Q32MW3 439 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Dcaf17Q3TUL7 519 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Hps4Q99KG7 671 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Mkrn1Q9QXP6 481 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Add2Q9QYB8 725 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Psma7Q9Z2U0 248 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Mroh6V9GX81 722 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Usp28Q5I043 1051 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Hps6Q8BLY7 805 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Dnaaf2Q8BPI1 814 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Apol10aQ8CCA5 318 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Mettl5Q8K1A0 209 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Mrpl50Q8VDT9 159 aaKnown RBP11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Adcy3Q8VHH7 1145 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms