RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 Ccdc138Q0VF22 680 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ddx58Q6Q899 926 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ythdf3Q8BYK6 585 aaKnown RBP13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 StrbpQ91WM1 672 aaKnown RBP13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Six6os1Q9CTN5 574 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 NapgQ9CWZ7 312 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Rrs1Q9CYH6 365 aaKnown RBP13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Efcc1Q9JJF6 558 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Clic4Q9QYB1 253 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Snx1Q9WV80 522 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Tnks1bp1P58871 1720 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Gm43638A0A0J9YU36 694 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Slc12a2P55012 1205 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Washc4Q3UMB9 1173 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 NntQ61941 1086 aaKnown RBP13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Stk38Q91VJ4 465 aa13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 AdarQ99MU3 1178 aaKnown RBP13.12□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Gcom1E9PZ54 550 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Atf5O70191 283 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 MyzapQ3UIJ9 466 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Krt39Q6IFX4 482 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ccdc82Q6PG04 518 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Rassf6Q80UQ2 353 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Kif2bQ8C0N1 668 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ccdc80Q8R2G6 949 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Tut1Q8R3F9 869 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ccdc97Q9DBT3 340 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Bag3Q9JLV1 577 aaKnown RBP13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Vstm4T1NXB5 319 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Tns2Q8CGB6 1400 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Npc1l1Q6T3U4 1333 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Irgm2A0A140LIF8 407 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Il27raO70394 623 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Slc8a1P70414 970 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Zcwpw1Q6IR42 630 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 RarsQ9D0I9 660 aaKnown RBP13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Bub1bQ9Z1S0 1052 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Myo5bP21271 1818 aa13.11□□□□□ -0.31
Vamp1-201ENSMUST00000032487 A0A0U1RNP2 1173 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ccdc152E9PX14 254 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Arhgap6O54834 987 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Sem1P60897 70 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Clul1Q3ZRW6 464 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Pde1cQ64338 706 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Nxf7Q80SZ6 620 aaKnown RBP13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Exd1Q8CDF7 570 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Tldc1Q8K0P3 455 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ssh3Q8K330 649 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Sash3Q8K352 380 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 MbipQ99LQ1 341 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Tmed5Q9CXE7 229 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 PdhbQ9D051 359 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Lztfl1Q9JHQ5 299 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Pfkfb1P70266 471 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Flt3Q00342 1000 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Top1Q04750 767 aaKnown RBP13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Agtpbp1Q641K1 1218 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Bpifb6Q8BU51 449 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Afg3l2Q8JZQ2 802 aaKnown RBP13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Yeats4Q9CR11 227 aaKnown RBP13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Riok3Q9DBU3 519 aaKnown RBP13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Plekho1Q9JIY0 408 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Arhgap33Q80YF9 1305 aa13.1□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Zap70P43404 618 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Eif5P59325 429 aaKnown RBP13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ppfia3P60469 1194 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Myo1fP70248 1099 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Sptlc2P97363 560 aaKnown RBP13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Tgfb1i1Q62219 461 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ssfa2Q922B9 1252 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Entpd5Q9WUZ9 427 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 VirmaA2AIV2 1811 aaKnown RBP13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Pa2g4P50580 394 aaKnown RBP13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Nlrp4cQ3TKR3 982 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Eif3j1Q3UGC7 261 aaKnown RBP13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Eif3j2Q66JS6 263 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ankrd24Q80VM7 985 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Q8BWG4 1187 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ccdc158Q8CDI6 1109 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Klc3Q91W40 508 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Vnn1Q9Z0K8 512 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Atp12aQ9Z1W8 1035 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Nkx2-5P42582 318 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Vars2Q3U2A8 1060 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Sycp1Q62209 993 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Sorbs1Q62417 1290 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Bend3Q6PAL0 825 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Necab1Q8BG18 352 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Cyp2d12Q8BVD2 504 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Srek1Q8BZX4 494 aaKnown RBP13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Leng8Q8CBY3 785 aaKnown RBP13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Zbtb3Q91X45 518 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Pcdhb3Q91XZ7 784 aa13.09□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Adamtsl1Q8BLI0 1745 aa13.08□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Pde4bB1AWC9 736 aa13.08□□□□□ -0.32
Vamp1-201ENSMUST00000032487 Sstr3P30935 428 aa13.08□□□□□ -0.32
Vamp1-201ENSMUST00000032487 Cct2P80314 535 aaKnown RBP13.08□□□□□ -0.32
Vamp1-201ENSMUST00000032487 Gbp4Q61107 620 aa13.08□□□□□ -0.32
Vamp1-201ENSMUST00000032487 Cep131Q62036 1060 aa13.08□□□□□ -0.32
Vamp1-201ENSMUST00000032487 Naa35Q6PHQ8 725 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 62.3 ms