RNA–Protein interactions for RNA: ENSMUST00000175975.8

Cux1-204, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 10,945 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-204ENSMUST00000175975 NbeaQ9EPN1 2936 aa6.34□□□□□ -1.39
Cux1-204ENSMUST00000175975 Gm9508A0A1W2P7W0 230 aa6.34□□□□□ -1.39
Cux1-204ENSMUST00000175975 Celsr2Q9R0M0 2920 aa6.34□□□□□ -1.39
Cux1-204ENSMUST00000175975 Tenm3Q9WTS6 2715 aa6.33□□□□□ -1.4
Cux1-204ENSMUST00000175975 SmcpP15265 143 aa6.28□□□□□ -1.4
Cux1-204ENSMUST00000175975 Frem2Q6NVD0 3160 aa6.26□□□□□ -1.41
Cux1-204ENSMUST00000175975 Celsr1O35161 3034 aa6.24□□□□□ -1.41
Cux1-204ENSMUST00000175975 AspmQ8CJ27 3122 aa6.23□□□□□ -1.41
Cux1-204ENSMUST00000175975 Col12a1Q60847 3120 aa6.22□□□□□ -1.41
Cux1-204ENSMUST00000175975 2310061N02RikQ9D6S9 174 aa6.22□□□□□ -1.41
Cux1-204ENSMUST00000175975 B930094E09RikQ8C4T2 136 aa6.21□□□□□ -1.41
Cux1-204ENSMUST00000175975 HttP42859 3119 aa6.18□□□□□ -1.42
Cux1-204ENSMUST00000175975 Gm36176A0A1W2P8D5 158 aa6.18□□□□□ -1.42
Cux1-204ENSMUST00000175975 Gm17402F6Z0L5 76 aa6.17□□□□□ -1.42
Cux1-204ENSMUST00000175975 4933428G20RikQ9D3X4 101 aa6.14□□□□□ -1.43
Cux1-204ENSMUST00000175975 A930033H14RikG5E8X6 103 aa6.12□□□□□ -1.43
Cux1-204ENSMUST00000175975 Adgrg4B7ZCC9 3073 aa6.11□□□□□ -1.43
Cux1-204ENSMUST00000175975 Gm20537G3UYK7 97 aa6.11□□□□□ -1.43
Cux1-204ENSMUST00000175975 Celsr3Q91ZI0 3301 aa6.11□□□□□ -1.43
Cux1-204ENSMUST00000175975 Tenm4Q3UHK6 2771 aa6.1□□□□□ -1.43
Cux1-204ENSMUST00000175975 Lrrc37aB1AWG4 3215 aa6.09□□□□□ -1.44
Cux1-204ENSMUST00000175975 Gm5965D3Z724 196 aa6.08□□□□□ -1.44
Cux1-204ENSMUST00000175975 VwfQ8CIZ8 2813 aa6.08□□□□□ -1.44
Cux1-204ENSMUST00000175975 Myo15aQ9QZZ4 3511 aa6.07□□□□□ -1.44
Cux1-204ENSMUST00000175975 Gm17416Q30KP4 66 aa6.03□□□□□ -1.44
Cux1-204ENSMUST00000175975 Tenm2Q9WTS5 2764 aa6.02□□□□□ -1.45
Cux1-204ENSMUST00000175975 2310057N15RikQ9D6T8 200 aa5.99□□□□□ -1.45
Cux1-204ENSMUST00000175975 Cdh23Q99PF4 3354 aa5.96□□□□□ -1.45
Cux1-204ENSMUST00000175975 Gm9507D3Z5T3 223 aa5.96□□□□□ -1.46
Cux1-204ENSMUST00000175975 Zfhx3Q61329 3726 aa5.95□□□□□ -1.46
Cux1-204ENSMUST00000175975 Helz2E9QAM5 2947 aaKnown RBP5.93□□□□□ -1.46
Cux1-204ENSMUST00000175975 Prm2P07978 107 aa5.9□□□□□ -1.47
Cux1-204ENSMUST00000175975 Akap9Q70FJ1 3797 aa5.87□□□□□ -1.47
Cux1-204ENSMUST00000175975 Brca2P97929 3329 aa5.85□□□□□ -1.47
Cux1-204ENSMUST00000175975 2210017I01RikA0A0A6YVV1 95 aa5.84□□□□□ -1.47
Cux1-204ENSMUST00000175975 Dchs2A0A0A6YW72 3346 aa5.84□□□□□ -1.47
Cux1-204ENSMUST00000175975 Szt2A2A9C3 3431 aa5.83□□□□□ -1.48
Cux1-204ENSMUST00000175975 Krtap10-4Q08EG8 221 aa5.83□□□□□ -1.48
Cux1-204ENSMUST00000175975 2310079G19RikQ9D6L6 185 aa5.82□□□□□ -1.48
Cux1-204ENSMUST00000175975 OtogO55225 2910 aa5.8□□□□□ -1.48
Cux1-204ENSMUST00000175975 Col6a3E9PWQ3 3284 aa5.8□□□□□ -1.48
Cux1-204ENSMUST00000175975 SpegQ62407 3262 aa5.78□□□□□ -1.48
Cux1-204ENSMUST00000175975 Krtap10-10A0A1W2P7T6 217 aa5.76□□□□□ -1.49
Cux1-204ENSMUST00000175975 Gm19668J3QMD1 248 aa5.73□□□□□ -1.49
Cux1-204ENSMUST00000175975 DmdP11531 3678 aa5.71□□□□□ -1.5
Cux1-204ENSMUST00000175975 Gm2696A0A1W2P709 240 aa5.67□□□□□ -1.5
Cux1-204ENSMUST00000175975 Fbn1Q61554 2873 aaKnown RBP5.67□□□□□ -1.5
Cux1-204ENSMUST00000175975 Col7a1Q63870 2944 aa5.65□□□□□ -1.5
Cux1-204ENSMUST00000175975 VcanQ62059 3357 aa5.65□□□□□ -1.5
Cux1-204ENSMUST00000175975 Vps13cQ8BX70 3748 aa5.61□□□□□ -1.51
Cux1-204ENSMUST00000175975 Ank2Q8C8R3 3898 aa5.56□□□□□ -1.52
Cux1-204ENSMUST00000175975 Dchs1E9PVD3 3291 aa5.54□□□□□ -1.52
Cux1-204ENSMUST00000175975 Cmya5Q70KF4 3739 aa5.5□□□□□ -1.53
Cux1-204ENSMUST00000175975 Gm9918Q8BUR5 174 aa5.48□□□□□ -1.53
Cux1-204ENSMUST00000175975 Wdfy3Q6VNB8 3508 aa5.48□□□□□ -1.53
Cux1-204ENSMUST00000175975 SpenQ62504 3644 aaKnown RBP5.47□□□□□ -1.53
Cux1-204ENSMUST00000175975 Smg1Q8BKX6 3658 aaKnown RBP5.42□□□□□ -1.54
Cux1-204ENSMUST00000175975 Muc5acE9QAQ8 3455 aa5.39□□□□□ -1.55
Cux1-204ENSMUST00000175975 BsnO88737 3942 aa5.29□□□□□ -1.56
Cux1-204ENSMUST00000175975 RelnQ60841 3461 aa5.28□□□□□ -1.56
Cux1-204ENSMUST00000175975 Muc6Q80T03 2850 aa5.26□□□□□ -1.57
Cux1-204ENSMUST00000175975 Krtap13-1Q8K198 168 aa5.25□□□□□ -1.57
Cux1-204ENSMUST00000175975 Zfhx4Q9JJN2 3550 aa5.21□□□□□ -1.58
Cux1-204ENSMUST00000175975 Lama5Q61001 3718 aa5.19□□□□□ -1.58
Cux1-204ENSMUST00000175975 Gm10318A0A1W2P728 225 aa5.17□□□□□ -1.58
Cux1-204ENSMUST00000175975 Csmd1Q923L3 3564 aa5.17□□□□□ -1.58
