RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Krtap10-4Q08EG8 221 aa5.47□□□□□ -1.53
Col28a1-201ENSMUST00000115537 2310050C09RikG5E8Z3 280 aa5.46□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Odf3bQ5M8M2 238 aa5.43□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Defb9Q8R2I6 67 aa5.43□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Gm21798J3QNU5 87 aa5.43□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Gpr15lA0A0B4J1N3 78 aa5.41□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Gm27235Q3UW50 83 aa5.41□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Sprr1aQ62266 144 aa5.4□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Spaca4Q80ZQ0 127 aa5.4□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Gm2310J3QNJ2 377 aa5.4□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Gm10139O88245 57 aa5.39□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Cypt14J3QPF7 87 aa5.39□□□□□ -1.55
Col28a1-201ENSMUST00000115537 6030445D17RikE9Q8F9 148 aa5.37□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Anapc11Q9CPX9 84 aa5.37□□□□□ -1.55
Col28a1-201ENSMUST00000115537 2310034C09RikQ9D746 214 aa5.37□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Krtap10-10A0A1W2P7T6 217 aa5.37□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Krtap13O88375 197 aa5.37□□□□□ -1.55
Col28a1-201ENSMUST00000115537 4930507D05RikQ8C9C9 103 aa5.36□□□□□ -1.55
Col28a1-201ENSMUST00000115537 2310061N02RikQ9D6S9 174 aa5.34□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Gm10065F6TJM2 114 aa5.32□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Pla2g10Q9QXX3 151 aa5.32□□□□□ -1.56
Col28a1-201ENSMUST00000115537 LystP97412 3788 aa5.32□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Gm17606F6ZL36 78 aa5.31□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Gm3880A0A1B0GSB3 72 aa5.3□□□□□ -1.56
Col28a1-201ENSMUST00000115537 CubnQ9JLB4 3623 aa5.29□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Gm2696A0A1W2P709 240 aa5.29□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Ank2Q8C8R3 3898 aa5.28□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Gm20538F6Z9R1 75 aa5.28□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Gm21887J3QQ04 176 aa5.27□□□□□ -1.57
Col28a1-201ENSMUST00000115537 Rnase13Q5GAM7 153 aa5.27□□□□□ -1.57
Col28a1-201ENSMUST00000115537 NbdyA0A0N4SUI7 68 aa5.26□□□□□ -1.57
Col28a1-201ENSMUST00000115537 CriptO70333 101 aa5.23□□□□□ -1.57
Col28a1-201ENSMUST00000115537 Gm16253D3Z167 63 aa5.19□□□□□ -1.58
Col28a1-201ENSMUST00000115537 Tnp2P11378 117 aa5.13□□□□□ -1.59
Col28a1-201ENSMUST00000115537 Romo1P60603 79 aa5.13□□□□□ -1.59
Col28a1-201ENSMUST00000115537 Krtap29-1A2A5X4 342 aa5.12□□□□□ -1.59
Col28a1-201ENSMUST00000115537 Krtap14O08640 167 aa5.08□□□□□ -1.6
Col28a1-201ENSMUST00000115537 Gm9955Q8CEJ8 102 aa5.03□□□□□ -1.6
Col28a1-201ENSMUST00000115537 Sec61bQ9CQS8 96 aaKnown RBP5.02□□□□□ -1.61
Col28a1-201ENSMUST00000115537 Gm4491E0CX42 125 aa5.01□□□□□ -1.61
Col28a1-201ENSMUST00000115537 Xirp2Q4U4S6 3784 aa5.01□□□□□ -1.61
Col28a1-201ENSMUST00000115537 BsnO88737 3942 aa5□□□□□ -1.61
Col28a1-201ENSMUST00000115537 Krtap15-1Q9QZU5 150 aa4.97□□□□□ -1.61
Col28a1-201ENSMUST00000115537 Gm9918Q8BUR5 174 aa4.96□□□□□ -1.62
Col28a1-201ENSMUST00000115537 D6Ertd527eA0A0N4SWI3 464 aa4.95□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Ndufaf8A2AMZ4 74 aa4.95□□□□□ -1.62
Col28a1-201ENSMUST00000115537 TnxbO35452 4006 aa4.95□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Gm20537G3UYK7 97 aa4.94□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Hspg2Q05793 3707 aaKnown RBP4.93□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Gm10382Q3V0T5 144 aa4.93□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Rpl37Q9D823 97 aa4.93□□□□□ -1.62
Col28a1-201ENSMUST00000115537 2310079G19RikQ9D6L6 185 aa4.92□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Dnah14A0A140LIJ4 4489 aa4.9□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Prm2P07978 107 aa4.89□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Cox6b2Q80ZN9 88 aa4.87□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Dnah10D3YYQ8 4591 aa4.87□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Gm5767A0A0J9YTU8 78 aa4.85□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Ryr1E9PZQ0 5035 aa4.85□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Gm9112A2AI92 75 aa4.79□□□□□ -1.64
Col28a1-201ENSMUST00000115537 A930033H14RikG5E8X6 103 aa4.79□□□□□ -1.64
Col28a1-201ENSMUST00000115537 Gm5965D3Z724 196 aa4.79□□□□□ -1.64
Col28a1-201ENSMUST00000115537 Spink7Q6IE32 76 aa4.76□□□□□ -1.65
Col28a1-201ENSMUST00000115537 Fam229aB2KGE5 128 aa4.75□□□□□ -1.65
Col28a1-201ENSMUST00000115537 Gm9736A0A1W2P7N1 277 aa4.72□□□□□ -1.65
Col28a1-201ENSMUST00000115537 Huwe1Q7TMY8 4377 aaKnown RBP4.69□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Gm19426M0QWC7 77 aa4.68□□□□□ -1.66
Col28a1-201ENSMUST00000115537 2310057N15RikQ9D6T8 200 aa4.68□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Csmd3Q80T79 3707 aa4.68□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Rps29P62274 56 aa4.68□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Krtap3-2Q9D638 99 aa4.65□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Krtap3-3Q9D7P0 99 aa4.65□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Krtap19-5O08632 62 aa4.65□□□□□ -1.67
Col28a1-201ENSMUST00000115537 Ryr3A2AGL3 4863 aa4.6□□□□□ -1.67
Col28a1-201ENSMUST00000115537 Camk2n1Q6QWF9 78 aa4.59□□□□□ -1.67
Col28a1-201ENSMUST00000115537 PlecQ9QXS1 4691 aaKnown RBP4.58□□□□□ -1.68
Col28a1-201ENSMUST00000115537 BC029722A0A0N4SW31 51 aa4.58□□□□□ -1.68
Col28a1-201ENSMUST00000115537 Gm11939A2A592 99 aa4.57□□□□□ -1.68
Col28a1-201ENSMUST00000115537 Dnah11E9Q7N9 4488 aa4.52□□□□□ -1.69
Col28a1-201ENSMUST00000115537 Dnah5Q8VHE6 4621 aa4.52□□□□□ -1.69
Col28a1-201ENSMUST00000115537 PrkdcP97313 4128 aa4.51□□□□□ -1.69
Col28a1-201ENSMUST00000115537 Dnah7bL7N1Y0 4068 aa4.51□□□□□ -1.69
Col28a1-201ENSMUST00000115537 Kmt2aP55200 3966 aa4.48□□□□□ -1.69
Col28a1-201ENSMUST00000115537 Vps13dB1ART2 4390 aa4.47□□□□□ -1.69
Col28a1-201ENSMUST00000115537 Gm40193A0A1B0GT39 78 aa4.46□□□□□ -1.7
Col28a1-201ENSMUST00000115537 2210017I01RikA0A0A6YVV1 95 aa4.46□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Stard9Q80TF6 4561 aa4.45□□□□□ -1.7
Col28a1-201ENSMUST00000115537 B930094E09RikQ8C4T2 136 aa4.45□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Dnah3Q8BW94 4083 aa4.44□□□□□ -1.7
Col28a1-201ENSMUST00000115537 HydinQ80W93 5154 aa4.42□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Kiaa1109A2AAE1 5005 aa4.42□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Dnah6E9Q0B6 4144 aa4.42□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Dnah17Q69Z23 4481 aa4.42□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Herc2Q4U2R1 4836 aa4.41□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Gm18596A0A1W2P860 280 aa4.4□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Mycbp2Q7TPH6 4711 aa4.4□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Crct1Q6PAI5 102 aa4.4□□□□□ -1.71
Col28a1-201ENSMUST00000115537 Dnah9B1AR51 4484 aa4.4□□□□□ -1.71
Col28a1-201ENSMUST00000115537 Fras1Q80T14 4010 aa4.39□□□□□ -1.71
Col28a1-201ENSMUST00000115537 Gm10318A0A1W2P728 225 aa4.39□□□□□ -1.71
Col28a1-201ENSMUST00000115537 Dnah1E9Q8T7 4250 aa4.34□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms