RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 B930094E09RikQ8C4T2 136 aa8.99□□□□□ -0.97
Shroom3-211ENSMUST00000225438 BptfA2A654 3036 aaKnown RBP8.99□□□□□ -0.97
Shroom3-211ENSMUST00000225438 Frem2Q6NVD0 3160 aa8.98□□□□□ -0.97
Shroom3-211ENSMUST00000225438 Tenm4Q3UHK6 2771 aa8.98□□□□□ -0.97
Shroom3-211ENSMUST00000225438 Unc80Q8BLN6 3261 aa8.94□□□□□ -0.98
Shroom3-211ENSMUST00000225438 Lrrc37aB1AWG4 3215 aa8.94□□□□□ -0.98
Shroom3-211ENSMUST00000225438 Szt2A2A9C3 3431 aa8.89□□□□□ -0.99
Shroom3-211ENSMUST00000225438 Adgrg4B7ZCC9 3073 aa8.87□□□□□ -0.99
Shroom3-211ENSMUST00000225438 FryE9Q8I9 3020 aa8.86□□□□□ -0.99
Shroom3-211ENSMUST00000225438 NbeaQ9EPN1 2936 aa8.86□□□□□ -0.99
Shroom3-211ENSMUST00000225438 Pdzd2E9Q1M1 2796 aa8.82□□□□□ -1
Shroom3-211ENSMUST00000225438 Zzef1Q5SSH7 2924 aa8.81□□□□□ -1
Shroom3-211ENSMUST00000225438 Celsr3Q91ZI0 3301 aa8.81□□□□□ -1
Shroom3-211ENSMUST00000225438 Wdfy4E9Q2M9 3149 aa8.8□□□□□ -1
Shroom3-211ENSMUST00000225438 Gm17416Q30KP4 66 aa8.8□□□□□ -1
Shroom3-211ENSMUST00000225438 FlncQ8VHX6 2726 aaKnown RBP8.8□□□□□ -1
Shroom3-211ENSMUST00000225438 Dmxl2Q8BPN8 3032 aa8.8□□□□□ -1
Shroom3-211ENSMUST00000225438 FrylF8VQ05 3007 aa8.79□□□□□ -1
Shroom3-211ENSMUST00000225438 2310079G19RikQ9D6L6 185 aa8.78□□□□□ -1
Shroom3-211ENSMUST00000225438 Lama1P19137 3084 aa8.74□□□□□ -1.01
Shroom3-211ENSMUST00000225438 Celsr2Q9R0M0 2920 aa8.68□□□□□ -1.02
Shroom3-211ENSMUST00000225438 Nf1Q04690 2841 aa8.65□□□□□ -1.02
Shroom3-211ENSMUST00000225438 2210017I01RikA0A0A6YVV1 95 aa8.64□□□□□ -1.03
Shroom3-211ENSMUST00000225438 Gm9736A0A1W2P7N1 277 aa8.64□□□□□ -1.03
Shroom3-211ENSMUST00000225438 Dchs2A0A0A6YW72 3346 aa8.62□□□□□ -1.03
Shroom3-211ENSMUST00000225438 Brca2P97929 3329 aa8.6□□□□□ -1.03
Shroom3-211ENSMUST00000225438 Prm2P07978 107 aa8.6□□□□□ -1.03
Shroom3-211ENSMUST00000225438 Tenm1Q9WTS4 2731 aa8.59□□□□□ -1.03
Shroom3-211ENSMUST00000225438 Gm17402F6Z0L5 76 aa8.59□□□□□ -1.03
Shroom3-211ENSMUST00000225438 DspE9Q557 2883 aaKnown RBP8.59□□□□□ -1.04
Shroom3-211ENSMUST00000225438 Trank1Q8BV79 2999 aa8.57□□□□□ -1.04
Shroom3-211ENSMUST00000225438 Chd9Q8BYH8 2885 aa8.55□□□□□ -1.04
Shroom3-211ENSMUST00000225438 Gm9918Q8BUR5 174 aa8.55□□□□□ -1.04
