RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Gm3233E9Q2H5 230 aa10,35□□□□□ -0,75
Trim71-201ENSMUST00000111816 Gm11565A2A4M7 156 aa10,34□□□□□ -0,75
Trim71-201ENSMUST00000111816 Lelp1Q9DAE3 120 aa10,34□□□□□ -0,75
Trim71-201ENSMUST00000111816 Gm9508A0A1W2P7W0 230 aa10,3□□□□□ -0,76
Trim71-201ENSMUST00000111816 Celsr1O35161 3034 aa10,28□□□□□ -0,76
Trim71-201ENSMUST00000111816 Megf8P60882 2789 aa10,27□□□□□ -0,77
Trim71-201ENSMUST00000111816 Gm7138L7N2C3 230 aa10,24□□□□□ -0,77
Trim71-201ENSMUST00000111816 Gm3238W4VSP7 230 aa10,24□□□□□ -0,77
Trim71-201ENSMUST00000111816 AspmQ8CJ27 3122 aa10,21□□□□□ -0,77
Trim71-201ENSMUST00000111816 HttP42859 3119 aa10,18□□□□□ -0,78
Trim71-201ENSMUST00000111816 Gm20537G3UYK7 97 aa10,16□□□□□ -0,78
Trim71-201ENSMUST00000111816 Col12a1Q60847 3120 aa10,16□□□□□ -0,78
Trim71-201ENSMUST00000111816 Celsr3Q91ZI0 3301 aa10,13□□□□□ -0,79
Trim71-201ENSMUST00000111816 Gm7137J3QMW1 236 aa10,08□□□□□ -0,8
Trim71-201ENSMUST00000111816 Myo15aQ9QZZ4 3511 aa10,07□□□□□ -0,8
Trim71-201ENSMUST00000111816 VwfQ8CIZ8 2813 aa10,06□□□□□ -0,8
Trim71-201ENSMUST00000111816 Lrrc37aB1AWG4 3215 aa10,03□□□□□ -0,8
Trim71-201ENSMUST00000111816 Tnp2P11378 117 aa9,97□□□□□ -0,81
Trim71-201ENSMUST00000111816 Zfhx3Q61329 3726 aa9,96□□□□□ -0,81
Trim71-201ENSMUST00000111816 B930094E09RikQ8C4T2 136 aa9,95□□□□□ -0,82
Trim71-201ENSMUST00000111816 Adgrg4B7ZCC9 3073 aa9,93□□□□□ -0,82
Trim71-201ENSMUST00000111816 Tenm2Q9WTS5 2764 aa9,91□□□□□ -0,82
Trim71-201ENSMUST00000111816 Dchs2A0A0A6YW72 3346 aa9,9□□□□□ -0,82
Trim71-201ENSMUST00000111816 Brca2P97929 3329 aa9,84□□□□□ -0,83
Trim71-201ENSMUST00000111816 Akap9Q70FJ1 3797 aa9,77□□□□□ -0,85
Trim71-201ENSMUST00000111816 Cdh23Q99PF4 3354 aa9,77□□□□□ -0,85
Trim71-201ENSMUST00000111816 Gm17416Q30KP4 66 aa9,75□□□□□ -0,85
Trim71-201ENSMUST00000111816 Gm36176A0A1W2P8D5 158 aa9,74□□□□□ -0,85
Trim71-201ENSMUST00000111816 Tenm4Q3UHK6 2771 aa9,69□□□□□ -0,86
Trim71-201ENSMUST00000111816 Helz2E9QAM5 2947 aaKnown RBP9,69□□□□□ -0,86
Trim71-201ENSMUST00000111816 4933428G20RikQ9D3X4 101 aa9,67□□□□□ -0,86
Trim71-201ENSMUST00000111816 2310061N02RikQ9D6S9 174 aa9,66□□□□□ -0,86
Trim71-201ENSMUST00000111816 SpegQ62407 3262 aa9,65□□□□□ -0,87
Trim71-201ENSMUST00000111816 Col6a3E9PWQ3 3284 aa9,64□□□□□ -0,87
Trim71-201ENSMUST00000111816 A930033H14RikG5E8X6 103 aa9,61□□□□□ -0,87
Trim71-201ENSMUST00000111816 VcanQ62059 3357 aa9,58□□□□□ -0,88
Trim71-201ENSMUST00000111816 OtogO55225 2910 aa9,55□□□□□ -0,88
Trim71-201ENSMUST00000111816 Gm17402F6Z0L5 76 aa9,54□□□□□ -0,88
Trim71-201ENSMUST00000111816 Szt2A2A9C3 3431 aa9,54□□□□□ -0,88
Trim71-201ENSMUST00000111816 2310079G19RikQ9D6L6 185 aa9,46□□□□□ -0,9
Trim71-201ENSMUST00000111816 Gm9507D3Z5T3 223 aa9,46□□□□□ -0,9
Trim71-201ENSMUST00000111816 DmdP11531 3678 aa9,45□□□□□ -0,9
Trim71-201ENSMUST00000111816 Fbn1Q61554 2873 aaKnown RBP9,35□□□□□ -0,91
Trim71-201ENSMUST00000111816 Krtap10-4Q08EG8 221 aa9,34□□□□□ -0,91
Trim71-201ENSMUST00000111816 Vps13cQ8BX70 3748 aa9,29□□□□□ -0,92
Trim71-201ENSMUST00000111816 SpenQ62504 3644 aaKnown RBP9,26□□□□□ -0,93
Trim71-201ENSMUST00000111816 Cmya5Q70KF4 3739 aa9,25□□□□□ -0,93
Trim71-201ENSMUST00000111816 Krtap10-10A0A1W2P7T6 217 aa9,23□□□□□ -0,93
Trim71-201ENSMUST00000111816 Dchs1E9PVD3 3291 aa9,15□□□□□ -0,95
Trim71-201ENSMUST00000111816 Col7a1Q63870 2944 aa9,14□□□□□ -0,95
Trim71-201ENSMUST00000111816 Wdfy3Q6VNB8 3508 aa9,12□□□□□ -0,95
Trim71-201ENSMUST00000111816 2210017I01RikA0A0A6YVV1 95 aa9,07□□□□□ -0,96
Trim71-201ENSMUST00000111816 Gm2696A0A1W2P709 240 aa9,01□□□□□ -0,97
Trim71-201ENSMUST00000111816 Gm19668J3QMD1 248 aa9□□□□□ -0,97
Trim71-201ENSMUST00000111816 Smg1Q8BKX6 3658 aaKnown RBP9□□□□□ -0,97
Trim71-201ENSMUST00000111816 Muc5acE9QAQ8 3455 aa8,9□□□□□ -0,99
Trim71-201ENSMUST00000111816 Gm9918Q8BUR5 174 aa8,88□□□□□ -0,99
Trim71-201ENSMUST00000111816 Ank2Q8C8R3 3898 aa8,83□□□□□ -1
Trim71-201ENSMUST00000111816 BsnO88737 3942 aa8,76□□□□□ -1,01
Trim71-201ENSMUST00000111816 Csmd1Q923L3 3564 aa8,75□□□□□ -1,01
Trim71-201ENSMUST00000111816 RelnQ60841 3461 aa8,74□□□□□ -1,01
Trim71-201ENSMUST00000111816 Lama5Q61001 3718 aa8,68□□□□□ -1,02
Trim71-201ENSMUST00000111816 Zfhx4Q9JJN2 3550 aa8,68□□□□□ -1,02
Trim71-201ENSMUST00000111816 Muc6Q80T03 2850 aa8,65□□□□□ -1,02
Trim71-201ENSMUST00000111816 Gm884A2A9H6 3643 aa8,59□□□□□ -1,03
Trim71-201ENSMUST00000111816 Krtap13-1Q8K198 168 aa8,55□□□□□ -1,04
Trim71-201ENSMUST00000111816 Csmd2V9GX34 3611 aa8,5□□□□□ -1,05
