RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Brca2P97929 3329 aa3.49□□□□□ -1.85
Ubr4-212ENSMUST00000165860 Szt2A2A9C3 3431 aa3.49□□□□□ -1.85
Ubr4-212ENSMUST00000165860 Celsr1O35161 3034 aa3.48□□□□□ -1.85
Ubr4-212ENSMUST00000165860 BC029722A0A0N4SW31 51 aa3.48□□□□□ -1.85
Ubr4-212ENSMUST00000165860 2310050C09RikG5E8Z3 280 aa3.47□□□□□ -1.85
Ubr4-212ENSMUST00000165860 Dmxl2Q8BPN8 3032 aa3.46□□□□□ -1.86
Ubr4-212ENSMUST00000165860 LrbaQ9ESE1 2856 aa3.45□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Rps29P62274 56 aa3.44□□□□□ -1.86
Ubr4-212ENSMUST00000165860 D6Ertd527eA0A0N4SWI3 464 aa3.44□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Gm20537G3UYK7 97 aa3.43□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Tenm4Q3UHK6 2771 aa3.43□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Krtap29-1A2A5X4 342 aa3.43□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Tnp1P10856 55 aa3.43□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Lama1P19137 3084 aa3.43□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Tenm3Q9WTS6 2715 aa3.42□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Gm5767A0A0J9YTU8 78 aa3.41□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Dchs2A0A0A6YW72 3346 aa3.41□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Gm17349F7BGH6 99 aa3.41□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Lrrc37aB1AWG4 3215 aa3.4□□□□□ -1.86
Ubr4-212ENSMUST00000165860 Col6a3E9PWQ3 3284 aa3.39□□□□□ -1.87
Ubr4-212ENSMUST00000165860 Helz2E9QAM5 2947 aaKnown RBP3.38□□□□□ -1.87
Ubr4-212ENSMUST00000165860 Wdfy4E9Q2M9 3149 aa3.37□□□□□ -1.87
Ubr4-212ENSMUST00000165860 Adgrg4B7ZCC9 3073 aa3.35□□□□□ -1.87
Ubr4-212ENSMUST00000165860 VcanQ62059 3357 aa3.35□□□□□ -1.87
Ubr4-212ENSMUST00000165860 A930033H14RikG5E8X6 103 aa3.34□□□□□ -1.88
Ubr4-212ENSMUST00000165860 Tnp2P11378 117 aa3.34□□□□□ -1.88
Ubr4-212ENSMUST00000165860 Gm17402F6Z0L5 76 aa3.31□□□□□ -1.88
Ubr4-212ENSMUST00000165860 Gm36176A0A1W2P8D5 158 aa3.31□□□□□ -1.88
Ubr4-212ENSMUST00000165860 SpegQ62407 3262 aa3.31□□□□□ -1.88
Ubr4-212ENSMUST00000165860 Ank2Q8C8R3 3898 aa3.3□□□□□ -1.88
Ubr4-212ENSMUST00000165860 DmdP11531 3678 aa3.3□□□□□ -1.88
Ubr4-212ENSMUST00000165860 2310061N02RikQ9D6S9 174 aa3.3□□□□□ -1.88
Ubr4-212ENSMUST00000165860 2310079G19RikQ9D6L6 185 aa3.29□□□□□ -1.88
Ubr4-212ENSMUST00000165860 Dchs1E9PVD3 3291 aa3.28□□□□□ -1.88
Ubr4-212ENSMUST00000165860 Myo15aQ9QZZ4 3511 aa3.27□□□□□ -1.89
Ubr4-212ENSMUST00000165860 Wdfy3Q6VNB8 3508 aa3.27□□□□□ -1.89
Ubr4-212ENSMUST00000165860 B930094E09RikQ8C4T2 136 aa3.26□□□□□ -1.89
Ubr4-212ENSMUST00000165860 Gm9507D3Z5T3 223 aa3.25□□□□□ -1.89
Ubr4-212ENSMUST00000165860 Megf8P60882 2789 aa3.25□□□□□ -1.89
Ubr4-212ENSMUST00000165860 VwfQ8CIZ8 2813 aa3.23□□□□□ -1.89
Ubr4-212ENSMUST00000165860 Krtap10-4Q08EG8 221 aa3.23□□□□□ -1.89
Ubr4-212ENSMUST00000165860 RelnQ60841 3461 aa3.23□□□□□ -1.89
Ubr4-212ENSMUST00000165860 Zfhx3Q61329 3726 aa3.23□□□□□ -1.89
Ubr4-212ENSMUST00000165860 Csmd1Q923L3 3564 aa3.23□□□□□ -1.89
Ubr4-212ENSMUST00000165860 Krtap10-10A0A1W2P7T6 217 aa3.22□□□□□ -1.89
Ubr4-212ENSMUST00000165860 OtogO55225 2910 aa3.2□□□□□ -1.9
Ubr4-212ENSMUST00000165860 Tenm2Q9WTS5 2764 aa3.18□□□□□ -1.9
Ubr4-212ENSMUST00000165860 Col7a1Q63870 2944 aa3.16□□□□□ -1.9
Ubr4-212ENSMUST00000165860 Akap9Q70FJ1 3797 aa3.15□□□□□ -1.91
Ubr4-212ENSMUST00000165860 SpenQ62504 3644 aaKnown RBP3.15□□□□□ -1.91
Ubr4-212ENSMUST00000165860 Fbn1Q61554 2873 aaKnown RBP3.11□□□□□ -1.91
Ubr4-212ENSMUST00000165860 Muc5acE9QAQ8 3455 aa3.11□□□□□ -1.91
Ubr4-212ENSMUST00000165860 4933428G20RikQ9D3X4 101 aa3.1□□□□□ -1.91
Ubr4-212ENSMUST00000165860 Vps13cQ8BX70 3748 aa3.09□□□□□ -1.91
Ubr4-212ENSMUST00000165860 Gm2696A0A1W2P709 240 aa3.09□□□□□ -1.91
Ubr4-212ENSMUST00000165860 Zfhx4Q9JJN2 3550 aa3.09□□□□□ -1.91
Ubr4-212ENSMUST00000165860 Gm9918Q8BUR5 174 aa3.08□□□□□ -1.92
Ubr4-212ENSMUST00000165860 Muc6Q80T03 2850 aa3.07□□□□□ -1.92
Ubr4-212ENSMUST00000165860 Smg1Q8BKX6 3658 aaKnown RBP3.04□□□□□ -1.92
Ubr4-212ENSMUST00000165860 Gm884A2A9H6 3643 aa3.04□□□□□ -1.92
Ubr4-212ENSMUST00000165860 Krtap7-1Q9D3I6 87 aa3.01□□□□□ -1.93
Ubr4-212ENSMUST00000165860 2210017I01RikA0A0A6YVV1 95 aa2.97□□□□□ -1.93
Ubr4-212ENSMUST00000165860 Lama5Q61001 3718 aa2.97□□□□□ -1.93
Ubr4-212ENSMUST00000165860 Krtap3-2Q9D638 99 aa2.96□□□□□ -1.94
Ubr4-212ENSMUST00000165860 Krtap3-3Q9D7P0 99 aa2.96□□□□□ -1.94
Ubr4-212ENSMUST00000165860 Krtap13-1Q8K198 168 aa2.93□□□□□ -1.94
Ubr4-212ENSMUST00000165860 Dnah6E9Q0B6 4144 aa2.92□□□□□ -1.94
Ubr4-212ENSMUST00000165860 Cmya5Q70KF4 3739 aa2.91□□□□□ -1.94
Ubr4-212ENSMUST00000165860 Svep1A2AVA0 3567 aa2.91□□□□□ -1.94
Ubr4-212ENSMUST00000165860 Muc4Q8JZM8 3443 aa2.9□□□□□ -1.95
Ubr4-212ENSMUST00000165860 Gm11939A2A592 99 aa2.89□□□□□ -1.95
Ubr4-212ENSMUST00000165860 Dnah3Q8BW94 4083 aa2.87□□□□□ -1.95
Ubr4-212ENSMUST00000165860 Krtap3-1A2A591 98 aa2.86□□□□□ -1.95
Ubr4-212ENSMUST00000165860 Gm19668J3QMD1 248 aa2.84□□□□□ -1.96
Ubr4-212ENSMUST00000165860 Huwe1Q7TMY8 4377 aaKnown RBP2.83□□□□□ -1.96
Ubr4-212ENSMUST00000165860 Gm10318A0A1W2P728 225 aa2.83□□□□□ -1.96
Ubr4-212ENSMUST00000165860 Gm9736A0A1W2P7N1 277 aa2.83□□□□□ -1.96
Ubr4-212ENSMUST00000165860 Dnah7bL7N1Y0 4068 aa2.81□□□□□ -1.96
Ubr4-212ENSMUST00000165860 Fras1Q80T14 4010 aa2.81□□□□□ -1.96
Ubr4-212ENSMUST00000165860 LystP97412 3788 aa2.8□□□□□ -1.96
Ubr4-212ENSMUST00000165860 BsnO88737 3942 aa2.8□□□□□ -1.96
Ubr4-212ENSMUST00000165860 Dnah7cA0A087WR13 4024 aa2.8□□□□□ -1.96
Ubr4-212ENSMUST00000165860 PrkdcP97313 4128 aa2.79□□□□□ -1.96
Ubr4-212ENSMUST00000165860 Vps13dB1ART2 4390 aa2.78□□□□□ -1.96
Ubr4-212ENSMUST00000165860 Gm6358A0A087WPH4 74 aa2.77□□□□□ -1.97
Ubr4-212ENSMUST00000165860 Dnah7aE9Q0T8 4024 aa2.77□□□□□ -1.97
Ubr4-212ENSMUST00000165860 TnxbO35452 4006 aa2.74□□□□□ -1.97
Ubr4-212ENSMUST00000165860 Csmd2V9GX34 3611 aa2.73□□□□□ -1.97
Ubr4-212ENSMUST00000165860 Crct1Q6PAI5 102 aa2.71□□□□□ -1.98
Ubr4-212ENSMUST00000165860 CubnQ9JLB4 3623 aa2.7□□□□□ -1.98
Ubr4-212ENSMUST00000165860 Ryr1E9PZQ0 5035 aa2.67□□□□□ -1.98
Ubr4-212ENSMUST00000165860 Csmd3Q80T79 3707 aa2.67□□□□□ -1.98
Ubr4-212ENSMUST00000165860 Sprr2a3Q4KL71 83 aa2.66□□□□□ -1.98
Ubr4-212ENSMUST00000165860 Sprr2a1Q9CQK8 83 aa2.66□□□□□ -1.98
Ubr4-212ENSMUST00000165860 Dnah14A0A140LIJ4 4489 aa2.65□□□□□ -1.98
Ubr4-212ENSMUST00000165860 Sprr2kO70562 68 aa2.65□□□□□ -1.99
Ubr4-212ENSMUST00000165860 Dnah1E9Q8T7 4250 aa2.63□□□□□ -1.99
Ubr4-212ENSMUST00000165860 Xirp2Q4U4S6 3784 aa2.62□□□□□ -1.99
Ubr4-212ENSMUST00000165860 Dnah10D3YYQ8 4591 aa2.61□□□□□ -1.99
Ubr4-212ENSMUST00000165860 Gm19402J3QJV4 266 aa2.61□□□□□ -1.99
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms