RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 AtmQ62388 3066 aa9.06□□□□□ -0.96
Ptpre-207ENSMUST00000211140 Zfhx3Q61329 3726 aa9.02□□□□□ -0.97
Ptpre-207ENSMUST00000211140 Celsr3Q91ZI0 3301 aa8.99□□□□□ -0.97
Ptpre-207ENSMUST00000211140 B930094E09RikQ8C4T2 136 aa8.96□□□□□ -0.98
Ptpre-207ENSMUST00000211140 Adgrg4B7ZCC9 3073 aa8.96□□□□□ -0.98
Ptpre-207ENSMUST00000211140 A930033H14RikG5E8X6 103 aa8.95□□□□□ -0.98
Ptpre-207ENSMUST00000211140 Zzef1Q5SSH7 2924 aa8.94□□□□□ -0.98
Ptpre-207ENSMUST00000211140 Lrrc37aB1AWG4 3215 aa8.92□□□□□ -0.98
Ptpre-207ENSMUST00000211140 Wdfy4E9Q2M9 3149 aa8.9□□□□□ -0.98
Ptpre-207ENSMUST00000211140 2310079G19RikQ9D6L6 185 aa8.9□□□□□ -0.98
Ptpre-207ENSMUST00000211140 DspE9Q557 2883 aaKnown RBP8.9□□□□□ -0.98
Ptpre-207ENSMUST00000211140 Szt2A2A9C3 3431 aa8.9□□□□□ -0.99
Ptpre-207ENSMUST00000211140 Igfn1Q3KNY0 2849 aa8.89□□□□□ -0.99
Ptpre-207ENSMUST00000211140 FrylF8VQ05 3007 aa8.84□□□□□ -0.99
Ptpre-207ENSMUST00000211140 FryE9Q8I9 3020 aa8.84□□□□□ -0.99
Ptpre-207ENSMUST00000211140 NbeaQ9EPN1 2936 aa8.82□□□□□ -1
Ptpre-207ENSMUST00000211140 Lama1P19137 3084 aa8.81□□□□□ -1
Ptpre-207ENSMUST00000211140 Dmxl2Q8BPN8 3032 aa8.76□□□□□ -1.01
Ptpre-207ENSMUST00000211140 Celsr2Q9R0M0 2920 aa8.75□□□□□ -1.01
Ptpre-207ENSMUST00000211140 Pdzd2E9Q1M1 2796 aa8.72□□□□□ -1.01
Ptpre-207ENSMUST00000211140 Brca2P97929 3329 aa8.71□□□□□ -1.02
Ptpre-207ENSMUST00000211140 Tenm4Q3UHK6 2771 aa8.71□□□□□ -1.02
Ptpre-207ENSMUST00000211140 FlncQ8VHX6 2726 aaKnown RBP8.68□□□□□ -1.02
Ptpre-207ENSMUST00000211140 Gm17416Q30KP4 66 aa8.65□□□□□ -1.02
Ptpre-207ENSMUST00000211140 Dchs2A0A0A6YW72 3346 aa8.65□□□□□ -1.03
Ptpre-207ENSMUST00000211140 LrbaQ9ESE1 2856 aa8.61□□□□□ -1.03
Ptpre-207ENSMUST00000211140 Tenm3Q9WTS6 2715 aa8.61□□□□□ -1.03
Ptpre-207ENSMUST00000211140 Chd9Q8BYH8 2885 aa8.57□□□□□ -1.04
Ptpre-207ENSMUST00000211140 Prm2P07978 107 aa8.56□□□□□ -1.04
Ptpre-207ENSMUST00000211140 Gm9736A0A1W2P7N1 277 aa8.55□□□□□ -1.04
Ptpre-207ENSMUST00000211140 2210017I01RikA0A0A6YVV1 95 aa8.53□□□□□ -1.04
Ptpre-207ENSMUST00000211140 Trank1Q8BV79 2999 aa8.53□□□□□ -1.04
Ptpre-207ENSMUST00000211140 Nf1Q04690 2841 aa8.52□□□□□ -1.05
Ptpre-207ENSMUST00000211140 Gm17402F6Z0L5 76 aa8.48□□□□□ -1.05
Ptpre-207ENSMUST00000211140 Col6a3E9PWQ3 3284 aa8.45□□□□□ -1.06
Ptpre-207ENSMUST00000211140 Tenm1Q9WTS4 2731 aa8.42□□□□□ -1.06
Ptpre-207ENSMUST00000211140 Helz2E9QAM5 2947 aaKnown RBP8.35□□□□□ -1.07
Ptpre-207ENSMUST00000211140 Gm9918Q8BUR5 174 aa8.34□□□□□ -1.07
Ptpre-207ENSMUST00000211140 SpegQ62407 3262 aa8.32□□□□□ -1.08
Ptpre-207ENSMUST00000211140 Tenm2Q9WTS5 2764 aa8.3□□□□□ -1.08
Ptpre-207ENSMUST00000211140 Dchs1E9PVD3 3291 aa8.3□□□□□ -1.08
Ptpre-207ENSMUST00000211140 Vps13cQ8BX70 3748 aa8.3□□□□□ -1.08
Ptpre-207ENSMUST00000211140 VcanQ62059 3357 aa8.28□□□□□ -1.08
Ptpre-207ENSMUST00000211140 Gm11939A2A592 99 aa8.2□□□□□ -1.1
Ptpre-207ENSMUST00000211140 Gm10318A0A1W2P728 225 aa8.19□□□□□ -1.1
Ptpre-207ENSMUST00000211140 Gm19668J3QMD1 248 aa8.18□□□□□ -1.1
Ptpre-207ENSMUST00000211140 RelnQ60841 3461 aa8.18□□□□□ -1.1
Ptpre-207ENSMUST00000211140 Myo15aQ9QZZ4 3511 aa8.17□□□□□ -1.1
Ptpre-207ENSMUST00000211140 Akap9Q70FJ1 3797 aa8.14□□□□□ -1.11
Ptpre-207ENSMUST00000211140 Wdfy3Q6VNB8 3508 aa8.14□□□□□ -1.11
Ptpre-207ENSMUST00000211140 Megf8P60882 2789 aa8.12□□□□□ -1.11
Ptpre-207ENSMUST00000211140 Krtap13-1Q8K198 168 aa8.07□□□□□ -1.12
Ptpre-207ENSMUST00000211140 Muc5acE9QAQ8 3455 aa8.06□□□□□ -1.12
Ptpre-207ENSMUST00000211140 4933428G20RikQ9D3X4 101 aa8.06□□□□□ -1.12
Ptpre-207ENSMUST00000211140 Krtap19-5O08632 62 aa7.98□□□□□ -1.13
Ptpre-207ENSMUST00000211140 DmdP11531 3678 aa7.98□□□□□ -1.13
Ptpre-207ENSMUST00000211140 Krtap3-2Q9D638 99 aa7.96□□□□□ -1.13
Ptpre-207ENSMUST00000211140 Krtap3-3Q9D7P0 99 aa7.96□□□□□ -1.13
Ptpre-207ENSMUST00000211140 Krtap3-1A2A591 98 aa7.95□□□□□ -1.14
Ptpre-207ENSMUST00000211140 Crct1Q6PAI5 102 aa7.93□□□□□ -1.14
Ptpre-207ENSMUST00000211140 Csmd1Q923L3 3564 aa7.93□□□□□ -1.14
Ptpre-207ENSMUST00000211140 OtogO55225 2910 aa7.9□□□□□ -1.14
Ptpre-207ENSMUST00000211140 VwfQ8CIZ8 2813 aa7.86□□□□□ -1.15
Ptpre-207ENSMUST00000211140 Smg1Q8BKX6 3658 aaKnown RBP7.67□□□□□ -1.18
Ptpre-207ENSMUST00000211140 Fbn1Q61554 2873 aaKnown RBP7.63□□□□□ -1.19
Ptpre-207ENSMUST00000211140 Zfhx4Q9JJN2 3550 aa7.62□□□□□ -1.19
Ptpre-207ENSMUST00000211140 Lama5Q61001 3718 aa7.57□□□□□ -1.2
Ptpre-207ENSMUST00000211140 Gm884A2A9H6 3643 aa7.5□□□□□ -1.21
Ptpre-207ENSMUST00000211140 Ank2Q8C8R3 3898 aa7.5□□□□□ -1.21
Ptpre-207ENSMUST00000211140 SpenQ62504 3644 aaKnown RBP7.5□□□□□ -1.21
Ptpre-207ENSMUST00000211140 Gm6358A0A087WPH4 74 aa7.41□□□□□ -1.22
Ptpre-207ENSMUST00000211140 Sprr2a3Q4KL71 83 aa7.4□□□□□ -1.23
Ptpre-207ENSMUST00000211140 Sprr2a1Q9CQK8 83 aa7.4□□□□□ -1.23
Ptpre-207ENSMUST00000211140 Cmya5Q70KF4 3739 aa7.39□□□□□ -1.23
Ptpre-207ENSMUST00000211140 Krtap1-5A2A590 122 aa7.37□□□□□ -1.23
Ptpre-207ENSMUST00000211140 Col7a1Q63870 2944 aa7.37□□□□□ -1.23
Ptpre-207ENSMUST00000211140 Krtap7-1Q9D3I6 87 aa7.36□□□□□ -1.23
Ptpre-207ENSMUST00000211140 Huwe1Q7TMY8 4377 aaKnown RBP7.29□□□□□ -1.24
Ptpre-207ENSMUST00000211140 Krtap19-9aF8WH65 55 aa7.26□□□□□ -1.25
Ptpre-207ENSMUST00000211140 Dnah14A0A140LIJ4 4489 aa7.2□□□□□ -1.26
Ptpre-207ENSMUST00000211140 Svep1A2AVA0 3567 aa7.2□□□□□ -1.26
Ptpre-207ENSMUST00000211140 Krtap1-4Q3V2D6 188 aa7.17□□□□□ -1.26
Ptpre-207ENSMUST00000211140 Muc6Q80T03 2850 aa7.17□□□□□ -1.26
Ptpre-207ENSMUST00000211140 Krtap8-1O08633 61 aa7.13□□□□□ -1.27
Ptpre-207ENSMUST00000211140 Dnah10D3YYQ8 4591 aa7.1□□□□□ -1.27
Ptpre-207ENSMUST00000211140 Krtap19-9bQ99NG9 58 aa7.09□□□□□ -1.27
Ptpre-207ENSMUST00000211140 Gm19402J3QJV4 266 aa7.06□□□□□ -1.28
Ptpre-207ENSMUST00000211140 Dnah5Q8VHE6 4621 aa7.04□□□□□ -1.28
Ptpre-207ENSMUST00000211140 Csmd2V9GX34 3611 aa7.03□□□□□ -1.28
Ptpre-207ENSMUST00000211140 LorP18165 486 aa7□□□□□ -1.29
Ptpre-207ENSMUST00000211140 LystP97412 3788 aa6.95□□□□□ -1.3
Ptpre-207ENSMUST00000211140 Muc4Q8JZM8 3443 aa6.95□□□□□ -1.3
Ptpre-207ENSMUST00000211140 Stard9Q80TF6 4561 aa6.92□□□□□ -1.3
Ptpre-207ENSMUST00000211140 Krtap12-1Q9Z287 130 aa6.91□□□□□ -1.3
Ptpre-207ENSMUST00000211140 Vps13dB1ART2 4390 aa6.88□□□□□ -1.31
Ptpre-207ENSMUST00000211140 Sprr2kO70562 68 aa6.87□□□□□ -1.31
Ptpre-207ENSMUST00000211140 Gm18596A0A1W2P860 280 aa6.84□□□□□ -1.31
Ptpre-207ENSMUST00000211140 Dnah17Q69Z23 4481 aa6.84□□□□□ -1.31
Ptpre-207ENSMUST00000211140 PlecQ9QXS1 4691 aaKnown RBP6.81□□□□□ -1.32
Ptpre-207ENSMUST00000211140 Hspg2Q05793 3707 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 85.1 ms