Trim71-201ENSMUST00000111816 LystP97412 3788 aa8,34□□□□□ -1,07
Trim71-201ENSMUST00000111816 Muc4Q8JZM8 3443 aa8,26□□□□□ -1,09
Trim71-201ENSMUST00000111816 Gm9736A0A1W2P7N1 277 aa8,23□□□□□ -1,09
Trim71-201ENSMUST00000111816 Csmd3Q80T79 3707 aa8,2□□□□□ -1,1
Trim71-201ENSMUST00000111816 Gm6358A0A087WPH4 74 aa8,2□□□□□ -1,1
Trim71-201ENSMUST00000111816 Gm18596A0A1W2P860 280 aa8,15□□□□□ -1,1
Trim71-201ENSMUST00000111816 Krtap7-1Q9D3I6 87 aa8,12□□□□□ -1,11
Trim71-201ENSMUST00000111816 Gm11939A2A592 99 aa8,06□□□□□ -1,12
Trim71-201ENSMUST00000111816 Krtap3-1A2A591 98 aa8,06□□□□□ -1,12
Trim71-201ENSMUST00000111816 Xirp2Q4U4S6 3784 aa7,97□□□□□ -1,13
Trim71-201ENSMUST00000111816 Gm19402J3QJV4 266 aa7,93□□□□□ -1,14
Trim71-201ENSMUST00000111816 Gm10318A0A1W2P728 225 aa7,9□□□□□ -1,14
Trim71-201ENSMUST00000111816 Krtap3-2Q9D638 99 aa7,85□□□□□ -1,15
Trim71-201ENSMUST00000111816 Krtap3-3Q9D7P0 99 aa7,85□□□□□ -1,15
Trim71-201ENSMUST00000111816 Crct1Q6PAI5 102 aa7,81□□□□□ -1,16
Trim71-201ENSMUST00000111816 CubnQ9JLB4 3623 aa7,8□□□□□ -1,16
Trim71-201ENSMUST00000111816 Hspg2Q05793 3707 aaKnown RBP7,79□□□□□ -1,16
Trim71-201ENSMUST00000111816 Svep1A2AVA0 3567 aa7,78□□□□□ -1,16
Trim71-201ENSMUST00000111816 Krtap8-1O08633 61 aa7,76□□□□□ -1,17
Trim71-201ENSMUST00000111816 Krtap19-9aF8WH65 55 aa7,73□□□□□ -1,17
Trim71-201ENSMUST00000111816 Sprr2a3Q4KL71 83 aa7,7□□□□□ -1,18
Trim71-201ENSMUST00000111816 Sprr2a1Q9CQK8 83 aa7,7□□□□□ -1,18
Trim71-201ENSMUST00000111816 Krtap19-9bQ99NG9 58 aa7,69□□□□□ -1,18
Trim71-201ENSMUST00000111816 Krtap19-5O08632 62 aa7,68□□□□□ -1,18
Trim71-201ENSMUST00000111816 Sprr2kO70562 68 aa7,64□□□□□ -1,19
Trim71-201ENSMUST00000111816 Dnah3Q8BW94 4083 aa7,61□□□□□ -1,19
Trim71-201ENSMUST00000111816 Vps13bQ80TY5 3993 aa7,6□□□□□ -1,19
Trim71-201ENSMUST00000111816 Krtap12-1Q9Z287 130 aa7,54□□□□□ -1,2
Trim71-201ENSMUST00000111816 Krtap1-5A2A590 122 aa7,5□□□□□ -1,21
Trim71-201ENSMUST00000111816 Sprr2gO70558 76 aa7,44□□□□□ -1,22
Trim71-201ENSMUST00000111816 Dnah7bL7N1Y0 4068 aa7,38□□□□□ -1,23
Trim71-201ENSMUST00000111816 Dnah7cA0A087WR13 4024 aa7,29□□□□□ -1,24
Trim71-201ENSMUST00000111816 Dnah7aE9Q0T8 4024 aa7,25□□□□□ -1,25
Retrieved 100 of 22,080 RNA–protein pairs in 9,2 ms