Cux1-204ENSMUST00000175975 Gm9736A0A1W2P7N1 277 aa5.14□□□□□ -1.59
Cux1-204ENSMUST00000175975 Gm11939A2A592 99 aa5.13□□□□□ -1.59
Cux1-204ENSMUST00000175975 Gm6358A0A087WPH4 74 aa5.11□□□□□ -1.59
Cux1-204ENSMUST00000175975 Csmd2V9GX34 3611 aa5.1□□□□□ -1.59
Cux1-204ENSMUST00000175975 Muc4Q8JZM8 3443 aa5.08□□□□□ -1.6
Cux1-204ENSMUST00000175975 Krtap3-1A2A591 98 aa5.08□□□□□ -1.6
Cux1-204ENSMUST00000175975 Krtap8-1O08633 61 aa5.04□□□□□ -1.6
Cux1-204ENSMUST00000175975 Gm18596A0A1W2P860 280 aa5.04□□□□□ -1.6
Cux1-204ENSMUST00000175975 Gm884A2A9H6 3643 aa5.03□□□□□ -1.6
Cux1-204ENSMUST00000175975 Krtap19-5O08632 62 aa4.99□□□□□ -1.61
Cux1-204ENSMUST00000175975 Krtap19-9aF8WH65 55 aa4.99□□□□□ -1.61
Cux1-204ENSMUST00000175975 Sprr2kO70562 68 aa4.98□□□□□ -1.61
Cux1-204ENSMUST00000175975 Crct1Q6PAI5 102 aa4.95□□□□□ -1.62
Cux1-204ENSMUST00000175975 Krtap7-1Q9D3I6 87 aa4.94□□□□□ -1.62
Cux1-204ENSMUST00000175975 Krtap19-9bQ99NG9 58 aa4.93□□□□□ -1.62
Cux1-204ENSMUST00000175975 LystP97412 3788 aa4.91□□□□□ -1.62
Cux1-204ENSMUST00000175975 Sprr2gO70558 76 aa4.91□□□□□ -1.62
Cux1-204ENSMUST00000175975 Gm19402J3QJV4 266 aa4.9□□□□□ -1.62
Cux1-204ENSMUST00000175975 Sprr2a3Q4KL71 83 aa4.89□□□□□ -1.63
Cux1-204ENSMUST00000175975 Sprr2a1Q9CQK8 83 aa4.89□□□□□ -1.63
Cux1-204ENSMUST00000175975 Krtap3-2Q9D638 99 aa4.89□□□□□ -1.63
Cux1-204ENSMUST00000175975 Krtap3-3Q9D7P0 99 aa4.89□□□□□ -1.63
Cux1-204ENSMUST00000175975 Xirp2Q4U4S6 3784 aa4.86□□□□□ -1.63
Cux1-204ENSMUST00000175975 Csmd3Q80T79 3707 aa4.86□□□□□ -1.63
Cux1-204ENSMUST00000175975 Krtap1-5A2A590 122 aa4.84□□□□□ -1.64
Cux1-204ENSMUST00000175975 Hspg2Q05793 3707 aaKnown RBP4.76□□□□□ -1.65
Cux1-204ENSMUST00000175975 Krtap12-1Q9Z287 130 aa4.73□□□□□ -1.65
Cux1-204ENSMUST00000175975 Dnah3Q8BW94 4083 aa4.7□□□□□ -1.66
Cux1-204ENSMUST00000175975 Dnah7bL7N1Y0 4068 aa4.69□□□□□ -1.66
Cux1-204ENSMUST00000175975 Svep1A2AVA0 3567 aa4.66□□□□□ -1.66
Cux1-204ENSMUST00000175975 Krtap1-4Q3V2D6 188 aa4.64□□□□□ -1.67
Cux1-204ENSMUST00000175975 Dnah7cA0A087WR13 4024 aa4.63□□□□□ -1.67
Cux1-204ENSMUST00000175975 CubnQ9JLB4 3623 aa4.6□□□□□ -1.67
Cux1-204ENSMUST00000175975 Vps13bQ80TY5 3993 aa4.59□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 57.6 ms