RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Lrrn2Q6PHP6 730 aa11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 Luc7l2Q7TNC4 392 aaKnown RBP11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 P3h4Q8K2B0 443 aa11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 Zbtb3Q91X45 518 aa11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 Trim42Q9D2H5 723 aa11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 Nop56Q9D6Z1 580 aaKnown RBP11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 Lama4P97927 1816 aa11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 Exosc10P56960 887 aaKnown RBP11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 Tmem232Q5K6N0 675 aa11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 Ttc12Q8BW49 704 aa11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 Nxnl2Q9D531 156 aa11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 Nup153E9Q3G8 1462 aaKnown RBP11.28□□□□□ -0.6
Copb1-201ENSMUST00000033012 FscbA1EGX6 1074 aa11.27□□□□□ -0.6
Copb1-201ENSMUST00000033012 Enc1O35709 589 aa11.27□□□□□ -0.6
Copb1-201ENSMUST00000033012 CidebO70303 219 aa11.27□□□□□ -0.6
Copb1-201ENSMUST00000033012 Pth1rP41593 591 aa11.27□□□□□ -0.6
Copb1-201ENSMUST00000033012 Sap30bpQ02614 308 aa11.27□□□□□ -0.6
Copb1-201ENSMUST00000033012 Ccdc148Q6P5U8 527 aa11.27□□□□□ -0.6
Copb1-201ENSMUST00000033012 Gm21985Q6P6P5 1106 aa11.27□□□□□ -0.6
Copb1-201ENSMUST00000033012 Ctdp1Q7TSG2 960 aa11.27□□□□□ -0.6
Copb1-201ENSMUST00000033012 Cep72Q9D3R3 646 aa11.27□□□□□ -0.6
Copb1-201ENSMUST00000033012 Angptl3Q9R182 455 aa11.27□□□□□ -0.6
Copb1-201ENSMUST00000033012 Map7d1A2AJI0 846 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Cyp26c1B2RXA7 518 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Snx12O70493 165 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Pkn1P70268 946 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ptcd1Q8C2E4 695 aaKnown RBP11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Dnm1lQ8K1M6 742 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Tubgcp2Q921G8 905 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Bzw1Q9CQC6 419 aaKnown RBP11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Prpf38aQ4FK66 312 aaKnown RBP11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Tgfb1i1Q62219 461 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Rufy1Q8BIJ7 712 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Als2cr12Q8BVM7 383 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Cwf19l1Q8CI33 537 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Lrrc45Q8CIM1 670 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Lrrfip2Q91WK0 415 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 GgcxQ9QYC7 757 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Peg12Q9WVA7 283 aa11.27□□□□□ -0.61
Copb1-201ENSMUST00000033012 Epha2Q03145 977 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Sf3b2Q3UJB0 878 aaKnown RBP11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Klra6Q60653 266 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Trpc6Q61143 930 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Bend3Q6PAL0 825 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Trpa1Q8BLA8 1125 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Wdr35Q8BND3 1181 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Usp20Q8C6M1 916 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Srgap2Q91Z67 1071 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Baiap2l1Q9DBJ3 514 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Tpm3-rs7D3Z2H9 248 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Dapk3O54784 448 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Pa2g4P50580 394 aaKnown RBP11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Arhgef16Q3U5C8 713 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Specc1Q5SXY1 1067 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Anks1bQ8BIZ1 1259 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Pms1Q8K119 917 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Fam217aQ9D9W6 419 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Slc12a4Q9JIS8 1085 aa11.26□□□□□ -0.61
Copb1-201ENSMUST00000033012 Diaph2O70566 1098 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Zap70P43404 618 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Cyfip2Q5SQX6 1253 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 CoilQ5SU73 570 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ift88Q61371 824 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Krt42Q6IFX2 452 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Cep104Q80V31 926 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 U2af1l4Q8BGJ9 220 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 D130040H23RikQ8BII3 405 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Thoc1Q8R3N6 657 aaKnown RBP11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Usp15Q8R5H1 981 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Plcb4Q91UZ1 1175 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 SncbQ91ZZ3 133 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Alg1Q921Q3 482 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ftsj3Q9DBE9 838 aaKnown RBP11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Kiaa1522A2A7S8 1013 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Trove2O08848 538 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Fam71bQ5STT6 665 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Dnajc28Q8VCE1 385 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 SelenooQ9DBC0 667 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Egfl6Q9JJZ5 550 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Mst1rQ62190 1378 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Etnk2A7MCT6 385 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Pdrg1P59048 133 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Prpf40bQ80W14 870 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Gpcpd1Q8C0L9 675 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Q8C5K5 320 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Mmgt1Q8K273 131 aaKnown RBP11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Alg3Q8K2A8 438 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Slc26a8Q8R0C3 999 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Tut1Q8R3F9 869 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Dbndd2Q9CRD4 158 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Uts2Q9QZQ3 123 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 PtprtQ99M80 1454 aa11.25□□□□□ -0.61
Copb1-201ENSMUST00000033012 Cnksr1A2A9K7 700 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Pfkfb3A7UAK5 555 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Gm20425E9Q035 978 aaKnown RBP11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Snap23O09044 210 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Klc1O88447 541 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Rb1P13405 921 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 SfswapQ3USH5 945 aaKnown RBP11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Vps54Q5SPW0 977 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms