RNA–Protein interactions for RNA: ENSMUST00000118242.7

Limch1-204, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Limch1, Length 5,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-204ENSMUST00000118242 Hivep1Q03172 2688 aa6.26□□□□□ -1.41
Limch1-204ENSMUST00000118242 Zzef1Q5SSH7 2924 aa6.25□□□□□ -1.41
Limch1-204ENSMUST00000118242 Celsr3Q91ZI0 3301 aa6.24□□□□□ -1.41
Limch1-204ENSMUST00000118242 AtmQ62388 3066 aa6.23□□□□□ -1.41
Limch1-204ENSMUST00000118242 FrylF8VQ05 3007 aa6.22□□□□□ -1.41
Limch1-204ENSMUST00000118242 Gm17416Q30KP4 66 aa6.22□□□□□ -1.41
Limch1-204ENSMUST00000118242 Muc2Q80Z19 2680 aa6.19□□□□□ -1.42
Limch1-204ENSMUST00000118242 Myo15bI7HPW8 3033 aa6.19□□□□□ -1.42
Limch1-204ENSMUST00000118242 Cdh23Q99PF4 3354 aa6.18□□□□□ -1.42
Limch1-204ENSMUST00000118242 FcgbpE9Q0B5 2583 aa6.18□□□□□ -1.42
Limch1-204ENSMUST00000118242 Adgrg4B7ZCC9 3073 aa6.16□□□□□ -1.42
Limch1-204ENSMUST00000118242 Lama1P19137 3084 aa6.14□□□□□ -1.43
Limch1-204ENSMUST00000118242 2210017I01RikA0A0A6YVV1 95 aa6.12□□□□□ -1.43
Limch1-204ENSMUST00000118242 Itpr2Q9Z329 2701 aa6.12□□□□□ -1.43
Limch1-204ENSMUST00000118242 AspmQ8CJ27 3122 aa6.11□□□□□ -1.43
Limch1-204ENSMUST00000118242 NbeaQ9EPN1 2936 aa6.1□□□□□ -1.43
Limch1-204ENSMUST00000118242 Gm2696A0A1W2P709 240 aa6.09□□□□□ -1.43
Limch1-204ENSMUST00000118242 Wdfy4E9Q2M9 3149 aa6.07□□□□□ -1.44
Limch1-204ENSMUST00000118242 Celsr2Q9R0M0 2920 aa6.05□□□□□ -1.44
Limch1-204ENSMUST00000118242 Lrrc37aB1AWG4 3215 aa6.02□□□□□ -1.45
Limch1-204ENSMUST00000118242 Zfhx3Q61329 3726 aa6□□□□□ -1.45
Limch1-204ENSMUST00000118242 LrbaQ9ESE1 2856 aa6□□□□□ -1.45
Limch1-204ENSMUST00000118242 Szt2A2A9C3 3431 aa6□□□□□ -1.45
Limch1-204ENSMUST00000118242 Dmxl2Q8BPN8 3032 aa6□□□□□ -1.45
Limch1-204ENSMUST00000118242 FlncQ8VHX6 2726 aaKnown RBP5.98□□□□□ -1.45
Limch1-204ENSMUST00000118242 Krtap3-2Q9D638 99 aa5.97□□□□□ -1.45
Limch1-204ENSMUST00000118242 Krtap3-3Q9D7P0 99 aa5.97□□□□□ -1.45
Limch1-204ENSMUST00000118242 Pdzd2E9Q1M1 2796 aa5.97□□□□□ -1.45
Limch1-204ENSMUST00000118242 Trank1Q8BV79 2999 aa5.95□□□□□ -1.46
Limch1-204ENSMUST00000118242 Nf1Q04690 2841 aa5.94□□□□□ -1.46
Limch1-204ENSMUST00000118242 Chd9Q8BYH8 2885 aa5.93□□□□□ -1.46
Limch1-204ENSMUST00000118242 Helz2E9QAM5 2947 aaKnown RBP5.93□□□□□ -1.46
Limch1-204ENSMUST00000118242 Tenm3Q9WTS6 2715 aa5.92□□□□□ -1.46
Limch1-204ENSMUST00000118242 Brca2P97929 3329 aa5.92□□□□□ -1.46
Limch1-204ENSMUST00000118242 Gm11939A2A592 99 aa5.91□□□□□ -1.46
Limch1-204ENSMUST00000118242 4933428G20RikQ9D3X4 101 aa5.88□□□□□ -1.47
Limch1-204ENSMUST00000118242 Dchs2A0A0A6YW72 3346 aa5.88□□□□□ -1.47
Limch1-204ENSMUST00000118242 SpegQ62407 3262 aa5.82□□□□□ -1.48
Limch1-204ENSMUST00000118242 Krtap3-1A2A591 98 aa5.81□□□□□ -1.48
Limch1-204ENSMUST00000118242 Krtap13-1Q8K198 168 aa5.81□□□□□ -1.48
Limch1-204ENSMUST00000118242 Gm19668J3QMD1 248 aa5.8□□□□□ -1.48
Limch1-204ENSMUST00000118242 Krtap7-1Q9D3I6 87 aa5.76□□□□□ -1.49
Limch1-204ENSMUST00000118242 Col6a3E9PWQ3 3284 aa5.75□□□□□ -1.49
Limch1-204ENSMUST00000118242 Gm9736A0A1W2P7N1 277 aa5.68□□□□□ -1.5
Limch1-204ENSMUST00000118242 Csmd1Q923L3 3564 aa5.64□□□□□ -1.51
Limch1-204ENSMUST00000118242 Megf8P60882 2789 aa5.64□□□□□ -1.51
Limch1-204ENSMUST00000118242 VcanQ62059 3357 aa5.63□□□□□ -1.51
Limch1-204ENSMUST00000118242 Tenm1Q9WTS4 2731 aa5.63□□□□□ -1.51
Limch1-204ENSMUST00000118242 Myo15aQ9QZZ4 3511 aa5.63□□□□□ -1.51
Limch1-204ENSMUST00000118242 RelnQ60841 3461 aa5.61□□□□□ -1.51
Limch1-204ENSMUST00000118242 Vps13cQ8BX70 3748 aa5.6□□□□□ -1.51
Limch1-204ENSMUST00000118242 Wdfy3Q6VNB8 3508 aa5.6□□□□□ -1.51
Limch1-204ENSMUST00000118242 Dchs1E9PVD3 3291 aa5.58□□□□□ -1.52
Limch1-204ENSMUST00000118242 Akap9Q70FJ1 3797 aa5.57□□□□□ -1.52
Limch1-204ENSMUST00000118242 Tenm4Q3UHK6 2771 aa5.55□□□□□ -1.52
Limch1-204ENSMUST00000118242 DmdP11531 3678 aa5.5□□□□□ -1.53
Limch1-204ENSMUST00000118242 OtogO55225 2910 aa5.5□□□□□ -1.53
Limch1-204ENSMUST00000118242 Tenm2Q9WTS5 2764 aa5.45□□□□□ -1.54
Limch1-204ENSMUST00000118242 Zfhx4Q9JJN2 3550 aa5.45□□□□□ -1.54
Limch1-204ENSMUST00000118242 Gm9918Q8BUR5 174 aa5.45□□□□□ -1.54
Limch1-204ENSMUST00000118242 Sprr2a3Q4KL71 83 aa5.44□□□□□ -1.54
Limch1-204ENSMUST00000118242 Sprr2a1Q9CQK8 83 aa5.44□□□□□ -1.54
Limch1-204ENSMUST00000118242 Muc5acE9QAQ8 3455 aa5.4□□□□□ -1.55
Limch1-204ENSMUST00000118242 SpenQ62504 3644 aaKnown RBP5.36□□□□□ -1.55
Limch1-204ENSMUST00000118242 Fbn1Q61554 2873 aaKnown RBP5.34□□□□□ -1.55
Limch1-204ENSMUST00000118242 Krtap19-5O08632 62 aa5.34□□□□□ -1.55
Limch1-204ENSMUST00000118242 Smg1Q8BKX6 3658 aaKnown RBP5.33□□□□□ -1.56
Limch1-204ENSMUST00000118242 VwfQ8CIZ8 2813 aa5.33□□□□□ -1.56
Limch1-204ENSMUST00000118242 Gm10318A0A1W2P728 225 aa5.3□□□□□ -1.56
Limch1-204ENSMUST00000118242 Krtap1-5A2A590 122 aa5.26□□□□□ -1.57
Limch1-204ENSMUST00000118242 Gm19402J3QJV4 266 aa5.17□□□□□ -1.58
Limch1-204ENSMUST00000118242 Gm884A2A9H6 3643 aa5.14□□□□□ -1.59
Limch1-204ENSMUST00000118242 Cmya5Q70KF4 3739 aa5.13□□□□□ -1.59
Limch1-204ENSMUST00000118242 Crct1Q6PAI5 102 aa5.13□□□□□ -1.59
Limch1-204ENSMUST00000118242 Lama5Q61001 3718 aa5.12□□□□□ -1.59
Limch1-204ENSMUST00000118242 Col7a1Q63870 2944 aa5.09□□□□□ -1.6
Limch1-204ENSMUST00000118242 Krtap19-9bQ99NG9 58 aa5.04□□□□□ -1.6
Limch1-204ENSMUST00000118242 Ank2Q8C8R3 3898 aa5.04□□□□□ -1.6
Limch1-204ENSMUST00000118242 Krtap19-9aF8WH65 55 aa5.02□□□□□ -1.61
Limch1-204ENSMUST00000118242 Svep1A2AVA0 3567 aa5.02□□□□□ -1.61
Limch1-204ENSMUST00000118242 Krtap1-4Q3V2D6 188 aa5.02□□□□□ -1.61
Limch1-204ENSMUST00000118242 Krtap12-1Q9Z287 130 aa4.95□□□□□ -1.62
Limch1-204ENSMUST00000118242 Dnah10D3YYQ8 4591 aa4.92□□□□□ -1.62
Limch1-204ENSMUST00000118242 Muc4Q8JZM8 3443 aa4.91□□□□□ -1.62
Limch1-204ENSMUST00000118242 Dnah14A0A140LIJ4 4489 aa4.9□□□□□ -1.63
Limch1-204ENSMUST00000118242 Gm6358A0A087WPH4 74 aa4.89□□□□□ -1.63
Limch1-204ENSMUST00000118242 Dnah5Q8VHE6 4621 aa4.87□□□□□ -1.63
Limch1-204ENSMUST00000118242 Muc6Q80T03 2850 aa4.84□□□□□ -1.64
Limch1-204ENSMUST00000118242 2310046K23RikA0A0A6YVW6 87 aa4.83□□□□□ -1.64
Limch1-204ENSMUST00000118242 Dnah17Q69Z23 4481 aa4.82□□□□□ -1.64
Limch1-204ENSMUST00000118242 Huwe1Q7TMY8 4377 aaKnown RBP4.82□□□□□ -1.64
Limch1-204ENSMUST00000118242 LystP97412 3788 aa4.81□□□□□ -1.64
Limch1-204ENSMUST00000118242 Stard9Q80TF6 4561 aa4.78□□□□□ -1.64
Limch1-204ENSMUST00000118242 Vps13dB1ART2 4390 aa4.74□□□□□ -1.65
Limch1-204ENSMUST00000118242 Csmd2V9GX34 3611 aa4.72□□□□□ -1.65
Limch1-204ENSMUST00000118242 Krtap8-1O08633 61 aa4.71□□□□□ -1.66
Limch1-204ENSMUST00000118242 Hspg2Q05793 3707 aaKnown RBP4.71□□□□□ -1.66
Limch1-204ENSMUST00000118242 Dnah11E9Q7N9 4488 aa4.65□□□□□ -1.67
Limch1-204ENSMUST00000118242 PlecQ9QXS1 4691 aaKnown RBP4.64□□□□□ -1.67
Limch1-204ENSMUST00000118242 Csmd3Q80T79 3707 aa4.62□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 71.4 ms