Shroom3-211ENSMUST00000225438 Tenm3Q9WTS6 2715 aa8.54□□□□□ -1.04
Shroom3-211ENSMUST00000225438 LrbaQ9ESE1 2856 aa8.53□□□□□ -1.04
Shroom3-211ENSMUST00000225438 Megf8P60882 2789 aa8.48□□□□□ -1.05
Shroom3-211ENSMUST00000225438 Tenm2Q9WTS5 2764 aa8.47□□□□□ -1.05
Shroom3-211ENSMUST00000225438 Col6a3E9PWQ3 3284 aa8.43□□□□□ -1.06
Shroom3-211ENSMUST00000225438 Zfhx3Q61329 3726 aa8.35□□□□□ -1.07
Shroom3-211ENSMUST00000225438 Gm19668J3QMD1 248 aa8.32□□□□□ -1.08
Shroom3-211ENSMUST00000225438 VcanQ62059 3357 aa8.3□□□□□ -1.08
Shroom3-211ENSMUST00000225438 Dchs1E9PVD3 3291 aa8.25□□□□□ -1.09
Shroom3-211ENSMUST00000225438 4933428G20RikQ9D3X4 101 aa8.24□□□□□ -1.09
Shroom3-211ENSMUST00000225438 Gm10318A0A1W2P728 225 aa8.23□□□□□ -1.09
Shroom3-211ENSMUST00000225438 Helz2E9QAM5 2947 aaKnown RBP8.21□□□□□ -1.09
Shroom3-211ENSMUST00000225438 Wdfy3Q6VNB8 3508 aa8.2□□□□□ -1.1
Shroom3-211ENSMUST00000225438 Gm11939A2A592 99 aa8.19□□□□□ -1.1
Shroom3-211ENSMUST00000225438 Krtap13-1Q8K198 168 aa8.15□□□□□ -1.1
Shroom3-211ENSMUST00000225438 Krtap19-5O08632 62 aa8.13□□□□□ -1.11
Shroom3-211ENSMUST00000225438 SpegQ62407 3262 aa8.12□□□□□ -1.11
Shroom3-211ENSMUST00000225438 RelnQ60841 3461 aa8.12□□□□□ -1.11
Shroom3-211ENSMUST00000225438 Myo15aQ9QZZ4 3511 aa8.09□□□□□ -1.11
Shroom3-211ENSMUST00000225438 Crct1Q6PAI5 102 aa8.08□□□□□ -1.12
Shroom3-211ENSMUST00000225438 Akap9Q70FJ1 3797 aa8.01□□□□□ -1.13
Shroom3-211ENSMUST00000225438 Muc5acE9QAQ8 3455 aa8□□□□□ -1.13
Shroom3-211ENSMUST00000225438 DmdP11531 3678 aa7.97□□□□□ -1.13
Shroom3-211ENSMUST00000225438 Vps13cQ8BX70 3748 aa7.97□□□□□ -1.13
Shroom3-211ENSMUST00000225438 Krtap3-1A2A591 98 aa7.92□□□□□ -1.14
Shroom3-211ENSMUST00000225438 VwfQ8CIZ8 2813 aa7.9□□□□□ -1.14
Shroom3-211ENSMUST00000225438 OtogO55225 2910 aa7.9□□□□□ -1.14
Shroom3-211ENSMUST00000225438 Csmd1Q923L3 3564 aa7.86□□□□□ -1.15
Shroom3-211ENSMUST00000225438 Krtap3-2Q9D638 99 aa7.83□□□□□ -1.16
Shroom3-211ENSMUST00000225438 Krtap3-3Q9D7P0 99 aa7.83□□□□□ -1.16
Shroom3-211ENSMUST00000225438 SpenQ62504 3644 aaKnown RBP7.73□□□□□ -1.17
Shroom3-211ENSMUST00000225438 Gm6358A0A087WPH4 74 aa7.64□□□□□ -1.19
Shroom3-211ENSMUST00000225438 Fbn1Q61554 2873 aaKnown RBP7.63□□□□□ -1.19
Shroom3-211ENSMUST00000225438 Smg1Q8BKX6 3658 aaKnown RBP7.62□□□□□ -1.19
Shroom3-211ENSMUST00000225438 Gm884A2A9H6 3643 aa7.59□□□□□ -1.19
Shroom3-211ENSMUST00000225438 Lama5Q61001 3718 aa7.51□□□□□ -1.21
Shroom3-211ENSMUST00000225438 Col7a1Q63870 2944 aa7.46□□□□□ -1.22
Shroom3-211ENSMUST00000225438 Zfhx4Q9JJN2 3550 aa7.45□□□□□ -1.22
Shroom3-211ENSMUST00000225438 Krtap8-1O08633 61 aa7.44□□□□□ -1.22
Shroom3-211ENSMUST00000225438 Krtap1-5A2A590 122 aa7.43□□□□□ -1.22
Shroom3-211ENSMUST00000225438 Krtap19-9aF8WH65 55 aa7.41□□□□□ -1.22
Shroom3-211ENSMUST00000225438 Sprr2a3Q4KL71 83 aa7.38□□□□□ -1.23
Shroom3-211ENSMUST00000225438 Sprr2a1Q9CQK8 83 aa7.38□□□□□ -1.23
Shroom3-211ENSMUST00000225438 Krtap7-1Q9D3I6 87 aa7.38□□□□□ -1.23
Shroom3-211ENSMUST00000225438 Ank2Q8C8R3 3898 aa7.32□□□□□ -1.24
Shroom3-211ENSMUST00000225438 Sprr2kO70562 68 aa7.3□□□□□ -1.24
Shroom3-211ENSMUST00000225438 Cmya5Q70KF4 3739 aa7.28□□□□□ -1.24
Shroom3-211ENSMUST00000225438 Muc6Q80T03 2850 aa7.25□□□□□ -1.25
Shroom3-211ENSMUST00000225438 Krtap1-4Q3V2D6 188 aa7.25□□□□□ -1.25
Shroom3-211ENSMUST00000225438 Svep1A2AVA0 3567 aa7.23□□□□□ -1.25
Shroom3-211ENSMUST00000225438 Gm18596A0A1W2P860 280 aa7.22□□□□□ -1.25
Shroom3-211ENSMUST00000225438 Krtap19-9bQ99NG9 58 aa7.2□□□□□ -1.26
Shroom3-211ENSMUST00000225438 LorP18165 486 aa7.2□□□□□ -1.26
Shroom3-211ENSMUST00000225438 Muc4Q8JZM8 3443 aa7.05□□□□□ -1.28
Shroom3-211ENSMUST00000225438 Dnah14A0A140LIJ4 4489 aa7.04□□□□□ -1.28
Shroom3-211ENSMUST00000225438 Krtap12-1Q9Z287 130 aa7.04□□□□□ -1.28
Shroom3-211ENSMUST00000225438 Huwe1Q7TMY8 4377 aaKnown RBP7.02□□□□□ -1.29
Shroom3-211ENSMUST00000225438 Gm19402J3QJV4 266 aa7.01□□□□□ -1.29
Shroom3-211ENSMUST00000225438 Dnah5Q8VHE6 4621 aa6.97□□□□□ -1.29
Shroom3-211ENSMUST00000225438 Csmd2V9GX34 3611 aa6.93□□□□□ -1.3
Shroom3-211ENSMUST00000225438 Sprr2gO70558 76 aa6.93□□□□□ -1.3
Shroom3-211ENSMUST00000225438 Dnah10D3YYQ8 4591 aa6.93□□□□□ -1.3
Shroom3-211ENSMUST00000225438 Stard9Q80TF6 4561 aa6.91□□□□□ -1.3
Shroom3-211ENSMUST00000225438 Vps13dB1ART2 4390 aa6.81□□□□□ -1.32
Shroom3-211ENSMUST00000225438 LystP97412 3788 aa6.78□□□□□ -1.32
Shroom3-211ENSMUST00000225438 PlecQ9QXS1 4691 aaKnown RBP6.77□□□□□ -1.33
Shroom3-211ENSMUST00000225438 Lce3bQ9CQM7 98 aa6.63□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms